RNA–Protein interactions for RNA: ENST00000637941.1

TCF4-289, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 2,115 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-289ENST00000637941 GSE1Q14687 1217 aa16.25■□□□□ 0.19
TCF4-289ENST00000637941 SLC4A3P48751 1232 aa16.24■□□□□ 0.19
TCF4-289ENST00000637941 FBXO31Q5XUX0 539 aaPredicted RBP16.24■□□□□ 0.19
TCF4-289ENST00000637941 HDGFL2Q7Z4V5 671 aaPredicted RBP16.24■□□□□ 0.19
TCF4-289ENST00000637941 YTHDC2Q9H6S0 1430 aaKnown RBP16.24■□□□□ 0.19
TCF4-289ENST00000637941 NUTM2DQ5VT03 806 aaPredicted RBP16.24■□□□□ 0.19
TCF4-289ENST00000637941 DZIP1LQ8IYY4 767 aaKnown RBP16.24■□□□□ 0.19
TCF4-289ENST00000637941 MLECQ14165 292 aa16.23■□□□□ 0.19
TCF4-289ENST00000637941 RLBP1P12271 317 aa16.22■□□□□ 0.19
TCF4-289ENST00000637941 POGKQ9P215 609 aa16.22■□□□□ 0.19
TCF4-289ENST00000637941 U2SURPO15042 1029 aaKnown RBP16.22■□□□□ 0.19
TCF4-289ENST00000637941 TMPOP42166 694 aaKnown RBP16.22■□□□□ 0.19
TCF4-289ENST00000637941 PLEKHF1Q96S99 279 aa16.22■□□□□ 0.19
TCF4-289ENST00000637941 PCDHB15Q9Y5E8 787 aa16.22■□□□□ 0.19
TCF4-289ENST00000637941 CDC42BPGQ6DT37 1551 aa16.21■□□□□ 0.19
TCF4-289ENST00000637941 USP19O94966 1318 aa16.21■□□□□ 0.19
TCF4-289ENST00000637941 STK26Q9P289 416 aa16.21■□□□□ 0.19
TCF4-289ENST00000637941 PDZRN3Q9UPQ7 1066 aa16.21■□□□□ 0.19
TCF4-289ENST00000637941 BCL2L13Q9BXK5 485 aa16.21■□□□□ 0.18
TCF4-289ENST00000637941 SMC4Q9NTJ3 1288 aa16.21■□□□□ 0.18
TCF4-289ENST00000637941 DDX19BQ9UMR2 479 aa16.21■□□□□ 0.18
TCF4-289ENST00000637941 ALKQ9UM73 1620 aa16.2■□□□□ 0.18
TCF4-289ENST00000637941 SAFB2Q14151 953 aaKnown RBP eCLIP16.2■□□□□ 0.18
TCF4-289ENST00000637941 DLC1Q96QB1 1528 aa16.2■□□□□ 0.18
TCF4-289ENST00000637941 NLRP1Q9C000 1473 aa16.2■□□□□ 0.18
TCF4-289ENST00000637941 CD163L1Q9NR16 1453 aa16.2■□□□□ 0.18
TCF4-289ENST00000637941 GGNBP2Q9H3C7 697 aa16.19■□□□□ 0.18
TCF4-289ENST00000637941 ESF1Q9H501 851 aaKnown RBP16.19■□□□□ 0.18
TCF4-289ENST00000637941 STAG3Q9UJ98 1225 aa16.19■□□□□ 0.18
TCF4-289ENST00000637941 KIF16BQ96L93 1317 aa16.19■□□□□ 0.18
TCF4-289ENST00000637941 DIAPH1O60610 1272 aaKnown RBP16.19■□□□□ 0.18
TCF4-289ENST00000637941 PRAM1Q96QH2 718 aa16.19■□□□□ 0.18
TCF4-289ENST00000637941 PNPLA6Q8IY17 1366 aa16.18■□□□□ 0.18
TCF4-289ENST00000637941 SPATA31D1Q6ZQQ2 1576 aa16.18■□□□□ 0.18
TCF4-289ENST00000637941 FYB1O15117 783 aa16.18■□□□□ 0.18
TCF4-289ENST00000637941 IPO8O15397 1037 aaKnown RBP16.18■□□□□ 0.18
TCF4-289ENST00000637941 MINK1Q8N4C8 1332 aaPredicted RBP16.18■□□□□ 0.18
TCF4-289ENST00000637941 EXOSC9Q06265 439 aaKnown RBP16.18■□□□□ 0.18
TCF4-289ENST00000637941 ATP7BP35670 1465 aa16.17■□□□□ 0.18
TCF4-289ENST00000637941 HDAC1Q13547 482 aaPredicted RBP16.17■□□□□ 0.18
TCF4-289ENST00000637941 ZNF428Q96B54 188 aa16.17■□□□□ 0.18
TCF4-289ENST00000637941 ATF7IPQ6VMQ6 1270 aa16.16■□□□□ 0.18
TCF4-289ENST00000637941 TBC1D32Q96NH3 1257 aa16.16■□□□□ 0.18
TCF4-289ENST00000637941 TRIM35Q9UPQ4 493 aa16.16■□□□□ 0.18
TCF4-289ENST00000637941 TNNQ9UQP3 1299 aa16.16■□□□□ 0.18
TCF4-289ENST00000637941 FCHSD2O94868 740 aa16.15■□□□□ 0.18
TCF4-289ENST00000637941 RIPK4P57078 832 aa16.15■□□□□ 0.18
TCF4-289ENST00000637941 ALDH1L2Q3SY69 923 aa16.15■□□□□ 0.18
TCF4-289ENST00000637941 TSR2Q969E8 191 aaKnown RBP16.15■□□□□ 0.18
TCF4-289ENST00000637941 CHMP4BQ9H444 224 aaKnown RBP16.15■□□□□ 0.18
TCF4-289ENST00000637941 SEC24BO95487 1268 aa16.14■□□□□ 0.17
TCF4-289ENST00000637941 CALD1Q05682 793 aaKnown RBP16.14■□□□□ 0.17
TCF4-289ENST00000637941 CDK19Q9BWU1 502 aa16.14■□□□□ 0.17
TCF4-289ENST00000637941 TRIM27P14373 513 aa16.13■□□□□ 0.17
TCF4-289ENST00000637941 ITPRIPQ8IWB1 547 aa16.13■□□□□ 0.17
TCF4-289ENST00000637941 SSH1Q8WYL5 1049 aa16.13■□□□□ 0.17
TCF4-289ENST00000637941 LRRC7Q96NW7 1537 aa16.12■□□□□ 0.17
TCF4-289ENST00000637941 FRAT2O75474 233 aaPredicted RBP16.12■□□□□ 0.17
TCF4-289ENST00000637941 PPIP5K1Q6PFW1 1433 aa16.12■□□□□ 0.17
TCF4-289ENST00000637941 A2ML1A8K2U0 1454 aa16.11■□□□□ 0.17
TCF4-289ENST00000637941 FAM135BQ49AJ0 1406 aa16.11■□□□□ 0.17
TCF4-289ENST00000637941 BRPF1P55201 1214 aaPredicted RBP16.1■□□□□ 0.17
TCF4-289ENST00000637941 SETD1AO15047 1707 aaKnown RBP16.1■□□□□ 0.17
TCF4-289ENST00000637941 NOB1Q9ULX3 412 aaKnown RBP16.1■□□□□ 0.17
TCF4-289ENST00000637941 SMC5Q8IY18 1101 aa16.09■□□□□ 0.17
TCF4-289ENST00000637941 CABP1Q9NZU7 370 aa16.09■□□□□ 0.17
TCF4-289ENST00000637941 MAP2P11137 1827 aaKnown RBP16.09■□□□□ 0.17
TCF4-289ENST00000637941 SENP3Q9H4L4 574 aaPredicted RBP16.09■□□□□ 0.17
TCF4-289ENST00000637941 RIMS2Q9UQ26 1411 aa16.08■□□□□ 0.16
TCF4-289ENST00000637941 ZBTB40Q9NUA8 1239 aa16.07■□□□□ 0.16
TCF4-289ENST00000637941 EDC4Q6P2E9 1401 aaKnown RBP16.07■□□□□ 0.16
TCF4-289ENST00000637941 RSPH6AQ9H0K4 717 aa16.07■□□□□ 0.16
TCF4-289ENST00000637941 CDK12Q9NYV4 1490 aaPredicted RBP16.06■□□□□ 0.16
TCF4-289ENST00000637941 TMEM57Q8N5G2 664 aa16.06■□□□□ 0.16
TCF4-289ENST00000637941 LMOD3Q0VAK6 560 aa16.06■□□□□ 0.16
TCF4-289ENST00000637941 NFE2L2Q16236 605 aa16.06■□□□□ 0.16
TCF4-289ENST00000637941 ARHGAP45Q92619 1136 aa16.06■□□□□ 0.16
TCF4-289ENST00000637941 C22orf23Q9BZE7 217 aa16.06■□□□□ 0.16
TCF4-289ENST00000637941 KNDC1Q76NI1 1749 aa16.05■□□□□ 0.16
TCF4-289ENST00000637941 TNRQ92752 1358 aa16.05■□□□□ 0.16
TCF4-289ENST00000637941 PRKAR2BP31323 418 aa16.05■□□□□ 0.16
TCF4-289ENST00000637941 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.05■□□□□ 0.16
TCF4-289ENST00000637941 TBC1D2Q9BYX2 928 aa16.05■□□□□ 0.16
TCF4-289ENST00000637941 ANTXR1Q9H6X2 564 aa16.05■□□□□ 0.16
TCF4-289ENST00000637941 TRHP20396 242 aaPredicted RBP16.04■□□□□ 0.16
TCF4-289ENST00000637941 GNAI1P63096 354 aa16.04■□□□□ 0.16
TCF4-289ENST00000637941 SLKQ9H2G2 1235 aaPredicted RBP16.04■□□□□ 0.16
TCF4-289ENST00000637941 POLKQ9UBT6 870 aa16.04■□□□□ 0.16
TCF4-289ENST00000637941 AATKQ6ZMQ8 1374 aa16.04■□□□□ 0.16
TCF4-289ENST00000637941 IL27Q8NEV9 243 aa16.03■□□□□ 0.16
TCF4-289ENST00000637941 IFT57Q9NWB7 429 aa16.03■□□□□ 0.16
TCF4-289ENST00000637941 CPSF1Q10570 1443 aaKnown RBP16.03■□□□□ 0.16
TCF4-289ENST00000637941 MON2Q7Z3U7 1717 aa16.03■□□□□ 0.16
TCF4-289ENST00000637941 HDGFP51858 240 aaKnown RBP16.03■□□□□ 0.16
TCF4-289ENST00000637941 NUCB1Q02818 461 aa16.03■□□□□ 0.16
TCF4-289ENST00000637941 PTCH1Q13635 1447 aa16.02■□□□□ 0.16
TCF4-289ENST00000637941 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.02■□□□□ 0.16
TCF4-289ENST00000637941 GCC1Q96CN9 775 aa16.02■□□□□ 0.16
TCF4-289ENST00000637941 ITSN1Q15811 1721 aa16.02■□□□□ 0.15
TCF4-289ENST00000637941 PIK3R4Q99570 1358 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms