RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 MS4A4AQ96JQ5 239 aa9.68□□□□□ -0.86
UPF3B-205ENST00000636792 STRCQ7RTU9 1775 aa9.68□□□□□ -0.86
UPF3B-205ENST00000636792 TRPM1Q7Z4N2 1603 aa9.67□□□□□ -0.86
UPF3B-205ENST00000636792 NRXN3Q9Y4C0 1643 aa9.67□□□□□ -0.86
UPF3B-205ENST00000636792 EID1Q9Y6B2 187 aa9.67□□□□□ -0.86
UPF3B-205ENST00000636792 KNDC1Q76NI1 1749 aa9.67□□□□□ -0.86
UPF3B-205ENST00000636792 PRAG1Q86YV5 1406 aa9.66□□□□□ -0.86
UPF3B-205ENST00000636792 ZEB1P37275 1124 aaPredicted RBP9.66□□□□□ -0.86
UPF3B-205ENST00000636792 PIK3R4Q99570 1358 aa9.65□□□□□ -0.86
UPF3B-205ENST00000636792 ZNF316A6NFI3 1004 aaPredicted RBP9.65□□□□□ -0.86
UPF3B-205ENST00000636792 ZNF326Q5BKZ1 582 aaKnown RBP9.65□□□□□ -0.86
UPF3B-205ENST00000636792 RALGAPBQ86X10 1494 aa9.65□□□□□ -0.87
UPF3B-205ENST00000636792 NWD1Q149M9 1564 aa9.64□□□□□ -0.87
UPF3B-205ENST00000636792 CHGAP10645 457 aaKnown RBP9.64□□□□□ -0.87
UPF3B-205ENST00000636792 NLRP6P59044 892 aa9.64□□□□□ -0.87
UPF3B-205ENST00000636792 ANKLE2Q86XL3 938 aa9.64□□□□□ -0.87
UPF3B-205ENST00000636792 NPHP4O75161 1426 aaPredicted RBP9.64□□□□□ -0.87
UPF3B-205ENST00000636792 ALKQ9UM73 1620 aa9.64□□□□□ -0.87
UPF3B-205ENST00000636792 SIN3AQ96ST3 1273 aa9.63□□□□□ -0.87
UPF3B-205ENST00000636792 TAOK2Q9UL54 1235 aa9.63□□□□□ -0.87
UPF3B-205ENST00000636792 CHD2O14647 1828 aaKnown RBP9.62□□□□□ -0.87
UPF3B-205ENST00000636792 PPP1R15AO75807 674 aaPredicted RBP9.62□□□□□ -0.87
UPF3B-205ENST00000636792 LSM11P83369 360 aaKnown RBP eCLIP9.62□□□□□ -0.87
UPF3B-205ENST00000636792 L3MBTL2Q969R5 705 aa9.62□□□□□ -0.87
UPF3B-205ENST00000636792 RNF25Q96BH1 459 aaPredicted RBP9.62□□□□□ -0.87
UPF3B-205ENST00000636792 XRN1Q8IZH2 1706 aaKnown RBP9.62□□□□□ -0.87
UPF3B-205ENST00000636792 GPRASP1Q5JY77 1395 aa9.62□□□□□ -0.87
UPF3B-205ENST00000636792 NEUROD1Q13562 356 aa9.61□□□□□ -0.87
UPF3B-205ENST00000636792 DCAF11Q8TEB1 546 aa9.61□□□□□ -0.87
UPF3B-205ENST00000636792 ADAMTS13Q76LX8 1427 aa9.61□□□□□ -0.87
UPF3B-205ENST00000636792 ADGRB1O14514 1584 aa9.61□□□□□ -0.87
UPF3B-205ENST00000636792 CPS1P31327 1500 aa9.61□□□□□ -0.87
UPF3B-205ENST00000636792 DLC1Q96QB1 1528 aa9.61□□□□□ -0.87
UPF3B-205ENST00000636792 NKTRP30414 1462 aaKnown RBP9.6□□□□□ -0.87
UPF3B-205ENST00000636792 TECPR2O15040 1411 aa9.6□□□□□ -0.87
UPF3B-205ENST00000636792 PBX2P40425 430 aa9.6□□□□□ -0.87
UPF3B-205ENST00000636792 RGL3Q3MIN7 710 aa9.6□□□□□ -0.87
UPF3B-205ENST00000636792 TXNDC2Q86VQ3 553 aa9.6□□□□□ -0.87
UPF3B-205ENST00000636792 PTCH1Q13635 1447 aa9.59□□□□□ -0.87
UPF3B-205ENST00000636792 KHSRPQ92945 711 aaKnown RBP eCLIP9.59□□□□□ -0.87
UPF3B-205ENST00000636792 TBX22Q9Y458 520 aa9.59□□□□□ -0.87
UPF3B-205ENST00000636792 ASXL1Q8IXJ9 1541 aa9.59□□□□□ -0.87
UPF3B-205ENST00000636792 ARHGEF28Q8N1W1 1705 aaKnown RBP9.59□□□□□ -0.87
UPF3B-205ENST00000636792 LTKP29376 864 aa9.58□□□□□ -0.88
UPF3B-205ENST00000636792 ADGRF5Q8IZF2 1346 aa9.57□□□□□ -0.88
UPF3B-205ENST00000636792 C14orf93Q9H972 538 aaKnown RBP9.57□□□□□ -0.88
UPF3B-205ENST00000636792 EIF3AQ14152 1382 aaKnown RBP9.57□□□□□ -0.88
UPF3B-205ENST00000636792 FAM135BQ49AJ0 1406 aa9.56□□□□□ -0.88
UPF3B-205ENST00000636792 NCOA3Q9Y6Q9 1424 aa9.56□□□□□ -0.88
UPF3B-205ENST00000636792 ROCK2O75116 1388 aaKnown RBP9.55□□□□□ -0.88
UPF3B-205ENST00000636792 LRPPRCP42704 1394 aaKnown RBP9.55□□□□□ -0.88
UPF3B-205ENST00000636792 ABCC11Q96J66 1382 aa9.55□□□□□ -0.88
UPF3B-205ENST00000636792 FBXO22Q8NEZ5 403 aa9.55□□□□□ -0.88
UPF3B-205ENST00000636792 BCL11BQ9C0K0 894 aaPredicted RBP9.55□□□□□ -0.88
UPF3B-205ENST00000636792 YTHDC2Q9H6S0 1430 aaKnown RBP9.55□□□□□ -0.88
UPF3B-205ENST00000636792 ADGRB2O60241 1585 aa9.54□□□□□ -0.88
UPF3B-205ENST00000636792 SBNO2Q9Y2G9 1366 aa9.54□□□□□ -0.88
UPF3B-205ENST00000636792 SLC24A1O60721 1099 aa9.54□□□□□ -0.88
UPF3B-205ENST00000636792 HSPA2P54652 639 aa9.54□□□□□ -0.88
UPF3B-205ENST00000636792 IQSEC2Q5JU85 1478 aa9.53□□□□□ -0.88
UPF3B-205ENST00000636792 QRICH2Q9H0J4 1663 aa9.53□□□□□ -0.88
UPF3B-205ENST00000636792 NUDT7P0C024 238 aa9.53□□□□□ -0.88
UPF3B-205ENST00000636792 SIRT1Q96EB6 747 aa9.53□□□□□ -0.88
UPF3B-205ENST00000636792 KDM2AQ9Y2K7 1162 aa9.53□□□□□ -0.88
UPF3B-205ENST00000636792 STK24Q9Y6E0 443 aa9.53□□□□□ -0.88
UPF3B-205ENST00000636792 NCKAP5LQ9HCH0 1330 aa9.53□□□□□ -0.88
UPF3B-205ENST00000636792 STRCP1A6NGW2 1772 aa9.52□□□□□ -0.89
UPF3B-205ENST00000636792 METP08581 1390 aa9.51□□□□□ -0.89
UPF3B-205ENST00000636792 CDC42BPGQ6DT37 1551 aa9.51□□□□□ -0.89
UPF3B-205ENST00000636792 DCCP43146 1447 aa9.51□□□□□ -0.89
UPF3B-205ENST00000636792 C2orf72A6NCS6 295 aa9.51□□□□□ -0.89
UPF3B-205ENST00000636792 CFAP70Q5T0N1 1121 aa9.51□□□□□ -0.89
UPF3B-205ENST00000636792 HCSTQ9UBK5 93 aa9.51□□□□□ -0.89
UPF3B-205ENST00000636792 PTPRUQ92729 1446 aa9.5□□□□□ -0.89
UPF3B-205ENST00000636792 KIF3CO14782 793 aa9.5□□□□□ -0.89
UPF3B-205ENST00000636792 KCNA6P17658 529 aa9.5□□□□□ -0.89
UPF3B-205ENST00000636792 NBPF8Q3BBV2 869 aa9.5□□□□□ -0.89
UPF3B-205ENST00000636792 BCANQ96GW7 911 aa9.5□□□□□ -0.89
UPF3B-205ENST00000636792 XIRP1Q702N8 1843 aaKnown RBP9.49□□□□□ -0.89
UPF3B-205ENST00000636792 LTBP4Q8N2S1 1624 aa9.49□□□□□ -0.89
UPF3B-205ENST00000636792 NALCNQ8IZF0 1738 aa9.49□□□□□ -0.89
UPF3B-205ENST00000636792 SLC34A2O95436 690 aa9.49□□□□□ -0.89
UPF3B-205ENST00000636792 NUTM2DQ5VT03 806 aaPredicted RBP9.49□□□□□ -0.89
UPF3B-205ENST00000636792 CARD11Q9BXL7 1154 aa9.49□□□□□ -0.89
UPF3B-205ENST00000636792 PLA2G2EQ9NZK7 142 aa9.49□□□□□ -0.89
UPF3B-205ENST00000636792 LHX6Q9UPM6 363 aa9.49□□□□□ -0.89
UPF3B-205ENST00000636792 USP47Q96K76 1375 aa9.49□□□□□ -0.89
UPF3B-205ENST00000636792 ITSN1Q15811 1721 aa9.48□□□□□ -0.89
UPF3B-205ENST00000636792 TMC2Q8TDI7 906 aa9.48□□□□□ -0.89
UPF3B-205ENST00000636792 SLC26A8Q96RN1 970 aa9.48□□□□□ -0.89
UPF3B-205ENST00000636792 MFRPQ9BY79 579 aa9.48□□□□□ -0.89
UPF3B-205ENST00000636792 PCDHGA4Q9Y5G9 962 aa9.48□□□□□ -0.89
UPF3B-205ENST00000636792 ADGRL3Q9HAR2 1447 aa9.48□□□□□ -0.89
UPF3B-205ENST00000636792 AXIN2Q9Y2T1 843 aa9.47□□□□□ -0.89
UPF3B-205ENST00000636792 LRRC7Q96NW7 1537 aa9.46□□□□□ -0.89
UPF3B-205ENST00000636792 FMN2Q9NZ56 1722 aa9.46□□□□□ -0.89
UPF3B-205ENST00000636792 PSDA5PKW4 1024 aaPredicted RBP9.46□□□□□ -0.9
UPF3B-205ENST00000636792 STK25O00506 426 aa9.46□□□□□ -0.9
UPF3B-205ENST00000636792 AMOTL2Q9Y2J4 779 aa9.46□□□□□ -0.9
UPF3B-205ENST00000636792 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms