RNA–Protein interactions for RNA: ENST00000637874.1

EFHC1-236, Transcript of EF-hand domain containing 1, humanhuman

TSL 3

Gene EFHC1, Length 490 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-236ENST00000637874 USP46P62068 366 aa6.97□□□□□ -1.29
EFHC1-236ENST00000637874 MTMR2Q13614 643 aa6.97□□□□□ -1.29
EFHC1-236ENST00000637874 TBC1D9Q6ZT07 1266 aa6.97□□□□□ -1.29
EFHC1-236ENST00000637874 TATDN2Q93075 761 aa6.97□□□□□ -1.29
EFHC1-236ENST00000637874 SMAPO00193 183 aa6.96□□□□□ -1.3
EFHC1-236ENST00000637874 SOX11P35716 441 aa6.96□□□□□ -1.3
EFHC1-236ENST00000637874 GCGRP47871 477 aa6.96□□□□□ -1.3
EFHC1-236ENST00000637874 B4GALNT3Q6L9W6 998 aa6.96□□□□□ -1.3
EFHC1-236ENST00000637874 UNCXA6NJT0 531 aa6.95□□□□□ -1.3
EFHC1-236ENST00000637874 CFAP99D6REC4 459 aa6.95□□□□□ -1.3
EFHC1-236ENST00000637874 NYAP1Q6ZVC0 841 aa6.95□□□□□ -1.3
EFHC1-236ENST00000637874 PACS2Q86VP3 889 aa6.95□□□□□ -1.3
EFHC1-236ENST00000637874 C6orf229H3BNL8 230 aa6.94□□□□□ -1.3
EFHC1-236ENST00000637874 RSPH4AQ5TD94 716 aa6.94□□□□□ -1.3
EFHC1-236ENST00000637874 GNEQ9Y223 722 aaKnown RBP6.94□□□□□ -1.3
EFHC1-236ENST00000637874 FAM181BA6NEQ2 426 aa6.93□□□□□ -1.3
EFHC1-236ENST00000637874 TRIM6-TRIM34B2RNG4 842 aa6.93□□□□□ -1.3
EFHC1-236ENST00000637874 ATP9BO43861 1147 aa6.93□□□□□ -1.3
EFHC1-236ENST00000637874 NR6A1Q15406 480 aa6.93□□□□□ -1.3
EFHC1-236ENST00000637874 PNMA1Q8ND90 353 aa6.93□□□□□ -1.3
EFHC1-236ENST00000637874 CCER1Q8TC90 406 aaPredicted RBP6.93□□□□□ -1.3
EFHC1-236ENST00000637874 PPP1R3GB7ZBB8 358 aa6.92□□□□□ -1.3
EFHC1-236ENST00000637874 EIF4G2P78344 907 aaKnown RBP eCLIP6.92□□□□□ -1.3
EFHC1-236ENST00000637874 SLF2Q8IX21 1173 aa6.92□□□□□ -1.3
EFHC1-236ENST00000637874 STK32AQ8WU08 396 aa6.92□□□□□ -1.3
EFHC1-236ENST00000637874 PTPREP23469 700 aa6.91□□□□□ -1.3
EFHC1-236ENST00000637874 MYT1Q01538 1121 aa6.91□□□□□ -1.3
EFHC1-236ENST00000637874 TMEM164Q5U3C3 297 aa6.91□□□□□ -1.3
EFHC1-236ENST00000637874 KRTAP4-8Q9BYQ9 185 aa6.91□□□□□ -1.3
EFHC1-236ENST00000637874 NBPF3Q9H094 633 aa6.91□□□□□ -1.3
EFHC1-236ENST00000637874 ANKK1Q8NFD2 765 aa6.9□□□□□ -1.3
EFHC1-236ENST00000637874 BCL2L12Q9HB09 334 aa6.9□□□□□ -1.3
EFHC1-236ENST00000637874 ZMIZ1Q9ULJ6 1067 aa6.9□□□□□ -1.3
EFHC1-236ENST00000637874 NOVA2Q9UNW9 492 aaKnown RBP6.9□□□□□ -1.3
EFHC1-236ENST00000637874 RBM47A0AV96 593 aaKnown RBP6.89□□□□□ -1.31
EFHC1-236ENST00000637874 PIK3CDO00329 1044 aa6.89□□□□□ -1.31
EFHC1-236ENST00000637874 SLC10A3P09131 477 aa6.89□□□□□ -1.31
EFHC1-236ENST00000637874 PKDCCQ504Y2 493 aa6.89□□□□□ -1.31
EFHC1-236ENST00000637874 KANK4Q5T7N3 995 aaPredicted RBP6.89□□□□□ -1.31
EFHC1-236ENST00000637874 SYMPKQ92797 1274 aaKnown RBP6.89□□□□□ -1.31
EFHC1-236ENST00000637874 ELOAQ14241 798 aaKnown RBP6.88□□□□□ -1.31
EFHC1-236ENST00000637874 PROX2Q3B8N5 592 aa6.88□□□□□ -1.31
EFHC1-236ENST00000637874 SWT1Q5T5J6 900 aaKnown RBP6.88□□□□□ -1.31
EFHC1-236ENST00000637874 TXNDC2Q86VQ3 553 aa6.88□□□□□ -1.31
EFHC1-236ENST00000637874 PER1O15534 1290 aaPredicted RBP6.87□□□□□ -1.31
EFHC1-236ENST00000637874 FUT2Q10981 343 aa6.87□□□□□ -1.31
EFHC1-236ENST00000637874 GRIPAP1Q4V328 841 aa6.87□□□□□ -1.31
EFHC1-236ENST00000637874 MRRFQ96E11 262 aaKnown RBP6.87□□□□□ -1.31
EFHC1-236ENST00000637874 USP17L3A6NCW0 530 aa6.86□□□□□ -1.31
EFHC1-236ENST00000637874 USP17L4A6NCW7 530 aa6.86□□□□□ -1.31
EFHC1-236ENST00000637874 SKIP12755 728 aa6.86□□□□□ -1.31
EFHC1-236ENST00000637874 NR1H3Q13133 447 aa6.86□□□□□ -1.31
EFHC1-236ENST00000637874 PHLDB3Q6NSJ2 640 aa6.86□□□□□ -1.31
EFHC1-236ENST00000637874 USP17L2Q6R6M4 530 aa6.86□□□□□ -1.31
EFHC1-236ENST00000637874 USP17L1Q7RTZ2 530 aa6.86□□□□□ -1.31
EFHC1-236ENST00000637874 DEPDC4Q8N2C3 294 aa6.86□□□□□ -1.31
EFHC1-236ENST00000637874 ARID4AP29374 1257 aaPredicted RBP6.85□□□□□ -1.31
EFHC1-236ENST00000637874 USP17L5A8MUK1 530 aa6.84□□□□□ -1.31
EFHC1-236ENST00000637874 DGAT1O75907 488 aa6.84□□□□□ -1.31
EFHC1-236ENST00000637874 FBXO45P0C2W1 286 aa6.84□□□□□ -1.31
EFHC1-236ENST00000637874 NFX1Q12986 1120 aaKnown RBP6.84□□□□□ -1.31
EFHC1-236ENST00000637874 DNAJC14Q6Y2X3 702 aaPredicted RBP6.84□□□□□ -1.31
EFHC1-236ENST00000637874 KIAA1522Q9P206 1035 aaPredicted RBP6.84□□□□□ -1.31
EFHC1-236ENST00000637874 KIAA1468Q9P260 1216 aa6.84□□□□□ -1.31
EFHC1-236ENST00000637874 USP17L15C9J2P7 530 aa6.83□□□□□ -1.32
EFHC1-236ENST00000637874 USP17L10C9JJH3 530 aa6.83□□□□□ -1.32
EFHC1-236ENST00000637874 USP17L13C9JLJ4 530 aa6.83□□□□□ -1.32
EFHC1-236ENST00000637874 USP17L12C9JPN9 530 aa6.83□□□□□ -1.32
EFHC1-236ENST00000637874 USP17L11C9JVI0 530 aa6.83□□□□□ -1.32
EFHC1-236ENST00000637874 USP17L21D6R901 530 aa6.83□□□□□ -1.32
EFHC1-236ENST00000637874 USP17L18D6R9N7 530 aa6.83□□□□□ -1.32
EFHC1-236ENST00000637874 USP17L22D6RA61 530 aa6.83□□□□□ -1.32
EFHC1-236ENST00000637874 USP17L17D6RBQ6 530 aa6.83□□□□□ -1.32
EFHC1-236ENST00000637874 USP17L19D6RCP7 530 aa6.83□□□□□ -1.32
EFHC1-236ENST00000637874 USP17L20D6RJB6 530 aa6.83□□□□□ -1.32
EFHC1-236ENST00000637874 ERCC3P19447 782 aa6.83□□□□□ -1.32
EFHC1-236ENST00000637874 SSFA2P28290 1259 aa6.83□□□□□ -1.32
EFHC1-236ENST00000637874 SERPINB4P48594 390 aa6.83□□□□□ -1.32
EFHC1-236ENST00000637874 SLC4A3P48751 1232 aa6.83□□□□□ -1.32
EFHC1-236ENST00000637874 BCAMP50895 628 aa6.83□□□□□ -1.32
EFHC1-236ENST00000637874 USP17L24Q0WX57 530 aa6.83□□□□□ -1.32
EFHC1-236ENST00000637874 ZBED2Q9BTP6 218 aa6.83□□□□□ -1.32
EFHC1-236ENST00000637874 BCL2L13Q9BXK5 485 aa6.83□□□□□ -1.32
EFHC1-236ENST00000637874 IGSF5Q9NSI5 407 aa6.83□□□□□ -1.32
EFHC1-236ENST00000637874 BIN2Q9UBW5 565 aaPredicted RBP6.83□□□□□ -1.32
EFHC1-236ENST00000637874 SOWAHDA6NJG2 315 aa6.82□□□□□ -1.32
EFHC1-236ENST00000637874 ZBBXA8MT70 800 aa6.82□□□□□ -1.32
EFHC1-236ENST00000637874 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.82□□□□□ -1.32
EFHC1-236ENST00000637874 CFHP08603 1231 aa6.82□□□□□ -1.32
EFHC1-236ENST00000637874 HDGFP51858 240 aaKnown RBP6.82□□□□□ -1.32
EFHC1-236ENST00000637874 CRTC2Q53ET0 693 aaPredicted RBP6.82□□□□□ -1.32
EFHC1-236ENST00000637874 XP32Q5T750 250 aa6.82□□□□□ -1.32
EFHC1-236ENST00000637874 LARP1Q6PKG0 1096 aaKnown RBP6.82□□□□□ -1.32
EFHC1-236ENST00000637874 NFATC2IPQ8NCF5 419 aa6.82□□□□□ -1.32
EFHC1-236ENST00000637874 MKRN1Q9UHC7 482 aaKnown RBP6.82□□□□□ -1.32
EFHC1-236ENST00000637874 FAM196BA6NMK8 535 aa6.81□□□□□ -1.32
EFHC1-236ENST00000637874 HMGB1P09429 215 aaKnown RBP6.81□□□□□ -1.32
EFHC1-236ENST00000637874 ZNF16P17020 682 aaPredicted RBP6.81□□□□□ -1.32
EFHC1-236ENST00000637874 RASA1P20936 1047 aa6.81□□□□□ -1.32
EFHC1-236ENST00000637874 ATP6V1AP38606 617 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms