RNA–Protein interactions for RNA: ENST00000637555.1

CNTNAP2-220, Transcript of contactin associated protein like 2, humanhuman

TSL 5

Gene CNTNAP2, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-220ENST00000637555 KNSTRNQ9Y448 316 aa17.25■□□□□ 0.35
CNTNAP2-220ENST00000637555 PIK3C2AO00443 1686 aa17.24■□□□□ 0.35
CNTNAP2-220ENST00000637555 PMFBP1Q8TBY8 1022 aa17.24■□□□□ 0.35
CNTNAP2-220ENST00000637555 MRS2Q9HD23 443 aa17.24■□□□□ 0.35
CNTNAP2-220ENST00000637555 PHF8Q9UPP1 1060 aa17.24■□□□□ 0.35
CNTNAP2-220ENST00000637555 PARD3Q8TEW0 1356 aa17.23■□□□□ 0.35
CNTNAP2-220ENST00000637555 CNGB1Q14028 1251 aaPredicted RBP17.23■□□□□ 0.35
CNTNAP2-220ENST00000637555 NHSL1Q5SYE7 1610 aa17.23■□□□□ 0.35
CNTNAP2-220ENST00000637555 ORAI2Q96SN7 254 aa17.22■□□□□ 0.35
CNTNAP2-220ENST00000637555 ZNF692Q9BU19 519 aaPredicted RBP17.22■□□□□ 0.35
CNTNAP2-220ENST00000637555 ESCO1Q5FWF5 840 aa17.21■□□□□ 0.35
CNTNAP2-220ENST00000637555 NSD2O96028 1365 aa17.21■□□□□ 0.35
CNTNAP2-220ENST00000637555 IQSEC2Q5JU85 1478 aa17.21■□□□□ 0.35
CNTNAP2-220ENST00000637555 ALS2Q96Q42 1657 aa17.21■□□□□ 0.35
CNTNAP2-220ENST00000637555 CGNL1Q0VF96 1302 aa17.2■□□□□ 0.34
CNTNAP2-220ENST00000637555 ROBO1Q9Y6N7 1651 aa17.19■□□□□ 0.34
CNTNAP2-220ENST00000637555 CC2D1BQ5T0F9 858 aaKnown RBP17.19■□□□□ 0.34
CNTNAP2-220ENST00000637555 NGDNQ8NEJ9 315 aaKnown RBP17.19■□□□□ 0.34
CNTNAP2-220ENST00000637555 BRD4O60885 1362 aaPredicted RBP17.18■□□□□ 0.34
CNTNAP2-220ENST00000637555 TTC21BQ7Z4L5 1316 aa17.18■□□□□ 0.34
CNTNAP2-220ENST00000637555 FYB1O15117 783 aa17.17■□□□□ 0.34
CNTNAP2-220ENST00000637555 SLAIN2Q9P270 581 aa17.17■□□□□ 0.34
CNTNAP2-220ENST00000637555 PXDNQ92626 1479 aa17.17■□□□□ 0.34
CNTNAP2-220ENST00000637555 RALBP1Q15311 655 aa17.16■□□□□ 0.34
CNTNAP2-220ENST00000637555 BRINP3Q76B58 766 aa17.15■□□□□ 0.34
CNTNAP2-220ENST00000637555 MAP2P11137 1827 aaKnown RBP17.15■□□□□ 0.34
CNTNAP2-220ENST00000637555 TTC21AQ8NDW8 1320 aa17.15■□□□□ 0.34
CNTNAP2-220ENST00000637555 OVOS2A0A0J9YW53 1432 aa17.15■□□□□ 0.34
CNTNAP2-220ENST00000637555 OVOS2Q6IE36 1432 aa17.15■□□□□ 0.34
CNTNAP2-220ENST00000637555 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.15■□□□□ 0.34
CNTNAP2-220ENST00000637555 CRYBG1Q9Y4K1 1723 aa17.15■□□□□ 0.34
CNTNAP2-220ENST00000637555 NME9Q86XW9 330 aa17.14■□□□□ 0.33
CNTNAP2-220ENST00000637555 FOXO3O43524 673 aa17.13■□□□□ 0.33
CNTNAP2-220ENST00000637555 GGNBP2Q9H3C7 697 aa17.13■□□□□ 0.33
CNTNAP2-220ENST00000637555 AHDC1Q5TGY3 1603 aaPredicted RBP17.13■□□□□ 0.33
CNTNAP2-220ENST00000637555 MYBBP1AQ9BQG0 1328 aaKnown RBP17.12■□□□□ 0.33
CNTNAP2-220ENST00000637555 USP31Q70CQ4 1352 aa17.12■□□□□ 0.33
CNTNAP2-220ENST00000637555 ZRANB1Q9UGI0 708 aa17.12■□□□□ 0.33
CNTNAP2-220ENST00000637555 SENP3-EIF4A1A0A087X0R7 540 aa17.11■□□□□ 0.33
CNTNAP2-220ENST00000637555 RBM19Q9Y4C8 960 aaKnown RBP17.11■□□□□ 0.33
CNTNAP2-220ENST00000637555 ZBED9Q6R2W3 1325 aa17.11■□□□□ 0.33
CNTNAP2-220ENST00000637555 PSME1Q06323 249 aa17.1■□□□□ 0.33
CNTNAP2-220ENST00000637555 KRT28Q7Z3Y7 464 aa17.1■□□□□ 0.33
CNTNAP2-220ENST00000637555 DDX17Q92841 729 aaKnown RBP17.1■□□□□ 0.33
CNTNAP2-220ENST00000637555 NPHP3Q7Z494 1330 aa17.1■□□□□ 0.33
CNTNAP2-220ENST00000637555 PHRF1Q9P1Y6 1649 aaKnown RBP17.09■□□□□ 0.33
CNTNAP2-220ENST00000637555 MORC1Q86VD1 984 aa17.09■□□□□ 0.33
CNTNAP2-220ENST00000637555 SBNO1A3KN83 1393 aa17.09■□□□□ 0.33
CNTNAP2-220ENST00000637555 ABCA3Q99758 1704 aa17.09■□□□□ 0.33
CNTNAP2-220ENST00000637555 PPP2R1AP30153 589 aa17.09■□□□□ 0.33
CNTNAP2-220ENST00000637555 XPCQ01831 940 aaPredicted RBP17.09■□□□□ 0.33
CNTNAP2-220ENST00000637555 CERKQ8TCT0 537 aa17.08■□□□□ 0.33
CNTNAP2-220ENST00000637555 PHLPP1O60346 1717 aa17.08■□□□□ 0.32
CNTNAP2-220ENST00000637555 LTN1O94822 1766 aa17.08■□□□□ 0.32
CNTNAP2-220ENST00000637555 SLIT3O75094 1523 aa17.08■□□□□ 0.32
CNTNAP2-220ENST00000637555 MED1Q15648 1581 aaPredicted RBP17.07■□□□□ 0.32
CNTNAP2-220ENST00000637555 TNS3Q68CZ2 1445 aa17.07■□□□□ 0.32
CNTNAP2-220ENST00000637555 SHPRHQ149N8 1683 aa17.07■□□□□ 0.32
CNTNAP2-220ENST00000637555 SOS2Q07890 1332 aaPredicted RBP17.07■□□□□ 0.32
CNTNAP2-220ENST00000637555 PEAK1Q9H792 1746 aa17.06■□□□□ 0.32
CNTNAP2-220ENST00000637555 COL16A1Q07092 1604 aaPredicted RBP17.06■□□□□ 0.32
CNTNAP2-220ENST00000637555 NFAT5O94916 1531 aa17.06■□□□□ 0.32
CNTNAP2-220ENST00000637555 COG3Q96JB2 828 aa17.05■□□□□ 0.32
CNTNAP2-220ENST00000637555 SMG6Q86US8 1419 aaKnown RBP17.05■□□□□ 0.32
CNTNAP2-220ENST00000637555 PAK3O75914 559 aaPredicted RBP17.05■□□□□ 0.32
CNTNAP2-220ENST00000637555 NLRP13Q86W25 1043 aa17.05■□□□□ 0.32
CNTNAP2-220ENST00000637555 AATKQ6ZMQ8 1374 aa17.05■□□□□ 0.32
CNTNAP2-220ENST00000637555 ABTB2Q8N961 1025 aa17.04■□□□□ 0.32
CNTNAP2-220ENST00000637555 TOM1O60784 492 aa17.03■□□□□ 0.32
CNTNAP2-220ENST00000637555 SPATA31A3Q5VYP0 1347 aa17.03■□□□□ 0.32
CNTNAP2-220ENST00000637555 TNNT2P45379 298 aaPredicted RBP17.03■□□□□ 0.32
CNTNAP2-220ENST00000637555 COL22A1Q8NFW1 1626 aaPredicted RBP17.03■□□□□ 0.32
CNTNAP2-220ENST00000637555 USP19O94966 1318 aa17.02■□□□□ 0.31
CNTNAP2-220ENST00000637555 COL3A1P02461 1466 aaPredicted RBP17.02■□□□□ 0.31
CNTNAP2-220ENST00000637555 NLRP6P59044 892 aa17.02■□□□□ 0.31
CNTNAP2-220ENST00000637555 NUTM2GQ5VZR2 741 aa17.01■□□□□ 0.31
CNTNAP2-220ENST00000637555 PNISRQ8TF01 805 aaKnown RBP17.01■□□□□ 0.31
CNTNAP2-220ENST00000637555 MYT1Q01538 1121 aa17.01■□□□□ 0.31
CNTNAP2-220ENST00000637555 UBAP1LF5GYI3 381 aa17■□□□□ 0.31
CNTNAP2-220ENST00000637555 FBLN1P23142 703 aa17■□□□□ 0.31
CNTNAP2-220ENST00000637555 ARHGEF10O15013 1369 aa16.99■□□□□ 0.31
CNTNAP2-220ENST00000637555 CDK12Q9NYV4 1490 aaPredicted RBP16.99■□□□□ 0.31
CNTNAP2-220ENST00000637555 B4GALNT3Q6L9W6 998 aa16.98■□□□□ 0.31
CNTNAP2-220ENST00000637555 PPP4R2Q9NY27 417 aa16.98■□□□□ 0.31
CNTNAP2-220ENST00000637555 POLKQ9UBT6 870 aa16.98■□□□□ 0.31
CNTNAP2-220ENST00000637555 MTHFSP49914 203 aa16.98■□□□□ 0.31
CNTNAP2-220ENST00000637555 RGPD5Q99666 1765 aa16.98■□□□□ 0.31
CNTNAP2-220ENST00000637555 COL18A1P39060 1754 aa16.97■□□□□ 0.31
CNTNAP2-220ENST00000637555 PNPLA6Q8IY17 1366 aa16.97■□□□□ 0.31
CNTNAP2-220ENST00000637555 INSRP06213 1382 aa16.96■□□□□ 0.31
CNTNAP2-220ENST00000637555 PIP4K2BP78356 416 aa16.96■□□□□ 0.31
CNTNAP2-220ENST00000637555 ERICH6BQ5W0A0 696 aa16.96■□□□□ 0.3
CNTNAP2-220ENST00000637555 EMILIN1Q9Y6C2 1016 aa16.96■□□□□ 0.3
CNTNAP2-220ENST00000637555 LMOD2Q6P5Q4 547 aa16.95■□□□□ 0.3
CNTNAP2-220ENST00000637555 RGPD1P0DJD0 1748 aa16.95■□□□□ 0.3
CNTNAP2-220ENST00000637555 RRS1Q15050 365 aaKnown RBP16.95■□□□□ 0.3
CNTNAP2-220ENST00000637555 ANP32EQ9BTT0 268 aa16.94■□□□□ 0.3
CNTNAP2-220ENST00000637555 MAP3K19Q56UN5 1328 aa16.93■□□□□ 0.3
CNTNAP2-220ENST00000637555 SOX12O15370 315 aa16.92■□□□□ 0.3
CNTNAP2-220ENST00000637555 KCNH5Q8NCM2 988 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms