RNA–Protein interactions for RNA: ENST00000637540.1

SCN8A-213, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 93 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-213ENST00000637540 DMRT2Q9Y5R5 561 aa6.41□□□□□ -1.38
SCN8A-213ENST00000637540 EID1Q9Y6B2 187 aa6.41□□□□□ -1.38
SCN8A-213ENST00000637540 RGPD1P0DJD0 1748 aa6.41□□□□□ -1.38
SCN8A-213ENST00000637540 PEAK1Q9H792 1746 aa6.41□□□□□ -1.38
SCN8A-213ENST00000637540 AATKQ6ZMQ8 1374 aa6.41□□□□□ -1.38
SCN8A-213ENST00000637540 STRCP1A6NGW2 1772 aa6.41□□□□□ -1.38
SCN8A-213ENST00000637540 PIK3C2AO00443 1686 aa6.4□□□□□ -1.38
SCN8A-213ENST00000637540 APAF1O14727 1248 aa6.4□□□□□ -1.38
SCN8A-213ENST00000637540 WDR43Q15061 677 aaKnown RBP eCLIP6.4□□□□□ -1.38
SCN8A-213ENST00000637540 HDGFL2Q7Z4V5 671 aaPredicted RBP6.4□□□□□ -1.38
SCN8A-213ENST00000637540 PLEKHF1Q96S99 279 aa6.4□□□□□ -1.38
SCN8A-213ENST00000637540 SPINK5Q9NQ38 1064 aaPredicted RBP6.4□□□□□ -1.38
SCN8A-213ENST00000637540 OVOS2A0A0J9YW53 1432 aa6.4□□□□□ -1.39
SCN8A-213ENST00000637540 OVOS2Q6IE36 1432 aa6.4□□□□□ -1.39
SCN8A-213ENST00000637540 NEFLP07196 543 aa6.39□□□□□ -1.39
SCN8A-213ENST00000637540 IRX6P78412 446 aaPredicted RBP6.39□□□□□ -1.39
SCN8A-213ENST00000637540 ZNF692Q9BU19 519 aaPredicted RBP6.39□□□□□ -1.39
SCN8A-213ENST00000637540 POLKQ9UBT6 870 aa6.39□□□□□ -1.39
SCN8A-213ENST00000637540 ZRANB1Q9UGI0 708 aa6.39□□□□□ -1.39
SCN8A-213ENST00000637540 USP31Q70CQ4 1352 aa6.39□□□□□ -1.39
SCN8A-213ENST00000637540 USP6P35125 1406 aa6.39□□□□□ -1.39
SCN8A-213ENST00000637540 ANKARQ7Z5J8 1434 aa6.39□□□□□ -1.39
SCN8A-213ENST00000637540 CDK12Q9NYV4 1490 aaPredicted RBP6.39□□□□□ -1.39
SCN8A-213ENST00000637540 LRRC7Q96NW7 1537 aa6.39□□□□□ -1.39
SCN8A-213ENST00000637540 KCNA6P17658 529 aa6.38□□□□□ -1.39
SCN8A-213ENST00000637540 FBLN1P23142 703 aa6.38□□□□□ -1.39
SCN8A-213ENST00000637540 TNNT2P45379 298 aaPredicted RBP6.38□□□□□ -1.39
SCN8A-213ENST00000637540 CCDC27Q2M243 656 aa6.38□□□□□ -1.39
SCN8A-213ENST00000637540 WWC1Q8IX03 1113 aa6.38□□□□□ -1.39
SCN8A-213ENST00000637540 CCDC146Q8IYE0 955 aa6.38□□□□□ -1.39
SCN8A-213ENST00000637540 RUNDC1Q96C34 613 aa6.38□□□□□ -1.39
SCN8A-213ENST00000637540 BCANQ96GW7 911 aa6.38□□□□□ -1.39
SCN8A-213ENST00000637540 PPP4R2Q9NY27 417 aa6.38□□□□□ -1.39
SCN8A-213ENST00000637540 RCAN3Q9UKA8 241 aa6.38□□□□□ -1.39
SCN8A-213ENST00000637540 SALL2Q9Y467 1007 aaPredicted RBP6.38□□□□□ -1.39
SCN8A-213ENST00000637540 ACEP12821 1306 aa6.38□□□□□ -1.39
SCN8A-213ENST00000637540 TTC21BQ7Z4L5 1316 aa6.38□□□□□ -1.39
SCN8A-213ENST00000637540 XIRP1Q702N8 1843 aaKnown RBP6.38□□□□□ -1.39
SCN8A-213ENST00000637540 RRP1P56182 461 aaKnown RBP6.37□□□□□ -1.39
SCN8A-213ENST00000637540 GOLGA2Q08379 1002 aa6.37□□□□□ -1.39
SCN8A-213ENST00000637540 ANKLE2Q86XL3 938 aa6.37□□□□□ -1.39
SCN8A-213ENST00000637540 NME9Q86XW9 330 aa6.37□□□□□ -1.39
SCN8A-213ENST00000637540 TCP11L2Q8N4U5 519 aa6.37□□□□□ -1.39
SCN8A-213ENST00000637540 NPHP4O75161 1426 aaPredicted RBP6.36□□□□□ -1.39
SCN8A-213ENST00000637540 IL13P35225 146 aa6.36□□□□□ -1.39
SCN8A-213ENST00000637540 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.36□□□□□ -1.39
SCN8A-213ENST00000637540 STRCQ7RTU9 1775 aa6.36□□□□□ -1.39
SCN8A-213ENST00000637540 TRPM3Q9HCF6 1732 aaPredicted RBP6.36□□□□□ -1.39
SCN8A-213ENST00000637540 PHRF1Q9P1Y6 1649 aaKnown RBP6.36□□□□□ -1.39
SCN8A-213ENST00000637540 ADGRL3Q9HAR2 1447 aa6.35□□□□□ -1.39
SCN8A-213ENST00000637540 WDR63Q8IWG1 891 aa6.35□□□□□ -1.39
SCN8A-213ENST00000637540 CFAP53Q96M91 514 aa6.35□□□□□ -1.39
SCN8A-213ENST00000637540 RSPH6AQ9H0K4 717 aa6.35□□□□□ -1.39
SCN8A-213ENST00000637540 TSHZ2Q9NRE2 1034 aa6.35□□□□□ -1.39
SCN8A-213ENST00000637540 TRIM35Q9UPQ4 493 aa6.35□□□□□ -1.39
SCN8A-213ENST00000637540 EMILIN1Q9Y6C2 1016 aa6.35□□□□□ -1.39
SCN8A-213ENST00000637540 LTN1O94822 1766 aa6.34□□□□□ -1.39
SCN8A-213ENST00000637540 TTC21AQ8NDW8 1320 aa6.34□□□□□ -1.39
SCN8A-213ENST00000637540 E9PSI1 815 aa6.34□□□□□ -1.39
SCN8A-213ENST00000637540 DIAPH1O60610 1272 aaKnown RBP6.34□□□□□ -1.39
SCN8A-213ENST00000637540 TMPOP42166 694 aaKnown RBP6.34□□□□□ -1.39
SCN8A-213ENST00000637540 PLPPR3Q6T4P5 718 aa6.34□□□□□ -1.39
SCN8A-213ENST00000637540 FCHSD2O94868 740 aa6.33□□□□□ -1.4
SCN8A-213ENST00000637540 U2AF1L5P0DN76 240 aaPredicted RBP6.33□□□□□ -1.4
SCN8A-213ENST00000637540 U2AF1Q01081 240 aaKnown RBP eCLIP6.33□□□□□ -1.4
SCN8A-213ENST00000637540 EXOC6Q8TAG9 804 aa6.33□□□□□ -1.4
SCN8A-213ENST00000637540 RGPD2P0DJD1 1756 aa6.33□□□□□ -1.4
SCN8A-213ENST00000637540 ALS2Q96Q42 1657 aa6.33□□□□□ -1.4
SCN8A-213ENST00000637540 VIRMAQ69YN4 1812 aaKnown RBP6.32□□□□□ -1.4
SCN8A-213ENST00000637540 IL16Q14005 1332 aa6.32□□□□□ -1.4
SCN8A-213ENST00000637540 NFAT5O94916 1531 aa6.32□□□□□ -1.4
SCN8A-213ENST00000637540 PLIN1O60240 522 aa6.32□□□□□ -1.4
SCN8A-213ENST00000637540 C20orf194Q5TEA3 1177 aa6.32□□□□□ -1.4
SCN8A-213ENST00000637540 B4GALNT3Q6L9W6 998 aa6.32□□□□□ -1.4
SCN8A-213ENST00000637540 COG3Q96JB2 828 aa6.32□□□□□ -1.4
SCN8A-213ENST00000637540 RRP7AQ9Y3A4 280 aaKnown RBP6.32□□□□□ -1.4
SCN8A-213ENST00000637540 CRYBG1Q9Y4K1 1723 aa6.32□□□□□ -1.4
SCN8A-213ENST00000637540 MST1RQ04912 1400 aa6.32□□□□□ -1.4
SCN8A-213ENST00000637540 KIF1AQ12756 1690 aa6.31□□□□□ -1.4
SCN8A-213ENST00000637540 NUTM2FA1L443 756 aa6.31□□□□□ -1.4
SCN8A-213ENST00000637540 RRS1Q15050 365 aaKnown RBP6.31□□□□□ -1.4
SCN8A-213ENST00000637540 PMFBP1Q8TBY8 1022 aa6.31□□□□□ -1.4
SCN8A-213ENST00000637540 PHACTR3Q96KR7 559 aa6.31□□□□□ -1.4
SCN8A-213ENST00000637540 RGPD5Q99666 1765 aa6.31□□□□□ -1.4
SCN8A-213ENST00000637540 KDRP35968 1356 aa6.31□□□□□ -1.4
SCN8A-213ENST00000637540 KIF24Q5T7B8 1368 aa6.31□□□□□ -1.4
SCN8A-213ENST00000637540 SLIT3O75094 1523 aa6.3□□□□□ -1.4
SCN8A-213ENST00000637540 LRRC37A3O60309 1634 aa6.3□□□□□ -1.4
SCN8A-213ENST00000637540 KDM4FA0A1W2PPD8 638 aa6.3□□□□□ -1.4
SCN8A-213ENST00000637540 BCAR3O75815 825 aa6.3□□□□□ -1.4
SCN8A-213ENST00000637540 ZNF853P0CG23 659 aa6.3□□□□□ -1.4
SCN8A-213ENST00000637540 RARSP54136 660 aaKnown RBP6.3□□□□□ -1.4
SCN8A-213ENST00000637540 EIF4A2Q14240 407 aaKnown RBP6.3□□□□□ -1.4
SCN8A-213ENST00000637540 CRBNQ96SW2 442 aa6.3□□□□□ -1.4
SCN8A-213ENST00000637540 COL18A1P39060 1754 aa6.3□□□□□ -1.4
SCN8A-213ENST00000637540 NCOA3Q9Y6Q9 1424 aa6.3□□□□□ -1.4
SCN8A-213ENST00000637540 CAMTA1Q9Y6Y1 1673 aa6.3□□□□□ -1.4
SCN8A-213ENST00000637540 CACNA1FO60840 1977 aa6.29□□□□□ -1.4
SCN8A-213ENST00000637540 MAP3K19Q56UN5 1328 aa6.29□□□□□ -1.4
SCN8A-213ENST00000637540 LMTK3Q96Q04 1460 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms