RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 MVPQ14764 893 aaKnown RBP20.56■□□□□ 0.88
CHRNA7-221ENST00000636898 HDGFL2Q7Z4V5 671 aaPredicted RBP20.56■□□□□ 0.88
CHRNA7-221ENST00000636898 BCL2L13Q9BXK5 485 aa20.56■□□□□ 0.88
CHRNA7-221ENST00000636898 PNNQ9H307 717 aaKnown RBP20.56■□□□□ 0.88
CHRNA7-221ENST00000636898 RWDD1Q9H446 243 aaPredicted RBP20.56■□□□□ 0.88
CHRNA7-221ENST00000636898 DLC1Q96QB1 1528 aa20.56■□□□□ 0.88
CHRNA7-221ENST00000636898 USP19O94966 1318 aa20.55■□□□□ 0.88
CHRNA7-221ENST00000636898 CDC42BPGQ6DT37 1551 aa20.55■□□□□ 0.88
CHRNA7-221ENST00000636898 U2SURPO15042 1029 aaKnown RBP20.55■□□□□ 0.88
CHRNA7-221ENST00000636898 TRIM35Q9UPQ4 493 aa20.55■□□□□ 0.88
CHRNA7-221ENST00000636898 AGLP35573 1532 aa20.54■□□□□ 0.88
CHRNA7-221ENST00000636898 SLC4A3P48751 1232 aa20.54■□□□□ 0.88
CHRNA7-221ENST00000636898 TNNQ9UQP3 1299 aa20.54■□□□□ 0.88
CHRNA7-221ENST00000636898 NFKBIBQ15653 356 aa20.53■□□□□ 0.88
CHRNA7-221ENST00000636898 DZIP1LQ8IYY4 767 aaKnown RBP20.53■□□□□ 0.88
CHRNA7-221ENST00000636898 FBXO31Q5XUX0 539 aaPredicted RBP20.52■□□□□ 0.88
CHRNA7-221ENST00000636898 CDK19Q9BWU1 502 aa20.52■□□□□ 0.88
CHRNA7-221ENST00000636898 DIAPH1O60610 1272 aaKnown RBP20.52■□□□□ 0.87
CHRNA7-221ENST00000636898 FTSJ3Q8IY81 847 aaKnown RBP20.52■□□□□ 0.87
CHRNA7-221ENST00000636898 ATP7BP35670 1465 aa20.51■□□□□ 0.87
CHRNA7-221ENST00000636898 TSR2Q969E8 191 aaKnown RBP20.5■□□□□ 0.87
CHRNA7-221ENST00000636898 EXOSC9Q06265 439 aaKnown RBP20.5■□□□□ 0.87
CHRNA7-221ENST00000636898 PDZRN3Q9UPQ7 1066 aa20.5■□□□□ 0.87
CHRNA7-221ENST00000636898 SPATA31D1Q6ZQQ2 1576 aa20.49■□□□□ 0.87
CHRNA7-221ENST00000636898 SMC4Q9NTJ3 1288 aa20.49■□□□□ 0.87
CHRNA7-221ENST00000636898 SETD1AO15047 1707 aaKnown RBP20.49■□□□□ 0.87
CHRNA7-221ENST00000636898 A2ML1A8K2U0 1454 aa20.48■□□□□ 0.87
CHRNA7-221ENST00000636898 CABP1Q9NZU7 370 aa20.48■□□□□ 0.87
CHRNA7-221ENST00000636898 STAG3Q9UJ98 1225 aa20.48■□□□□ 0.87
CHRNA7-221ENST00000636898 FCHSD2O94868 740 aa20.47■□□□□ 0.87
CHRNA7-221ENST00000636898 DIP2BQ9P265 1576 aa20.47■□□□□ 0.87
CHRNA7-221ENST00000636898 RIPK4P57078 832 aa20.47■□□□□ 0.87
CHRNA7-221ENST00000636898 DDX19BQ9UMR2 479 aa20.47■□□□□ 0.87
CHRNA7-221ENST00000636898 SEC24BO95487 1268 aa20.46■□□□□ 0.87
CHRNA7-221ENST00000636898 TRIM27P14373 513 aa20.46■□□□□ 0.87
CHRNA7-221ENST00000636898 ATF7IPQ6VMQ6 1270 aa20.46■□□□□ 0.87
CHRNA7-221ENST00000636898 SSH1Q8WYL5 1049 aa20.46■□□□□ 0.87
CHRNA7-221ENST00000636898 HDAC1Q13547 482 aaPredicted RBP20.46■□□□□ 0.87
CHRNA7-221ENST00000636898 UPF2Q9HAU5 1272 aaKnown RBP20.46■□□□□ 0.87
CHRNA7-221ENST00000636898 LRRC7Q96NW7 1537 aa20.45■□□□□ 0.86
CHRNA7-221ENST00000636898 RIMBP3CA6NJZ7 1639 aa20.45■□□□□ 0.86
CHRNA7-221ENST00000636898 RIMBP3BA6NNM3 1639 aa20.45■□□□□ 0.86
CHRNA7-221ENST00000636898 RIMBP3Q9UFD9 1639 aa20.45■□□□□ 0.86
CHRNA7-221ENST00000636898 BECN1Q14457 450 aa20.45■□□□□ 0.86
CHRNA7-221ENST00000636898 KIF16BQ96L93 1317 aa20.45■□□□□ 0.86
CHRNA7-221ENST00000636898 SENP3Q9H4L4 574 aaPredicted RBP20.44■□□□□ 0.86
CHRNA7-221ENST00000636898 FAM135BQ49AJ0 1406 aa20.44■□□□□ 0.86
CHRNA7-221ENST00000636898 RIMS2Q9UQ26 1411 aa20.44■□□□□ 0.86
CHRNA7-221ENST00000636898 ZNF428Q96B54 188 aa20.43■□□□□ 0.86
CHRNA7-221ENST00000636898 PPIP5K1Q6PFW1 1433 aa20.43■□□□□ 0.86
CHRNA7-221ENST00000636898 ALDH1L2Q3SY69 923 aa20.42■□□□□ 0.86
CHRNA7-221ENST00000636898 IPO8O15397 1037 aaKnown RBP20.42■□□□□ 0.86
CHRNA7-221ENST00000636898 GSE1Q14687 1217 aa20.42■□□□□ 0.86
CHRNA7-221ENST00000636898 FAM69CQ0P6D2 419 aa20.41■□□□□ 0.86
CHRNA7-221ENST00000636898 TBC1D32Q96NH3 1257 aa20.41■□□□□ 0.86
CHRNA7-221ENST00000636898 RSPH6AQ9H0K4 717 aa20.41■□□□□ 0.86
CHRNA7-221ENST00000636898 POLKQ9UBT6 870 aa20.41■□□□□ 0.86
CHRNA7-221ENST00000636898 NOB1Q9ULX3 412 aaKnown RBP20.41■□□□□ 0.86
CHRNA7-221ENST00000636898 CPSF1Q10570 1443 aaKnown RBP20.4■□□□□ 0.86
CHRNA7-221ENST00000636898 BRPF1P55201 1214 aaPredicted RBP20.4■□□□□ 0.86
CHRNA7-221ENST00000636898 EDC4Q6P2E9 1401 aaKnown RBP20.4■□□□□ 0.86
CHRNA7-221ENST00000636898 MAP2P11137 1827 aaKnown RBP20.4■□□□□ 0.86
CHRNA7-221ENST00000636898 CYB5RLQ6IPT4 315 aa20.39■□□□□ 0.86
CHRNA7-221ENST00000636898 ITPRIPQ8IWB1 547 aa20.39■□□□□ 0.86
CHRNA7-221ENST00000636898 NRXN3Q9Y4C0 1643 aa20.38■□□□□ 0.85
CHRNA7-221ENST00000636898 WAPLQ7Z5K2 1190 aa20.38■□□□□ 0.85
CHRNA7-221ENST00000636898 SMC5Q8IY18 1101 aa20.38■□□□□ 0.85
CHRNA7-221ENST00000636898 ZBTB40Q9NUA8 1239 aa20.38■□□□□ 0.85
CHRNA7-221ENST00000636898 PRKAR2BP31323 418 aa20.37■□□□□ 0.85
CHRNA7-221ENST00000636898 CALD1Q05682 793 aaKnown RBP20.37■□□□□ 0.85
CHRNA7-221ENST00000636898 CDK12Q9NYV4 1490 aaPredicted RBP20.37■□□□□ 0.85
CHRNA7-221ENST00000636898 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.36■□□□□ 0.85
CHRNA7-221ENST00000636898 AATKQ6ZMQ8 1374 aa20.36■□□□□ 0.85
CHRNA7-221ENST00000636898 TMEM57Q8N5G2 664 aa20.36■□□□□ 0.85
CHRNA7-221ENST00000636898 TSPOAP1O95153 1857 aa20.36■□□□□ 0.85
CHRNA7-221ENST00000636898 KNDC1Q76NI1 1749 aa20.36■□□□□ 0.85
CHRNA7-221ENST00000636898 NFE2L2Q16236 605 aa20.35■□□□□ 0.85
CHRNA7-221ENST00000636898 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.35■□□□□ 0.85
CHRNA7-221ENST00000636898 WASLO00401 505 aaPredicted RBP20.34■□□□□ 0.85
CHRNA7-221ENST00000636898 FRAT2O75474 233 aaPredicted RBP20.34■□□□□ 0.85
CHRNA7-221ENST00000636898 SIRT1Q96EB6 747 aa20.33■□□□□ 0.85
CHRNA7-221ENST00000636898 MON2Q7Z3U7 1717 aa20.33■□□□□ 0.84
CHRNA7-221ENST00000636898 TECPR2O15040 1411 aa20.33■□□□□ 0.84
CHRNA7-221ENST00000636898 ARHGAP45Q92619 1136 aa20.31■□□□□ 0.84
CHRNA7-221ENST00000636898 CHMP4BQ9H444 224 aaKnown RBP20.31■□□□□ 0.84
CHRNA7-221ENST00000636898 IL13P35225 146 aa20.31■□□□□ 0.84
CHRNA7-221ENST00000636898 IFT57Q9NWB7 429 aa20.3■□□□□ 0.84
CHRNA7-221ENST00000636898 PIK3R4Q99570 1358 aa20.3■□□□□ 0.84
CHRNA7-221ENST00000636898 GNAI1P63096 354 aa20.3■□□□□ 0.84
CHRNA7-221ENST00000636898 ANTXR1Q9H6X2 564 aa20.3■□□□□ 0.84
CHRNA7-221ENST00000636898 METP08581 1390 aa20.3■□□□□ 0.84
CHRNA7-221ENST00000636898 PTCH1Q13635 1447 aa20.29■□□□□ 0.84
CHRNA7-221ENST00000636898 CPS1P31327 1500 aa20.29■□□□□ 0.84
CHRNA7-221ENST00000636898 PHACTR3Q96KR7 559 aa20.29■□□□□ 0.84
CHRNA7-221ENST00000636898 AKAP12Q02952 1782 aa20.29■□□□□ 0.84
CHRNA7-221ENST00000636898 ZNF853P0CG23 659 aa20.28■□□□□ 0.84
CHRNA7-221ENST00000636898 FBLN1P23142 703 aa20.28■□□□□ 0.84
CHRNA7-221ENST00000636898 NUCB1Q02818 461 aa20.28■□□□□ 0.84
CHRNA7-221ENST00000636898 LMOD3Q0VAK6 560 aa20.28■□□□□ 0.84
CHRNA7-221ENST00000636898 TBC1D2Q9BYX2 928 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms