RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 ERCC4Q92889 916 aaPredicted RBP22.12■■□□□ 1.13
SCARB2-213ENST00000638680 PDCP20941 246 aa22.12■■□□□ 1.13
SCARB2-213ENST00000638680 CCDC184Q52MB2 194 aa22.12■■□□□ 1.13
SCARB2-213ENST00000638680 FGD5Q6ZNL6 1462 aa22.12■■□□□ 1.13
SCARB2-213ENST00000638680 CCDC30Q5VVM6 783 aa22.12■■□□□ 1.13
SCARB2-213ENST00000638680 BRMS1Q9HCU9 246 aa22.11■■□□□ 1.13
SCARB2-213ENST00000638680 DNAJC2Q99543 621 aaKnown RBP22.11■■□□□ 1.13
SCARB2-213ENST00000638680 CCP110O43303 1012 aa22.1■■□□□ 1.13
SCARB2-213ENST00000638680 NBPF1Q3BBV0 1214 aa22.1■■□□□ 1.13
SCARB2-213ENST00000638680 CASKIN1Q8WXD9 1431 aa22.1■■□□□ 1.13
SCARB2-213ENST00000638680 UQCRHLA0A096LP55 91 aa22.09■■□□□ 1.13
SCARB2-213ENST00000638680 UQCRHP07919 91 aa22.09■■□□□ 1.13
SCARB2-213ENST00000638680 NBPF8Q3BBV2 869 aa22.09■■□□□ 1.13
SCARB2-213ENST00000638680 PRDM2Q13029 1718 aa22.09■■□□□ 1.13
SCARB2-213ENST00000638680 FYB1O15117 783 aa22.09■■□□□ 1.13
SCARB2-213ENST00000638680 CCDC192P0DO97 292 aa22.09■■□□□ 1.13
SCARB2-213ENST00000638680 MCM4P33991 863 aa22.08■■□□□ 1.13
SCARB2-213ENST00000638680 CFAP70Q5T0N1 1121 aa22.08■■□□□ 1.13
SCARB2-213ENST00000638680 GNAI2P04899 355 aa22.08■■□□□ 1.13
SCARB2-213ENST00000638680 SYTL4Q96C24 671 aaPredicted RBP22.08■■□□□ 1.13
SCARB2-213ENST00000638680 H0YHG0 523 aa22.08■■□□□ 1.13
SCARB2-213ENST00000638680 ZNF396Q96N95 335 aaPredicted RBP22.08■■□□□ 1.13
SCARB2-213ENST00000638680 GAPVD1Q14C86 1478 aa22.07■■□□□ 1.12
SCARB2-213ENST00000638680 XBP1P17861 261 aa22.07■■□□□ 1.12
SCARB2-213ENST00000638680 RRP12Q5JTH9 1297 aaKnown RBP22.07■■□□□ 1.12
SCARB2-213ENST00000638680 MVPQ14764 893 aaKnown RBP22.07■■□□□ 1.12
SCARB2-213ENST00000638680 HIP1O00291 1037 aa22.07■■□□□ 1.12
SCARB2-213ENST00000638680 NUTM2GQ5VZR2 741 aa22.07■■□□□ 1.12
SCARB2-213ENST00000638680 WDR33Q9C0J8 1336 aaKnown RBP22.06■■□□□ 1.12
SCARB2-213ENST00000638680 ATP2B1P20020 1258 aa22.06■■□□□ 1.12
SCARB2-213ENST00000638680 RAD54L2Q9Y4B4 1467 aa22.06■■□□□ 1.12
SCARB2-213ENST00000638680 EPS15P42566 896 aa22.05■■□□□ 1.12
SCARB2-213ENST00000638680 STK38Q15208 465 aa22.05■■□□□ 1.12
SCARB2-213ENST00000638680 TNMDQ9H2S6 317 aa22.05■■□□□ 1.12
SCARB2-213ENST00000638680 OFD1O75665 1012 aa22.05■■□□□ 1.12
SCARB2-213ENST00000638680 CHD1LQ86WJ1 897 aa22.05■■□□□ 1.12
SCARB2-213ENST00000638680 RAPGEF4Q8WZA2 1011 aa22.05■■□□□ 1.12
SCARB2-213ENST00000638680 ESPNB1AK53 854 aa22.05■■□□□ 1.12
SCARB2-213ENST00000638680 BRPF1P55201 1214 aaPredicted RBP22.04■■□□□ 1.12
SCARB2-213ENST00000638680 CTDP1Q9Y5B0 961 aaPredicted RBP22.04■■□□□ 1.12
SCARB2-213ENST00000638680 CYP46A1Q9Y6A2 500 aa22.04■■□□□ 1.12
SCARB2-213ENST00000638680 CT47A1Q5JQC4 288 aaPredicted RBP22.04■■□□□ 1.12
SCARB2-213ENST00000638680 SMARCE1Q969G3 411 aa22.04■■□□□ 1.12
SCARB2-213ENST00000638680 STK3Q13188 491 aa22.04■■□□□ 1.12
SCARB2-213ENST00000638680 FILIP1LQ4L180 1135 aa22.04■■□□□ 1.12
SCARB2-213ENST00000638680 AEBP1Q8IUX7 1158 aa22.04■■□□□ 1.12
SCARB2-213ENST00000638680 CCDC112Q8NEF3 446 aa22.04■■□□□ 1.12
SCARB2-213ENST00000638680 MSH5O43196 834 aa22.03■■□□□ 1.12
SCARB2-213ENST00000638680 LEKR1Q6ZMV7 388 aa22.03■■□□□ 1.12
SCARB2-213ENST00000638680 ATF7IPQ6VMQ6 1270 aa22.03■■□□□ 1.12
SCARB2-213ENST00000638680 SLC4A2P04920 1241 aa22.03■■□□□ 1.12
SCARB2-213ENST00000638680 SCAPERQ9BY12 1400 aa22.02■■□□□ 1.12
SCARB2-213ENST00000638680 MAP4K4O95819 1239 aaPredicted RBP22.02■■□□□ 1.12
SCARB2-213ENST00000638680 WDR63Q8IWG1 891 aa22.02■■□□□ 1.12
SCARB2-213ENST00000638680 LRRCC1Q9C099 1032 aa22.02■■□□□ 1.12
SCARB2-213ENST00000638680 SKIDA1Q1XH10 827 aa22.02■■□□□ 1.12
SCARB2-213ENST00000638680 CCDC43Q96MW1 224 aaKnown RBP22.02■■□□□ 1.12
SCARB2-213ENST00000638680 ARAP1Q96P48 1450 aa22.02■■□□□ 1.12
SCARB2-213ENST00000638680 SERPINC1P01008 464 aa22.02■■□□□ 1.11
SCARB2-213ENST00000638680 MTMR7Q9Y216 660 aa22.02■■□□□ 1.11
SCARB2-213ENST00000638680 GAS2L2Q8NHY3 880 aa22.01■■□□□ 1.11
SCARB2-213ENST00000638680 ERC1Q8IUD2 1116 aa22.01■■□□□ 1.11
SCARB2-213ENST00000638680 CIZ1Q9ULV3 898 aaPredicted RBP22■■□□□ 1.11
SCARB2-213ENST00000638680 CFTRP13569 1480 aa22■■□□□ 1.11
SCARB2-213ENST00000638680 SART3Q15020 963 aaKnown RBP22■■□□□ 1.11
SCARB2-213ENST00000638680 WDR97A6NE52 1622 aa22■■□□□ 1.11
SCARB2-213ENST00000638680 DCTN1Q14203 1278 aa22■■□□□ 1.11
SCARB2-213ENST00000638680 AXDND1Q5T1B0 1012 aaPredicted RBP21.99■■□□□ 1.11
SCARB2-213ENST00000638680 FBXO3Q9UK99 471 aa21.99■■□□□ 1.11
SCARB2-213ENST00000638680 NLRP6P59044 892 aa21.99■■□□□ 1.11
SCARB2-213ENST00000638680 KRT85P78386 507 aa21.99■■□□□ 1.11
SCARB2-213ENST00000638680 CT47B1P0C2W7 299 aaPredicted RBP21.98■■□□□ 1.11
SCARB2-213ENST00000638680 HSP90AB2PQ58FF8 381 aa21.98■■□□□ 1.11
SCARB2-213ENST00000638680 RRP9O43818 475 aaKnown RBP21.98■■□□□ 1.11
SCARB2-213ENST00000638680 TBC1D2BQ9UPU7 963 aa21.98■■□□□ 1.11
SCARB2-213ENST00000638680 RDXP35241 583 aaKnown RBP21.98■■□□□ 1.11
SCARB2-213ENST00000638680 SLC12A5Q9H2X9 1139 aa21.98■■□□□ 1.11
SCARB2-213ENST00000638680 MAGEC2Q9UBF1 373 aaPredicted RBP21.98■■□□□ 1.11
SCARB2-213ENST00000638680 NLRP2Q9NX02 1062 aa21.97■■□□□ 1.11
SCARB2-213ENST00000638680 CCT4P50991 539 aaKnown RBP21.97■■□□□ 1.11
SCARB2-213ENST00000638680 ME1P48163 572 aa21.97■■□□□ 1.11
SCARB2-213ENST00000638680 LARP1BQ659C4 914 aaKnown RBP21.97■■□□□ 1.11
SCARB2-213ENST00000638680 ANKRD1Q15327 319 aa21.97■■□□□ 1.11
SCARB2-213ENST00000638680 ODF2Q5BJF6 829 aa21.97■■□□□ 1.11
SCARB2-213ENST00000638680 KIAA1107Q9UPP5 1409 aa21.96■■□□□ 1.11
SCARB2-213ENST00000638680 CALRP27797 417 aaKnown RBP21.95■■□□□ 1.11
SCARB2-213ENST00000638680 CCDC191Q8NCU4 936 aa21.95■■□□□ 1.1
SCARB2-213ENST00000638680 ERBINQ96RT1 1412 aa21.95■■□□□ 1.1
SCARB2-213ENST00000638680 SAMD1Q6SPF0 538 aaPredicted RBP21.95■■□□□ 1.1
SCARB2-213ENST00000638680 TSPYL1Q9H0U9 437 aa21.95■■□□□ 1.1
SCARB2-213ENST00000638680 FAM177A1Q8N128 213 aaPredicted RBP21.94■■□□□ 1.1
SCARB2-213ENST00000638680 JMYQ8N9B5 988 aa21.93■■□□□ 1.1
SCARB2-213ENST00000638680 RBM33Q96EV2 1170 aaKnown RBP21.93■■□□□ 1.1
SCARB2-213ENST00000638680 DHX8Q14562 1220 aaKnown RBP21.93■■□□□ 1.1
SCARB2-213ENST00000638680 SPATA32Q96LK8 384 aa21.93■■□□□ 1.1
SCARB2-213ENST00000638680 MYO6Q9UM54 1294 aa21.93■■□□□ 1.1
SCARB2-213ENST00000638680 ZFYVE27Q5T4F4 411 aa21.93■■□□□ 1.1
SCARB2-213ENST00000638680 SYCE3A1L190 88 aa21.93■■□□□ 1.1
SCARB2-213ENST00000638680 ZSCAN30Q86W11 494 aa21.93■■□□□ 1.1
SCARB2-213ENST00000638680 ARHGAP5Q13017 1502 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms