RNA–Protein interactions for RNA: ENST00000637350.1

CHRNA7-227, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,241 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-227ENST00000637350 CPSF1Q10570 1443 aaKnown RBP22.29■■□□□ 1.16
CHRNA7-227ENST00000637350 TRMT2AQ8IZ69 625 aaKnown RBP22.29■■□□□ 1.16
CHRNA7-227ENST00000637350 IQSEC2Q5JU85 1478 aa22.29■■□□□ 1.16
CHRNA7-227ENST00000637350 GGNBP2Q9H3C7 697 aa22.27■■□□□ 1.16
CHRNA7-227ENST00000637350 PRR36Q9H6K5 1346 aa22.27■■□□□ 1.15
CHRNA7-227ENST00000637350 KCNA6P17658 529 aa22.26■■□□□ 1.15
CHRNA7-227ENST00000637350 CDC42BPGQ6DT37 1551 aa22.26■■□□□ 1.15
CHRNA7-227ENST00000637350 NKTRP30414 1462 aaKnown RBP22.26■■□□□ 1.15
CHRNA7-227ENST00000637350 KIF20BQ96Q89 1820 aa22.26■■□□□ 1.15
CHRNA7-227ENST00000637350 NCKAP5LQ9HCH0 1330 aa22.25■■□□□ 1.15
CHRNA7-227ENST00000637350 CHD2O14647 1828 aaKnown RBP22.25■■□□□ 1.15
CHRNA7-227ENST00000637350 EDC4Q6P2E9 1401 aaKnown RBP22.24■■□□□ 1.15
CHRNA7-227ENST00000637350 MTHFSP49914 203 aa22.23■■□□□ 1.15
CHRNA7-227ENST00000637350 NPHP4O75161 1426 aaPredicted RBP22.23■■□□□ 1.15
CHRNA7-227ENST00000637350 TOPAZ1Q8N9V7 1692 aa22.22■■□□□ 1.15
CHRNA7-227ENST00000637350 ITSN1Q15811 1721 aa22.22■■□□□ 1.15
CHRNA7-227ENST00000637350 MON2Q7Z3U7 1717 aa22.22■■□□□ 1.15
CHRNA7-227ENST00000637350 AKAP12Q02952 1782 aa22.22■■□□□ 1.15
CHRNA7-227ENST00000637350 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.22■■□□□ 1.15
CHRNA7-227ENST00000637350 ZNF692Q9BU19 519 aaPredicted RBP22.22■■□□□ 1.15
CHRNA7-227ENST00000637350 SKAP1Q86WV1 359 aa22.21■■□□□ 1.15
CHRNA7-227ENST00000637350 CFAP53Q96M91 514 aa22.21■■□□□ 1.15
CHRNA7-227ENST00000637350 PLEKHG3A1L390 1219 aa22.19■■□□□ 1.14
CHRNA7-227ENST00000637350 NUTM2FA1L443 756 aa22.19■■□□□ 1.14
CHRNA7-227ENST00000637350 E9PSI1 815 aa22.18■■□□□ 1.14
CHRNA7-227ENST00000637350 WWC1Q8IX03 1113 aa22.18■■□□□ 1.14
CHRNA7-227ENST00000637350 RRP7AQ9Y3A4 280 aaKnown RBP22.17■■□□□ 1.14
CHRNA7-227ENST00000637350 BCAR3O75815 825 aa22.15■■□□□ 1.14
CHRNA7-227ENST00000637350 ACEP12821 1306 aa22.15■■□□□ 1.14
CHRNA7-227ENST00000637350 COL3A1P02461 1466 aaPredicted RBP22.15■■□□□ 1.14
CHRNA7-227ENST00000637350 RUNDC1Q96C34 613 aa22.14■■□□□ 1.14
CHRNA7-227ENST00000637350 KDM2BQ8NHM5 1336 aa22.14■■□□□ 1.13
CHRNA7-227ENST00000637350 NEUROD2Q15784 382 aa22.14■■□□□ 1.13
CHRNA7-227ENST00000637350 TCERG1O14776 1098 aaKnown RBP22.13■■□□□ 1.13
CHRNA7-227ENST00000637350 NME9Q86XW9 330 aa22.13■■□□□ 1.13
CHRNA7-227ENST00000637350 TCP11L2Q8N4U5 519 aa22.12■■□□□ 1.13
CHRNA7-227ENST00000637350 NGEFQ8N5V2 710 aa22.12■■□□□ 1.13
CHRNA7-227ENST00000637350 RGPD8O14715 1765 aaPredicted RBP22.12■■□□□ 1.13
CHRNA7-227ENST00000637350 ANKARQ7Z5J8 1434 aa22.12■■□□□ 1.13
CHRNA7-227ENST00000637350 NRKQ7Z2Y5 1582 aa22.11■■□□□ 1.13
CHRNA7-227ENST00000637350 PHF23Q9BUL5 403 aaPredicted RBP22.11■■□□□ 1.13
CHRNA7-227ENST00000637350 NALCNQ8IZF0 1738 aa22.1■■□□□ 1.13
CHRNA7-227ENST00000637350 FMN2Q9NZ56 1722 aa22.1■■□□□ 1.13
CHRNA7-227ENST00000637350 USP6P35125 1406 aa22.1■■□□□ 1.13
CHRNA7-227ENST00000637350 COG3Q96JB2 828 aa22.1■■□□□ 1.13
CHRNA7-227ENST00000637350 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.09■■□□□ 1.13
CHRNA7-227ENST00000637350 TTC21BQ7Z4L5 1316 aa22.08■■□□□ 1.13
CHRNA7-227ENST00000637350 PMFBP1Q8TBY8 1022 aa22.08■■□□□ 1.13
CHRNA7-227ENST00000637350 MAP2P11137 1827 aaKnown RBP22.07■■□□□ 1.12
CHRNA7-227ENST00000637350 PNPLA6Q8IY17 1366 aa22.07■■□□□ 1.12
CHRNA7-227ENST00000637350 NWD1Q149M9 1564 aa22.07■■□□□ 1.12
CHRNA7-227ENST00000637350 ZRANB1Q9UGI0 708 aa22.07■■□□□ 1.12
CHRNA7-227ENST00000637350 ADGRL3Q9HAR2 1447 aa22.06■■□□□ 1.12
CHRNA7-227ENST00000637350 PDE4AP27815 886 aa22.06■■□□□ 1.12
CHRNA7-227ENST00000637350 ERICH6Q7L0X2 663 aa22.06■■□□□ 1.12
CHRNA7-227ENST00000637350 AATKQ6ZMQ8 1374 aa22.06■■□□□ 1.12
CHRNA7-227ENST00000637350 NGDNQ8NEJ9 315 aaKnown RBP22.06■■□□□ 1.12
CHRNA7-227ENST00000637350 POLKQ9UBT6 870 aa22.06■■□□□ 1.12
CHRNA7-227ENST00000637350 SSH2Q76I76 1423 aa22.05■■□□□ 1.12
CHRNA7-227ENST00000637350 PAK3O75914 559 aaPredicted RBP22.05■■□□□ 1.12
CHRNA7-227ENST00000637350 U2AF1L5P0DN76 240 aaPredicted RBP22.04■■□□□ 1.12
CHRNA7-227ENST00000637350 MS4A1P11836 297 aa22.04■■□□□ 1.12
CHRNA7-227ENST00000637350 U2AF1Q01081 240 aaKnown RBP eCLIP22.04■■□□□ 1.12
CHRNA7-227ENST00000637350 RBM33Q96EV2 1170 aaKnown RBP22.04■■□□□ 1.12
CHRNA7-227ENST00000637350 BACH2Q9BYV9 841 aa22.04■■□□□ 1.12
CHRNA7-227ENST00000637350 FBLN1P23142 703 aa22.03■■□□□ 1.12
CHRNA7-227ENST00000637350 TTC21AQ8NDW8 1320 aa22.02■■□□□ 1.12
CHRNA7-227ENST00000637350 DIAPH1O60610 1272 aaKnown RBP22.02■■□□□ 1.12
CHRNA7-227ENST00000637350 ANP32AP39687 249 aaKnown RBP22.02■■□□□ 1.12
CHRNA7-227ENST00000637350 NOP58Q9Y2X3 529 aaKnown RBP22.02■■□□□ 1.12
CHRNA7-227ENST00000637350 CENPQQ7L2Z9 268 aaPredicted RBP22.02■■□□□ 1.11
CHRNA7-227ENST00000637350 PPM1GO15355 546 aaPredicted RBP22.01■■□□□ 1.11
CHRNA7-227ENST00000637350 OVOS2A0A0J9YW53 1432 aa22.01■■□□□ 1.11
CHRNA7-227ENST00000637350 OVOS2Q6IE36 1432 aa22.01■■□□□ 1.11
CHRNA7-227ENST00000637350 U2SURPO15042 1029 aaKnown RBP22■■□□□ 1.11
CHRNA7-227ENST00000637350 CCDC27Q2M243 656 aa22■■□□□ 1.11
CHRNA7-227ENST00000637350 C14orf37Q86TY3 774 aa22■■□□□ 1.11
CHRNA7-227ENST00000637350 HSPA2P54652 639 aa21.99■■□□□ 1.11
CHRNA7-227ENST00000637350 WDR63Q8IWG1 891 aa21.99■■□□□ 1.11
CHRNA7-227ENST00000637350 IPO9Q96P70 1041 aaKnown RBP21.99■■□□□ 1.11
CHRNA7-227ENST00000637350 EMILIN1Q9Y6C2 1016 aa21.99■■□□□ 1.11
CHRNA7-227ENST00000637350 PLEKHF1Q96S99 279 aa21.98■■□□□ 1.11
CHRNA7-227ENST00000637350 CDK12Q9NYV4 1490 aaPredicted RBP21.98■■□□□ 1.11
CHRNA7-227ENST00000637350 NPM2Q86SE8 214 aaKnown RBP21.98■■□□□ 1.11
CHRNA7-227ENST00000637350 PROSER2Q86WR7 435 aaPredicted RBP21.98■■□□□ 1.11
CHRNA7-227ENST00000637350 PANK1Q8TE04 598 aa21.98■■□□□ 1.11
CHRNA7-227ENST00000637350 LRRC7Q96NW7 1537 aa21.97■■□□□ 1.11
CHRNA7-227ENST00000637350 RARSP54136 660 aaKnown RBP21.97■■□□□ 1.11
CHRNA7-227ENST00000637350 VIRMAQ69YN4 1812 aaKnown RBP21.97■■□□□ 1.11
CHRNA7-227ENST00000637350 PHF8Q9UPP1 1060 aa21.96■■□□□ 1.11
CHRNA7-227ENST00000637350 TNNQ9UQP3 1299 aa21.96■■□□□ 1.11
CHRNA7-227ENST00000637350 RRS1Q15050 365 aaKnown RBP21.95■■□□□ 1.1
CHRNA7-227ENST00000637350 USP31Q70CQ4 1352 aa21.95■■□□□ 1.1
CHRNA7-227ENST00000637350 LMTK3Q96Q04 1460 aa21.94■■□□□ 1.1
CHRNA7-227ENST00000637350 PDE3AQ14432 1141 aa21.94■■□□□ 1.1
CHRNA7-227ENST00000637350 BCL2L13Q9BXK5 485 aa21.94■■□□□ 1.1
CHRNA7-227ENST00000637350 COG6Q9Y2V7 657 aa21.94■■□□□ 1.1
CHRNA7-227ENST00000637350 NCBP3Q53F19 620 aaKnown RBP21.93■■□□□ 1.1
CHRNA7-227ENST00000637350 FRAT1Q92837 279 aaPredicted RBP21.93■■□□□ 1.1
CHRNA7-227ENST00000637350 PNNQ9H307 717 aaKnown RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms