RNA–Protein interactions for RNA: ENST00000637915.1

CTSD-213, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,982 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-213ENST00000637915 PNPLA6Q8IY17 1366 aa21.65■■□□□ 1.06
CTSD-213ENST00000637915 CCDC27Q2M243 656 aa21.65■■□□□ 1.06
CTSD-213ENST00000637915 NCBP3Q53F19 620 aaKnown RBP21.64■■□□□ 1.05
CTSD-213ENST00000637915 AKAP12Q02952 1782 aa21.64■■□□□ 1.05
CTSD-213ENST00000637915 EID1Q9Y6B2 187 aa21.63■■□□□ 1.05
CTSD-213ENST00000637915 CCDC61Q9Y6R9 512 aa21.63■■□□□ 1.05
CTSD-213ENST00000637915 ITSN1Q15811 1721 aa21.63■■□□□ 1.05
CTSD-213ENST00000637915 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.63■■□□□ 1.05
CTSD-213ENST00000637915 PLPPR3Q6T4P5 718 aa21.62■■□□□ 1.05
CTSD-213ENST00000637915 WDR63Q8IWG1 891 aa21.62■■□□□ 1.05
CTSD-213ENST00000637915 NCKAP5LQ9HCH0 1330 aa21.62■■□□□ 1.05
CTSD-213ENST00000637915 PTPRUQ92729 1446 aa21.61■■□□□ 1.05
CTSD-213ENST00000637915 U2SURPO15042 1029 aaKnown RBP21.61■■□□□ 1.05
CTSD-213ENST00000637915 PRR36Q9H6K5 1346 aa21.61■■□□□ 1.05
CTSD-213ENST00000637915 SLC26A8Q96RN1 970 aa21.6■■□□□ 1.05
CTSD-213ENST00000637915 PLEKHF1Q96S99 279 aa21.6■■□□□ 1.05
CTSD-213ENST00000637915 TOPAZ1Q8N9V7 1692 aa21.59■■□□□ 1.05
CTSD-213ENST00000637915 DIAPH1O60610 1272 aaKnown RBP21.59■■□□□ 1.05
CTSD-213ENST00000637915 MAP2P11137 1827 aaKnown RBP21.58■■□□□ 1.05
CTSD-213ENST00000637915 BCAR3O75815 825 aa21.57■■□□□ 1.04
CTSD-213ENST00000637915 NME9Q86XW9 330 aa21.57■■□□□ 1.04
CTSD-213ENST00000637915 POLKQ9UBT6 870 aa21.57■■□□□ 1.04
CTSD-213ENST00000637915 THEMISQ8N1K5 641 aaPredicted RBP21.57■■□□□ 1.04
CTSD-213ENST00000637915 DIP2AQ14689 1571 aa21.56■■□□□ 1.04
CTSD-213ENST00000637915 FBLN1P23142 703 aa21.56■■□□□ 1.04
CTSD-213ENST00000637915 TBX22Q9Y458 520 aa21.56■■□□□ 1.04
CTSD-213ENST00000637915 NRKQ7Z2Y5 1582 aa21.55■■□□□ 1.04
CTSD-213ENST00000637915 ZNF692Q9BU19 519 aaPredicted RBP21.54■■□□□ 1.04
CTSD-213ENST00000637915 PTCH1Q13635 1447 aa21.53■■□□□ 1.04
CTSD-213ENST00000637915 MAPK8IP3Q9UPT6 1336 aa21.53■■□□□ 1.04
CTSD-213ENST00000637915 LRRC7Q96NW7 1537 aa21.53■■□□□ 1.04
CTSD-213ENST00000637915 ZRANB1Q9UGI0 708 aa21.53■■□□□ 1.04
CTSD-213ENST00000637915 AATKQ6ZMQ8 1374 aa21.53■■□□□ 1.04
CTSD-213ENST00000637915 CEP170BQ9Y4F5 1589 aaPredicted RBP21.53■■□□□ 1.04
CTSD-213ENST00000637915 TMPOP42166 694 aaKnown RBP21.52■■□□□ 1.04
CTSD-213ENST00000637915 AMOTL2Q9Y2J4 779 aa21.52■■□□□ 1.04
CTSD-213ENST00000637915 CDK12Q9NYV4 1490 aaPredicted RBP21.52■■□□□ 1.04
CTSD-213ENST00000637915 PPM1GO15355 546 aaPredicted RBP21.52■■□□□ 1.04
CTSD-213ENST00000637915 RIMS1Q86UR5 1692 aaKnown RBP21.51■■□□□ 1.03
CTSD-213ENST00000637915 FANCIQ9NVI1 1328 aa21.51■■□□□ 1.03
CTSD-213ENST00000637915 COG3Q96JB2 828 aa21.5■■□□□ 1.03
CTSD-213ENST00000637915 MYH16Q9H6N6 1097 aa21.5■■□□□ 1.03
CTSD-213ENST00000637915 EMILIN1Q9Y6C2 1016 aa21.5■■□□□ 1.03
CTSD-213ENST00000637915 XRN1Q8IZH2 1706 aaKnown RBP21.5■■□□□ 1.03
CTSD-213ENST00000637915 PNNQ9H307 717 aaKnown RBP21.5■■□□□ 1.03
CTSD-213ENST00000637915 TRIM35Q9UPQ4 493 aa21.5■■□□□ 1.03
CTSD-213ENST00000637915 PLEKHG3A1L390 1219 aa21.48■■□□□ 1.03
CTSD-213ENST00000637915 FCHSD2O94868 740 aa21.48■■□□□ 1.03
CTSD-213ENST00000637915 RARSP54136 660 aaKnown RBP21.48■■□□□ 1.03
CTSD-213ENST00000637915 ACEP12821 1306 aa21.48■■□□□ 1.03
CTSD-213ENST00000637915 RSPH6AQ9H0K4 717 aa21.47■■□□□ 1.03
CTSD-213ENST00000637915 KDM2BQ8NHM5 1336 aa21.47■■□□□ 1.03
CTSD-213ENST00000637915 NUTM2FA1L443 756 aa21.47■■□□□ 1.03
CTSD-213ENST00000637915 PDE3AQ14432 1141 aa21.46■■□□□ 1.03
CTSD-213ENST00000637915 USP6P35125 1406 aa21.46■■□□□ 1.03
CTSD-213ENST00000637915 TTC21BQ7Z4L5 1316 aa21.46■■□□□ 1.03
CTSD-213ENST00000637915 TCERG1O14776 1098 aaKnown RBP21.45■■□□□ 1.02
CTSD-213ENST00000637915 RIPK4P57078 832 aa21.45■■□□□ 1.02
CTSD-213ENST00000637915 PRKAR2BP31323 418 aa21.44■■□□□ 1.02
CTSD-213ENST00000637915 IL13P35225 146 aa21.44■■□□□ 1.02
CTSD-213ENST00000637915 OVOS2A0A0J9YW53 1432 aa21.44■■□□□ 1.02
CTSD-213ENST00000637915 OVOS2Q6IE36 1432 aa21.44■■□□□ 1.02
CTSD-213ENST00000637915 RRS1Q15050 365 aaKnown RBP21.43■■□□□ 1.02
CTSD-213ENST00000637915 IL16Q14005 1332 aa21.43■■□□□ 1.02
CTSD-213ENST00000637915 NALCNQ8IZF0 1738 aa21.43■■□□□ 1.02
CTSD-213ENST00000637915 CANXP27824 592 aaKnown RBP21.43■■□□□ 1.02
CTSD-213ENST00000637915 ZNF142P52746 1687 aaPredicted RBP21.43■■□□□ 1.02
CTSD-213ENST00000637915 TSR2Q969E8 191 aaKnown RBP21.42■■□□□ 1.02
CTSD-213ENST00000637915 CENPQQ7L2Z9 268 aaPredicted RBP21.41■■□□□ 1.02
CTSD-213ENST00000637915 SSH2Q76I76 1423 aa21.41■■□□□ 1.02
CTSD-213ENST00000637915 ADAMTSL3P82987 1691 aa21.41■■□□□ 1.02
CTSD-213ENST00000637915 RGPD8O14715 1765 aaPredicted RBP21.41■■□□□ 1.02
CTSD-213ENST00000637915 PIK3R4Q99570 1358 aa21.41■■□□□ 1.02
CTSD-213ENST00000637915 HMOX1P09601 288 aa21.4■■□□□ 1.02
CTSD-213ENST00000637915 CT47B1P0C2W7 299 aaPredicted RBP21.4■■□□□ 1.02
CTSD-213ENST00000637915 FRAT1Q92837 279 aaPredicted RBP21.4■■□□□ 1.02
CTSD-213ENST00000637915 PANK1Q8TE04 598 aa21.39■■□□□ 1.02
CTSD-213ENST00000637915 NEFMP07197 916 aa21.38■■□□□ 1.01
CTSD-213ENST00000637915 PHACTR3Q96KR7 559 aa21.38■■□□□ 1.01
CTSD-213ENST00000637915 BCL2L13Q9BXK5 485 aa21.38■■□□□ 1.01
CTSD-213ENST00000637915 MS4A1P11836 297 aa21.37■■□□□ 1.01
CTSD-213ENST00000637915 KCNA6P17658 529 aa21.37■■□□□ 1.01
CTSD-213ENST00000637915 EXOSC9Q06265 439 aaKnown RBP21.37■■□□□ 1.01
CTSD-213ENST00000637915 MSH5O43196 834 aa21.36■■□□□ 1.01
CTSD-213ENST00000637915 NFE2L2Q16236 605 aa21.36■■□□□ 1.01
CTSD-213ENST00000637915 COG6Q9Y2V7 657 aa21.36■■□□□ 1.01
CTSD-213ENST00000637915 SKAP1Q86WV1 359 aa21.36■■□□□ 1.01
CTSD-213ENST00000637915 PMFBP1Q8TBY8 1022 aa21.36■■□□□ 1.01
CTSD-213ENST00000637915 USP31Q70CQ4 1352 aa21.35■■□□□ 1.01
CTSD-213ENST00000637915 PEAK1Q9H792 1746 aa21.35■■□□□ 1.01
CTSD-213ENST00000637915 FMN2Q9NZ56 1722 aa21.35■■□□□ 1.01
CTSD-213ENST00000637915 ANKARQ7Z5J8 1434 aa21.34■■□□□ 1.01
CTSD-213ENST00000637915 TTC21AQ8NDW8 1320 aa21.34■■□□□ 1.01
CTSD-213ENST00000637915 CHD2O14647 1828 aaKnown RBP21.34■■□□□ 1.01
CTSD-213ENST00000637915 RLBP1P12271 317 aa21.33■■□□□ 1.01
CTSD-213ENST00000637915 CLUAP1Q96AJ1 413 aa21.33■■□□□ 1.01
CTSD-213ENST00000637915 TNNQ9UQP3 1299 aa21.33■■□□□ 1.01
CTSD-213ENST00000637915 ANKLE2Q86XL3 938 aa21.32■■□□□ 1
CTSD-213ENST00000637915 DLG5Q8TDM6 1919 aa21.32■■□□□ 1
CTSD-213ENST00000637915 NGDNQ8NEJ9 315 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms