RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 PRKRIP1Q9H875 184 aaPredicted RBP11.17□□□□□ -0.62
CACNA1A-232ENST00000636966 DCCP43146 1447 aa11.17□□□□□ -0.62
CACNA1A-232ENST00000636966 PPIP5K1Q6PFW1 1433 aa11.17□□□□□ -0.62
CACNA1A-232ENST00000636966 CDCA8Q53HL2 280 aa11.16□□□□□ -0.62
CACNA1A-232ENST00000636966 PROSER2Q86WR7 435 aaPredicted RBP11.16□□□□□ -0.62
CACNA1A-232ENST00000636966 CPSF1Q10570 1443 aaKnown RBP11.16□□□□□ -0.62
CACNA1A-232ENST00000636966 ANKRD36BQ8N2N9 1353 aa11.15□□□□□ -0.62
CACNA1A-232ENST00000636966 ATAD2Q6PL18 1390 aa11.15□□□□□ -0.62
CACNA1A-232ENST00000636966 PIK3C2AO00443 1686 aa11.15□□□□□ -0.63
CACNA1A-232ENST00000636966 NSD3Q9BZ95 1437 aa11.15□□□□□ -0.63
CACNA1A-232ENST00000636966 CC2D1BQ5T0F9 858 aaKnown RBP11.15□□□□□ -0.63
CACNA1A-232ENST00000636966 WNK3Q9BYP7 1800 aa11.15□□□□□ -0.63
CACNA1A-232ENST00000636966 CCDC61Q9Y6R9 512 aa11.14□□□□□ -0.63
CACNA1A-232ENST00000636966 PMFBP1Q8TBY8 1022 aa11.14□□□□□ -0.63
CACNA1A-232ENST00000636966 FKBP8Q14318 412 aa11.13□□□□□ -0.63
CACNA1A-232ENST00000636966 ORAI2Q96SN7 254 aa11.13□□□□□ -0.63
CACNA1A-232ENST00000636966 SSH2Q76I76 1423 aa11.13□□□□□ -0.63
CACNA1A-232ENST00000636966 NPC1L1Q9UHC9 1359 aa11.13□□□□□ -0.63
CACNA1A-232ENST00000636966 FAM9BQ8IZU0 186 aa11.13□□□□□ -0.63
CACNA1A-232ENST00000636966 DCAF8L1A6NGE4 600 aa11.13□□□□□ -0.63
CACNA1A-232ENST00000636966 PARD3Q8TEW0 1356 aa11.12□□□□□ -0.63
CACNA1A-232ENST00000636966 ERICH6Q7L0X2 663 aa11.12□□□□□ -0.63
CACNA1A-232ENST00000636966 ZRANB1Q9UGI0 708 aa11.12□□□□□ -0.63
CACNA1A-232ENST00000636966 MRS2Q9HD23 443 aa11.12□□□□□ -0.63
CACNA1A-232ENST00000636966 ACEP12821 1306 aa11.12□□□□□ -0.63
CACNA1A-232ENST00000636966 INSRP06213 1382 aa11.12□□□□□ -0.63
CACNA1A-232ENST00000636966 PLEKHG3A1L390 1219 aa11.11□□□□□ -0.63
CACNA1A-232ENST00000636966 FBLN1P23142 703 aa11.11□□□□□ -0.63
CACNA1A-232ENST00000636966 C19orf44Q9H6X5 657 aa11.11□□□□□ -0.63
CACNA1A-232ENST00000636966 SMG6Q86US8 1419 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-232ENST00000636966 ADAMTS7Q9UKP4 1686 aa11.11□□□□□ -0.63
CACNA1A-232ENST00000636966 DDX17Q92841 729 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-232ENST00000636966 COL18A1P39060 1754 aa11.1□□□□□ -0.63
CACNA1A-232ENST00000636966 FYB1O15117 783 aa11.1□□□□□ -0.63
CACNA1A-232ENST00000636966 SUPT16HQ9Y5B9 1047 aaKnown RBP11.1□□□□□ -0.63
CACNA1A-232ENST00000636966 POLR3AO14802 1390 aaPredicted RBP11.1□□□□□ -0.63
CACNA1A-232ENST00000636966 C1orf167Q5SNV9 1468 aa11.1□□□□□ -0.63
CACNA1A-232ENST00000636966 NINLQ9Y2I6 1382 aa11.1□□□□□ -0.63
CACNA1A-232ENST00000636966 ANKARQ7Z5J8 1434 aa11.09□□□□□ -0.63
CACNA1A-232ENST00000636966 AHDC1Q5TGY3 1603 aaPredicted RBP11.09□□□□□ -0.63
CACNA1A-232ENST00000636966 C14orf37Q86TY3 774 aa11.09□□□□□ -0.63
CACNA1A-232ENST00000636966 KNSTRNQ9Y448 316 aa11.09□□□□□ -0.63
CACNA1A-232ENST00000636966 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.09□□□□□ -0.63
CACNA1A-232ENST00000636966 KTN1Q86UP2 1357 aaKnown RBP11.08□□□□□ -0.63
CACNA1A-232ENST00000636966 GGNBP2Q9H3C7 697 aa11.08□□□□□ -0.64
CACNA1A-232ENST00000636966 FAM208AQ9UK61 1670 aaKnown RBP11.08□□□□□ -0.64
CACNA1A-232ENST00000636966 NME9Q86XW9 330 aa11.08□□□□□ -0.64
CACNA1A-232ENST00000636966 USP6P35125 1406 aa11.08□□□□□ -0.64
CACNA1A-232ENST00000636966 PLCH1Q4KWH8 1693 aa11.08□□□□□ -0.64
CACNA1A-232ENST00000636966 ESCO1Q5FWF5 840 aa11.07□□□□□ -0.64
CACNA1A-232ENST00000636966 XPCQ01831 940 aaPredicted RBP11.07□□□□□ -0.64
CACNA1A-232ENST00000636966 SLIT3O75094 1523 aa11.07□□□□□ -0.64
CACNA1A-232ENST00000636966 TERF2IPQ9NYB0 399 aa11.06□□□□□ -0.64
CACNA1A-232ENST00000636966 FOXO3O43524 673 aa11.06□□□□□ -0.64
CACNA1A-232ENST00000636966 TNNT2P45379 298 aaPredicted RBP11.06□□□□□ -0.64
CACNA1A-232ENST00000636966 EDC4Q6P2E9 1401 aaKnown RBP11.06□□□□□ -0.64
CACNA1A-232ENST00000636966 PHF8Q9UPP1 1060 aa11.05□□□□□ -0.64
CACNA1A-232ENST00000636966 PPP2R1AP30153 589 aa11.04□□□□□ -0.64
CACNA1A-232ENST00000636966 TTC21BQ7Z4L5 1316 aa11.04□□□□□ -0.64
CACNA1A-232ENST00000636966 HDGFL2Q7Z4V5 671 aaPredicted RBP11.04□□□□□ -0.64
CACNA1A-232ENST00000636966 CGNL1Q0VF96 1302 aa11.04□□□□□ -0.64
CACNA1A-232ENST00000636966 BRD4O60885 1362 aaPredicted RBP11.04□□□□□ -0.64
CACNA1A-232ENST00000636966 MSH6P52701 1360 aa11.04□□□□□ -0.64
CACNA1A-232ENST00000636966 BRINP3Q76B58 766 aa11.03□□□□□ -0.64
CACNA1A-232ENST00000636966 CICQ96RK0 1608 aaPredicted RBP11.03□□□□□ -0.64
CACNA1A-232ENST00000636966 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.03□□□□□ -0.64
CACNA1A-232ENST00000636966 ATF3P18847 181 aa11.03□□□□□ -0.64
CACNA1A-232ENST00000636966 NGDNQ8NEJ9 315 aaKnown RBP11.03□□□□□ -0.64
CACNA1A-232ENST00000636966 MYBBP1AQ9BQG0 1328 aaKnown RBP11.03□□□□□ -0.64
CACNA1A-232ENST00000636966 RALBP1Q15311 655 aa11.03□□□□□ -0.64
CACNA1A-232ENST00000636966 SLAIN2Q9P270 581 aa11.03□□□□□ -0.64
CACNA1A-232ENST00000636966 NUTM2GQ5VZR2 741 aa11.02□□□□□ -0.65
CACNA1A-232ENST00000636966 CADPS2Q86UW7 1296 aa11.02□□□□□ -0.65
CACNA1A-232ENST00000636966 OVOS2A0A0J9YW53 1432 aa11.02□□□□□ -0.65
CACNA1A-232ENST00000636966 NCAPD2Q15021 1401 aa11.02□□□□□ -0.65
CACNA1A-232ENST00000636966 OVOS2Q6IE36 1432 aa11.02□□□□□ -0.65
CACNA1A-232ENST00000636966 ZNF692Q9BU19 519 aaPredicted RBP11.02□□□□□ -0.65
CACNA1A-232ENST00000636966 COL3A1P02461 1466 aaPredicted RBP11□□□□□ -0.65
CACNA1A-232ENST00000636966 PXDNQ92626 1479 aa11□□□□□ -0.65
CACNA1A-232ENST00000636966 SENP3-EIF4A1A0A087X0R7 540 aa11□□□□□ -0.65
CACNA1A-232ENST00000636966 NRAPQ86VF7 1730 aa11□□□□□ -0.65
CACNA1A-232ENST00000636966 MORC1Q86VD1 984 aa11□□□□□ -0.65
CACNA1A-232ENST00000636966 PNISRQ8TF01 805 aaKnown RBP11□□□□□ -0.65
CACNA1A-232ENST00000636966 PEAK1Q9H792 1746 aa10.99□□□□□ -0.65
CACNA1A-232ENST00000636966 VIRMAQ69YN4 1812 aaKnown RBP10.99□□□□□ -0.65
CACNA1A-232ENST00000636966 LRRC37A3O60309 1634 aa10.99□□□□□ -0.65
CACNA1A-232ENST00000636966 PARP4Q9UKK3 1724 aaKnown RBP10.99□□□□□ -0.65
CACNA1A-232ENST00000636966 IRX6P78412 446 aaPredicted RBP10.99□□□□□ -0.65
CACNA1A-232ENST00000636966 NFAT5O94916 1531 aa10.98□□□□□ -0.65
CACNA1A-232ENST00000636966 NLRP13Q86W25 1043 aa10.98□□□□□ -0.65
CACNA1A-232ENST00000636966 NSD2O96028 1365 aa10.98□□□□□ -0.65
CACNA1A-232ENST00000636966 PLEKHG2Q9H7P9 1386 aa10.98□□□□□ -0.65
CACNA1A-232ENST00000636966 MTHFSP49914 203 aa10.98□□□□□ -0.65
CACNA1A-232ENST00000636966 RRS1Q15050 365 aaKnown RBP10.98□□□□□ -0.65
CACNA1A-232ENST00000636966 POLKQ9UBT6 870 aa10.98□□□□□ -0.65
CACNA1A-232ENST00000636966 SHANK3Q9BYB0 1731 aa10.98□□□□□ -0.65
CACNA1A-232ENST00000636966 PSME1Q06323 249 aa10.98□□□□□ -0.65
CACNA1A-232ENST00000636966 EMILIN1Q9Y6C2 1016 aa10.98□□□□□ -0.65
CACNA1A-232ENST00000636966 PAK3O75914 559 aaPredicted RBP10.97□□□□□ -0.65
CACNA1A-232ENST00000636966 MAP2P11137 1827 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms