RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 PLEKHG3A1L390 1219 aa9.28□□□□□ -0.92
CCDC7-211ENST00000638889 LINC01559Q495D7 138 aa9.28□□□□□ -0.92
CCDC7-211ENST00000638889 WFS1O76024 890 aa9.27□□□□□ -0.93
CCDC7-211ENST00000638889 CTHP32929 405 aa9.27□□□□□ -0.93
CCDC7-211ENST00000638889 MYSM1Q5VVJ2 828 aa9.27□□□□□ -0.93
CCDC7-211ENST00000638889 SLC24A3Q9HC58 644 aa9.27□□□□□ -0.93
CCDC7-211ENST00000638889 F12P00748 615 aaPredicted RBP9.26□□□□□ -0.93
CCDC7-211ENST00000638889 SNRPBP14678 240 aaKnown RBP9.26□□□□□ -0.93
CCDC7-211ENST00000638889 CAPN5O15484 640 aaPredicted RBP9.25□□□□□ -0.93
CCDC7-211ENST00000638889 NFX1Q12986 1120 aaKnown RBP9.24□□□□□ -0.93
CCDC7-211ENST00000638889 CABLES1Q8TDN4 633 aa9.24□□□□□ -0.93
CCDC7-211ENST00000638889 LIMD1Q9UGP4 676 aa9.24□□□□□ -0.93
CCDC7-211ENST00000638889 NUTM2BA6NNL0 878 aaPredicted RBP9.23□□□□□ -0.93
CCDC7-211ENST00000638889 NUTM2EB1AL46 878 aaPredicted RBP9.23□□□□□ -0.93
CCDC7-211ENST00000638889 LILRB3O75022 631 aa9.23□□□□□ -0.93
CCDC7-211ENST00000638889 CSPP1Q1MSJ5 1256 aa9.23□□□□□ -0.93
CCDC7-211ENST00000638889 NUTM2DQ5VT03 806 aaPredicted RBP9.23□□□□□ -0.93
CCDC7-211ENST00000638889 NUTM2AQ8IVF1 878 aaPredicted RBP9.23□□□□□ -0.93
CCDC7-211ENST00000638889 FAM174AQ8TBP5 190 aa9.23□□□□□ -0.93
CCDC7-211ENST00000638889 RSPH6AQ9H0K4 717 aa9.23□□□□□ -0.93
CCDC7-211ENST00000638889 TLL2Q9Y6L7 1015 aa9.23□□□□□ -0.93
CCDC7-211ENST00000638889 MAP10Q9P2G4 905 aa9.22□□□□□ -0.93
CCDC7-211ENST00000638889 QPCTQ16769 361 aa9.21□□□□□ -0.94
CCDC7-211ENST00000638889 ARMC2Q8NEN0 867 aa9.21□□□□□ -0.94
CCDC7-211ENST00000638889 TERTO14746 1132 aaKnown RBP9.2□□□□□ -0.94
CCDC7-211ENST00000638889 NNTQ13423 1086 aa9.2□□□□□ -0.94
CCDC7-211ENST00000638889 TRIM46Q7Z4K8 759 aa9.2□□□□□ -0.94
CCDC7-211ENST00000638889 HELBQ8NG08 1087 aaPredicted RBP9.2□□□□□ -0.94
CCDC7-211ENST00000638889 CDK15Q96Q40 435 aa9.2□□□□□ -0.94
CCDC7-211ENST00000638889 PER1O15534 1290 aaPredicted RBP9.19□□□□□ -0.94
CCDC7-211ENST00000638889 CLK2P49760 499 aaKnown RBP9.19□□□□□ -0.94
CCDC7-211ENST00000638889 BPHLQ86WA6 291 aaPredicted RBP9.19□□□□□ -0.94
CCDC7-211ENST00000638889 WIPF1O43516 503 aa9.18□□□□□ -0.94
CCDC7-211ENST00000638889 ADH1CP00326 375 aa9.18□□□□□ -0.94
CCDC7-211ENST00000638889 TSC1Q92574 1164 aa9.18□□□□□ -0.94
CCDC7-211ENST00000638889 FOXJ1Q92949 421 aa9.18□□□□□ -0.94
CCDC7-211ENST00000638889 BMP1P13497 986 aa9.17□□□□□ -0.94
CCDC7-211ENST00000638889 AGERQ15109 404 aa9.16□□□□□ -0.94
CCDC7-211ENST00000638889 RTL5Q5HYW3 569 aaPredicted RBP9.16□□□□□ -0.94
CCDC7-211ENST00000638889 NPAS3Q8IXF0 933 aa9.16□□□□□ -0.94
CCDC7-211ENST00000638889 TIMP2P16035 220 aa9.15□□□□□ -0.94
CCDC7-211ENST00000638889 WDR4P57081 412 aaKnown RBP9.15□□□□□ -0.94
CCDC7-211ENST00000638889 NR5A1Q13285 461 aa9.15□□□□□ -0.94
CCDC7-211ENST00000638889 NBPF14Q5TI25 921 aa9.15□□□□□ -0.94
CCDC7-211ENST00000638889 KLF16Q9BXK1 252 aaPredicted RBP9.15□□□□□ -0.94
CCDC7-211ENST00000638889 INSM1Q01101 510 aaPredicted RBP9.14□□□□□ -0.95
CCDC7-211ENST00000638889 ARID5BQ14865 1188 aa9.14□□□□□ -0.95
CCDC7-211ENST00000638889 C4orf48Q5BLP8 95 aa9.14□□□□□ -0.95
CCDC7-211ENST00000638889 SLC16A10Q8TF71 515 aa9.14□□□□□ -0.95
CCDC7-211ENST00000638889 ZFP42Q96MM3 310 aa9.14□□□□□ -0.95
CCDC7-211ENST00000638889 NXF1Q9UBU9 619 aaKnown RBP9.14□□□□□ -0.95
CCDC7-211ENST00000638889 SCARF1Q14162 830 aa9.13□□□□□ -0.95
CCDC7-211ENST00000638889 MRPL14Q6P1L8 145 aaKnown RBP9.13□□□□□ -0.95
CCDC7-211ENST00000638889 SH3RF1Q7Z6J0 888 aa9.13□□□□□ -0.95
CCDC7-211ENST00000638889 GPKOWQ92917 476 aaPredicted RBP eCLIP9.13□□□□□ -0.95
CCDC7-211ENST00000638889 POLR3EQ9NVU0 708 aa9.13□□□□□ -0.95
CCDC7-211ENST00000638889 C1QTNF2Q9BXJ5 285 aa9.12□□□□□ -0.95
CCDC7-211ENST00000638889 GRM5P41594 1212 aa9.11□□□□□ -0.95
CCDC7-211ENST00000638889 SKIV2LQ15477 1246 aaKnown RBP9.11□□□□□ -0.95
CCDC7-211ENST00000638889 SH3BP5LQ7L8J4 393 aa9.11□□□□□ -0.95
CCDC7-211ENST00000638889 TRMT44Q8IYL2 757 aaKnown RBP9.11□□□□□ -0.95
CCDC7-211ENST00000638889 MAP4K5Q9Y4K4 846 aa9.11□□□□□ -0.95
CCDC7-211ENST00000638889 LCE2CQ5TA81 110 aa9.1□□□□□ -0.95
CCDC7-211ENST00000638889 DDRGK1Q96HY6 314 aa9.1□□□□□ -0.95
CCDC7-211ENST00000638889 ZIC2O95409 532 aaPredicted RBP9.09□□□□□ -0.95
CCDC7-211ENST00000638889 SH3D19Q5HYK7 790 aa9.09□□□□□ -0.95
CCDC7-211ENST00000638889 STK17AQ9UEE5 414 aa9.09□□□□□ -0.95
CCDC7-211ENST00000638889 NR3C2P08235 984 aa9.08□□□□□ -0.96
CCDC7-211ENST00000638889 CTDSPL2Q05D32 466 aa9.08□□□□□ -0.96
CCDC7-211ENST00000638889 BCANQ96GW7 911 aa9.08□□□□□ -0.96
CCDC7-211ENST00000638889 ITPKCQ96DU7 683 aa9.07□□□□□ -0.96
CCDC7-211ENST00000638889 PURBQ96QR8 312 aaKnown RBP9.07□□□□□ -0.96
CCDC7-211ENST00000638889 KDM4CQ9H3R0 1056 aa9.07□□□□□ -0.96
CCDC7-211ENST00000638889 PPP2R2DQ66LE6 453 aa9.06□□□□□ -0.96
CCDC7-211ENST00000638889 PDXDC2PQ6P474 469 aa9.06□□□□□ -0.96
CCDC7-211ENST00000638889 VASH1Q7L8A9 365 aaPredicted RBP9.06□□□□□ -0.96
CCDC7-211ENST00000638889 IRF7Q92985 503 aa9.06□□□□□ -0.96
CCDC7-211ENST00000638889 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.06□□□□□ -0.96
CCDC7-211ENST00000638889 ZFAND3Q9H8U3 227 aa9.06□□□□□ -0.96
CCDC7-211ENST00000638889 H3BM21 787 aa9.05□□□□□ -0.96
CCDC7-211ENST00000638889 ZC3H4Q9UPT8 1303 aaKnown RBP9.05□□□□□ -0.96
CCDC7-211ENST00000638889 MAGEB6P1A0A0J9YX57 407 aa9.04□□□□□ -0.96
CCDC7-211ENST00000638889 UPP2O95045 317 aa9.04□□□□□ -0.96
CCDC7-211ENST00000638889 MEIOBQ8N635 442 aa9.04□□□□□ -0.96
CCDC7-211ENST00000638889 FAM117AQ9C073 453 aa9.04□□□□□ -0.96
CCDC7-211ENST00000638889 GPBP1L1Q9HC44 474 aaPredicted RBP9.04□□□□□ -0.96
CCDC7-211ENST00000638889 EMILIN1Q9Y6C2 1016 aa9.04□□□□□ -0.96
CCDC7-211ENST00000638889 FSHRP23945 695 aa9.03□□□□□ -0.96
CCDC7-211ENST00000638889 FKBPLQ9UIM3 349 aa9.03□□□□□ -0.96
CCDC7-211ENST00000638889 CDV3Q9UKY7 258 aaKnown RBP9.03□□□□□ -0.96
CCDC7-211ENST00000638889 ERFEQ4G0M1 354 aa9.02□□□□□ -0.97
CCDC7-211ENST00000638889 CCDC116Q8IYX3 515 aa9.02□□□□□ -0.97
CCDC7-211ENST00000638889 PROCA1Q8NCQ7 364 aaPredicted RBP9.02□□□□□ -0.97
CCDC7-211ENST00000638889 LRRN4Q8WUT4 740 aa9.02□□□□□ -0.97
CCDC7-211ENST00000638889 CARD14Q9BXL6 1004 aa9.02□□□□□ -0.97
CCDC7-211ENST00000638889 LINC00528Q8N1L1 170 aa9.01□□□□□ -0.97
CCDC7-211ENST00000638889 ARHGAP9Q9BRR9 750 aa9.01□□□□□ -0.97
CCDC7-211ENST00000638889 BMP2P12643 396 aa9□□□□□ -0.97
CCDC7-211ENST00000638889 GMPRP36959 345 aa9□□□□□ -0.97
CCDC7-211ENST00000638889 C6orf118Q5T5N4 469 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 596.8 ms