RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 TRIM37O94972 964 aa6.06□□□□□ -1.44
CCDC7-213ENST00000639290 SLC16A10Q8TF71 515 aa6.05□□□□□ -1.44
CCDC7-213ENST00000639290 CCDC141Q6ZP82 1450 aa6.05□□□□□ -1.44
CCDC7-213ENST00000639290 KIF15Q9NS87 1388 aa6.05□□□□□ -1.44
CCDC7-213ENST00000639290 ZBTB7AO95365 584 aa6.05□□□□□ -1.44
CCDC7-213ENST00000639290 STK32BQ9NY57 414 aa6.05□□□□□ -1.44
CCDC7-213ENST00000639290 KIF1AQ12756 1690 aa6.05□□□□□ -1.44
CCDC7-213ENST00000639290 SLC52A1Q9NWF4 448 aa6.04□□□□□ -1.44
CCDC7-213ENST00000639290 SPATA31A5Q5VU36 1347 aa6.04□□□□□ -1.44
CCDC7-213ENST00000639290 SPATA31A7Q8IWB4 1347 aa6.04□□□□□ -1.44
CCDC7-213ENST00000639290 RIMS2Q9UQ26 1411 aa6.04□□□□□ -1.44
CCDC7-213ENST00000639290 ADAMTS7Q9UKP4 1686 aa6.03□□□□□ -1.44
CCDC7-213ENST00000639290 BRD4O60885 1362 aaPredicted RBP6.03□□□□□ -1.44
CCDC7-213ENST00000639290 TOPAZ1Q8N9V7 1692 aa6.03□□□□□ -1.44
CCDC7-213ENST00000639290 ATF5Q9Y2D1 282 aaPredicted RBP6.03□□□□□ -1.44
CCDC7-213ENST00000639290 CCDC9Q9Y3X0 531 aaKnown RBP6.03□□□□□ -1.44
CCDC7-213ENST00000639290 BCL9O00512 1426 aa6.03□□□□□ -1.44
CCDC7-213ENST00000639290 FAM98CQ17RN3 349 aaKnown RBP6.02□□□□□ -1.45
CCDC7-213ENST00000639290 AIDAQ96BJ3 306 aa6.02□□□□□ -1.45
CCDC7-213ENST00000639290 RBM42Q9BTD8 480 aaKnown RBP6.02□□□□□ -1.45
CCDC7-213ENST00000639290 TNRC6CQ9HCJ0 1690 aaKnown RBP6.02□□□□□ -1.45
CCDC7-213ENST00000639290 A0A0G2JS52 829 aa6.02□□□□□ -1.45
CCDC7-213ENST00000639290 POLD1P28340 1107 aa6.02□□□□□ -1.45
CCDC7-213ENST00000639290 MYT1Q01538 1121 aa6.02□□□□□ -1.45
CCDC7-213ENST00000639290 CCDC144AA2RUR9 1427 aa6.02□□□□□ -1.45
CCDC7-213ENST00000639290 PTPRUQ92729 1446 aa6.02□□□□□ -1.45
CCDC7-213ENST00000639290 BCANQ96GW7 911 aa6.01□□□□□ -1.45
CCDC7-213ENST00000639290 AMOTL2Q9Y2J4 779 aa6.01□□□□□ -1.45
CCDC7-213ENST00000639290 HFM1A2PYH4 1435 aa6.01□□□□□ -1.45
CCDC7-213ENST00000639290 CDC42BPGQ6DT37 1551 aa6.01□□□□□ -1.45
CCDC7-213ENST00000639290 LRRIQ1Q96JM4 1722 aa6.01□□□□□ -1.45
CCDC7-213ENST00000639290 PAPPAQ13219 1627 aa6.01□□□□□ -1.45
CCDC7-213ENST00000639290 SLC15A2Q16348 729 aa6.01□□□□□ -1.45
CCDC7-213ENST00000639290 C16orf71Q8IYS4 520 aaPredicted RBP6.01□□□□□ -1.45
CCDC7-213ENST00000639290 PEAK1Q9H792 1746 aa6.01□□□□□ -1.45
CCDC7-213ENST00000639290 ANO8Q9HCE9 1232 aaPredicted RBP6.01□□□□□ -1.45
CCDC7-213ENST00000639290 PLEKHG2Q9H7P9 1386 aa6.01□□□□□ -1.45
CCDC7-213ENST00000639290 YBX3P16989 372 aaKnown RBP eCLIP6□□□□□ -1.45
CCDC7-213ENST00000639290 POLA2Q14181 598 aa6□□□□□ -1.45
CCDC7-213ENST00000639290 SMC1BQ8NDV3 1235 aa6□□□□□ -1.45
CCDC7-213ENST00000639290 DDX17Q92841 729 aaKnown RBP6□□□□□ -1.45
CCDC7-213ENST00000639290 SPATA31A3Q5VYP0 1347 aa6□□□□□ -1.45
CCDC7-213ENST00000639290 DUOX2Q9NRD8 1548 aa6□□□□□ -1.45
CCDC7-213ENST00000639290 PARP4Q9UKK3 1724 aaKnown RBP6□□□□□ -1.45
CCDC7-213ENST00000639290 MNX1P50219 401 aaPredicted RBP5.99□□□□□ -1.45
CCDC7-213ENST00000639290 FOXN1O15353 648 aa5.99□□□□□ -1.45
CCDC7-213ENST00000639290 IDI1Q13907 227 aa5.99□□□□□ -1.45
CCDC7-213ENST00000639290 AMER1Q5JTC6 1135 aaPredicted RBP5.99□□□□□ -1.45
CCDC7-213ENST00000639290 BARGINQ6ZT62 677 aa5.99□□□□□ -1.45
CCDC7-213ENST00000639290 SP7Q8TDD2 431 aaPredicted RBP5.99□□□□□ -1.45
CCDC7-213ENST00000639290 ARHGEF10O15013 1369 aa5.98□□□□□ -1.45
CCDC7-213ENST00000639290 CCDC85CA6NKD9 419 aa5.98□□□□□ -1.45
CCDC7-213ENST00000639290 PELP1Q8IZL8 1130 aaKnown RBP5.98□□□□□ -1.45
CCDC7-213ENST00000639290 CFDP1Q9UEE9 299 aaPredicted RBP5.98□□□□□ -1.45
CCDC7-213ENST00000639290 ZBTB12Q9Y330 459 aaPredicted RBP5.98□□□□□ -1.45
CCDC7-213ENST00000639290 IQGAP3Q86VI3 1631 aa5.98□□□□□ -1.45
CCDC7-213ENST00000639290 SBF2Q86WG5 1849 aa5.98□□□□□ -1.45
CCDC7-213ENST00000639290 GCC2Q8IWJ2 1684 aa5.98□□□□□ -1.45
CCDC7-213ENST00000639290 SBNO1A3KN83 1393 aa5.97□□□□□ -1.45
CCDC7-213ENST00000639290 ZNF777Q9ULD5 760 aaPredicted RBP5.97□□□□□ -1.45
CCDC7-213ENST00000639290 TNS3Q68CZ2 1445 aa5.97□□□□□ -1.45
CCDC7-213ENST00000639290 ATP7BP35670 1465 aa5.97□□□□□ -1.45
CCDC7-213ENST00000639290 CHGAP10645 457 aaKnown RBP5.97□□□□□ -1.45
CCDC7-213ENST00000639290 ZNF526Q8TF50 670 aaPredicted RBP5.97□□□□□ -1.45
CCDC7-213ENST00000639290 BCL11BQ9C0K0 894 aaPredicted RBP5.97□□□□□ -1.45
CCDC7-213ENST00000639290 RTN4Q9NQC3 1192 aaKnown RBP5.97□□□□□ -1.45
CCDC7-213ENST00000639290 OVOS2A0A0G2JMS6 1433 aa5.97□□□□□ -1.45
CCDC7-213ENST00000639290 OVOS2A0A0J9YW53 1432 aa5.97□□□□□ -1.45
CCDC7-213ENST00000639290 OVOS2Q6IE36 1432 aa5.97□□□□□ -1.45
CCDC7-213ENST00000639290 CCNB3Q8WWL7 1395 aa5.97□□□□□ -1.45
CCDC7-213ENST00000639290 IGSF5Q9NSI5 407 aa5.96□□□□□ -1.45
CCDC7-213ENST00000639290 CD2APQ9Y5K6 639 aa5.96□□□□□ -1.46
CCDC7-213ENST00000639290 SPATA31A1Q5TZJ5 1347 aa5.96□□□□□ -1.46
CCDC7-213ENST00000639290 CFAP65Q6ZU64 1925 aaKnown RBP5.96□□□□□ -1.46
CCDC7-213ENST00000639290 VIRMAQ69YN4 1812 aaKnown RBP5.95□□□□□ -1.46
CCDC7-213ENST00000639290 HABP4Q5JVS0 413 aaKnown RBP5.95□□□□□ -1.46
CCDC7-213ENST00000639290 MPNDQ8N594 471 aa5.95□□□□□ -1.46
CCDC7-213ENST00000639290 NRXN3Q9Y4C0 1643 aa5.95□□□□□ -1.46
CCDC7-213ENST00000639290 ERBINQ96RT1 1412 aa5.95□□□□□ -1.46
CCDC7-213ENST00000639290 PDE3BQ13370 1112 aa5.95□□□□□ -1.46
CCDC7-213ENST00000639290 KANK1Q14678 1352 aa5.95□□□□□ -1.46
CCDC7-213ENST00000639290 CASKIN1Q8WXD9 1431 aa5.94□□□□□ -1.46
CCDC7-213ENST00000639290 ATXN8OSP0DMR3 200 aa5.94□□□□□ -1.46
CCDC7-213ENST00000639290 HSPA8P11142 646 aaKnown RBP5.94□□□□□ -1.46
CCDC7-213ENST00000639290 CHRDL2Q6WN34 429 aa5.94□□□□□ -1.46
CCDC7-213ENST00000639290 ORAI2Q96SN7 254 aa5.94□□□□□ -1.46
CCDC7-213ENST00000639290 PDGFDQ9GZP0 370 aaPredicted RBP5.94□□□□□ -1.46
CCDC7-213ENST00000639290 MYO5BQ9ULV0 1848 aa5.94□□□□□ -1.46
CCDC7-213ENST00000639290 THSD7BQ9C0I4 1608 aa5.93□□□□□ -1.46
CCDC7-213ENST00000639290 WBP1LQ9NX94 342 aa5.93□□□□□ -1.46
CCDC7-213ENST00000639290 THRAP3Q9Y2W1 955 aaKnown RBP5.93□□□□□ -1.46
CCDC7-213ENST00000639290 KDM2BQ8NHM5 1336 aa5.93□□□□□ -1.46
CCDC7-213ENST00000639290 HTRA3P83110 453 aa5.93□□□□□ -1.46
CCDC7-213ENST00000639290 CREBZFQ9NS37 354 aa5.93□□□□□ -1.46
CCDC7-213ENST00000639290 HAP1P54257 671 aaPredicted RBP5.92□□□□□ -1.46
CCDC7-213ENST00000639290 CNTNAP1P78357 1384 aa5.92□□□□□ -1.46
CCDC7-213ENST00000639290 FAM182BQ5T319 152 aa5.92□□□□□ -1.46
CCDC7-213ENST00000639290 NLGN2Q8NFZ4 835 aa5.92□□□□□ -1.46
CCDC7-213ENST00000639290 PKD1L3Q7Z443 1732 aa5.92□□□□□ -1.46
CCDC7-213ENST00000639290 PSME1Q06323 249 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms