RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 MAN1A2O60476 641 aa9.45□□□□□ -0.9
CLN5-212ENST00000636602 EVA1BQ9NVM1 165 aa9.45□□□□□ -0.9
CLN5-212ENST00000636602 RNF225M0QZC1 329 aaPredicted RBP9.44□□□□□ -0.9
CLN5-212ENST00000636602 ZNF511Q8NB15 262 aa9.44□□□□□ -0.9
CLN5-212ENST00000636602 MAP2K5Q13163 448 aa9.43□□□□□ -0.9
CLN5-212ENST00000636602 PTPRNQ16849 979 aa9.43□□□□□ -0.9
CLN5-212ENST00000636602 ADAMTS8Q9UP79 889 aa9.43□□□□□ -0.9
CLN5-212ENST00000636602 KCNH2Q12809 1159 aa9.42□□□□□ -0.9
CLN5-212ENST00000636602 C6orf229H3BNL8 230 aa9.41□□□□□ -0.9
CLN5-212ENST00000636602 KRT76Q01546 638 aa9.41□□□□□ -0.9
CLN5-212ENST00000636602 C6orf118Q5T5N4 469 aa9.41□□□□□ -0.9
CLN5-212ENST00000636602 PCDHGC3Q9UN70 934 aa9.41□□□□□ -0.9
CLN5-212ENST00000636602 FDX1P10109 184 aa9.4□□□□□ -0.9
CLN5-212ENST00000636602 NUTM1Q86Y26 1132 aa9.4□□□□□ -0.9
CLN5-212ENST00000636602 IRF6O14896 467 aa9.39□□□□□ -0.91
CLN5-212ENST00000636602 ZIC2O95409 532 aaPredicted RBP9.39□□□□□ -0.91
CLN5-212ENST00000636602 ZFAND3Q9H8U3 227 aa9.39□□□□□ -0.91
CLN5-212ENST00000636602 GPR161Q8N6U8 529 aaKnown RBP9.38□□□□□ -0.91
CLN5-212ENST00000636602 CNTNAP3BQ96NU0 1288 aa9.38□□□□□ -0.91
CLN5-212ENST00000636602 CNTNAP3Q9BZ76 1288 aa9.38□□□□□ -0.91
CLN5-212ENST00000636602 FAM174AQ8TBP5 190 aa9.37□□□□□ -0.91
CLN5-212ENST00000636602 ITPKCQ96DU7 683 aa9.37□□□□□ -0.91
CLN5-212ENST00000636602 CDK15Q96Q40 435 aa9.37□□□□□ -0.91
CLN5-212ENST00000636602 FAM217BQ9NTX9 383 aaPredicted RBP9.37□□□□□ -0.91
CLN5-212ENST00000636602 GPCPD1Q9NPB8 672 aa9.36□□□□□ -0.91
CLN5-212ENST00000636602 IGHA1P01876 353 aa9.35□□□□□ -0.91
CLN5-212ENST00000636602 BMP2P12643 396 aa9.35□□□□□ -0.91
CLN5-212ENST00000636602 GPAT2Q6NUI2 795 aa9.35□□□□□ -0.91
CLN5-212ENST00000636602 DNMT3AQ9Y6K1 912 aaPredicted RBP9.35□□□□□ -0.91
CLN5-212ENST00000636602 SOS2Q07890 1332 aaPredicted RBP9.34□□□□□ -0.91
CLN5-212ENST00000636602 UPP2O95045 317 aa9.34□□□□□ -0.91
CLN5-212ENST00000636602 LINC00528Q8N1L1 170 aa9.34□□□□□ -0.91
CLN5-212ENST00000636602 DNMT3LQ9UJW3 386 aa9.34□□□□□ -0.91
CLN5-212ENST00000636602 NR3C2P08235 984 aa9.33□□□□□ -0.92
CLN5-212ENST00000636602 CLCN1P35523 988 aa9.33□□□□□ -0.92
CLN5-212ENST00000636602 NR5A1Q13285 461 aa9.33□□□□□ -0.92
CLN5-212ENST00000636602 ARID5BQ14865 1188 aa9.33□□□□□ -0.92
CLN5-212ENST00000636602 ZNF385CQ66K41 422 aaPredicted RBP9.33□□□□□ -0.92
CLN5-212ENST00000636602 PRR7Q8TB68 274 aa9.33□□□□□ -0.92
CLN5-212ENST00000636602 MINK1Q8N4C8 1332 aaPredicted RBP9.32□□□□□ -0.92
CLN5-212ENST00000636602 DESI1Q6ICB0 168 aa9.32□□□□□ -0.92
CLN5-212ENST00000636602 IRS1P35568 1242 aa9.31□□□□□ -0.92
CLN5-212ENST00000636602 SVOPQ8N4V2 548 aa9.31□□□□□ -0.92
CLN5-212ENST00000636602 MEIOBQ8N635 442 aa9.31□□□□□ -0.92
CLN5-212ENST00000636602 COL25A1Q9BXS0 654 aaPredicted RBP9.31□□□□□ -0.92
CLN5-212ENST00000636602 GRM5P41594 1212 aa9.3□□□□□ -0.92
CLN5-212ENST00000636602 FOXJ1Q92949 421 aa9.3□□□□□ -0.92
CLN5-212ENST00000636602 CCDC102AQ96A19 550 aa9.29□□□□□ -0.92
CLN5-212ENST00000636602 SPTLC1O15269 473 aa9.28□□□□□ -0.92
CLN5-212ENST00000636602 NDUFV2P19404 249 aa9.28□□□□□ -0.92
CLN5-212ENST00000636602 CTHP32929 405 aa9.28□□□□□ -0.92
CLN5-212ENST00000636602 FOXK2Q01167 660 aa9.28□□□□□ -0.92
CLN5-212ENST00000636602 XP32Q5T750 250 aa9.28□□□□□ -0.92
CLN5-212ENST00000636602 SPIRE2Q8WWL2 714 aa9.28□□□□□ -0.92
CLN5-212ENST00000636602 NANOS1Q8WY41 292 aaKnown RBP9.28□□□□□ -0.92
CLN5-212ENST00000636602 SPDYE5A6NIY4 337 aa9.27□□□□□ -0.93
CLN5-212ENST00000636602 ARHGEF15O94989 841 aa9.27□□□□□ -0.93
CLN5-212ENST00000636602 MTMR2Q13614 643 aa9.27□□□□□ -0.93
CLN5-212ENST00000636602 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.27□□□□□ -0.93
CLN5-212ENST00000636602 RNFT1Q5M7Z0 435 aa9.27□□□□□ -0.93
CLN5-212ENST00000636602 KANK3Q6NY19 840 aa9.27□□□□□ -0.93
CLN5-212ENST00000636602 PTSQ03393 145 aa9.26□□□□□ -0.93
CLN5-212ENST00000636602 WHAMMQ8TF30 809 aa9.26□□□□□ -0.93
CLN5-212ENST00000636602 MOXD2PA6NHM9 499 aa9.25□□□□□ -0.93
CLN5-212ENST00000636602 SLURP2P0DP57 97 aa9.25□□□□□ -0.93
CLN5-212ENST00000636602 LYPD8Q6UX82 237 aa9.25□□□□□ -0.93
CLN5-212ENST00000636602 TSEN34Q9BSV6 310 aaKnown RBP9.25□□□□□ -0.93
CLN5-212ENST00000636602 C4orf48Q5BLP8 95 aa9.24□□□□□ -0.93
CLN5-212ENST00000636602 KRI1Q8N9T8 703 aaKnown RBP9.24□□□□□ -0.93
CLN5-212ENST00000636602 TTLL8A6PVC2 850 aa9.23□□□□□ -0.93
CLN5-212ENST00000636602 MARSP56192 900 aaKnown RBP9.23□□□□□ -0.93
CLN5-212ENST00000636602 AGERQ15109 404 aa9.22□□□□□ -0.93
CLN5-212ENST00000636602 CCDC155Q8N6L0 562 aa9.22□□□□□ -0.93
CLN5-212ENST00000636602 SSTR3P32745 418 aaPredicted RBP9.21□□□□□ -0.94
CLN5-212ENST00000636602 BPHLQ86WA6 291 aaPredicted RBP9.21□□□□□ -0.94
CLN5-212ENST00000636602 SCARF2Q96GP6 870 aaPredicted RBP9.21□□□□□ -0.94
CLN5-212ENST00000636602 MAP10Q9P2G4 905 aa9.21□□□□□ -0.94
CLN5-212ENST00000636602 F12P00748 615 aaPredicted RBP9.2□□□□□ -0.94
CLN5-212ENST00000636602 FIGNL2A6NMB9 653 aa9.19□□□□□ -0.94
CLN5-212ENST00000636602 FSHRP23945 695 aa9.18□□□□□ -0.94
CLN5-212ENST00000636602 VWA5B2Q8N398 1253 aa9.18□□□□□ -0.94
CLN5-212ENST00000636602 SLC35F4A4IF30 521 aa9.17□□□□□ -0.94
CLN5-212ENST00000636602 ADAM23O75077 832 aa9.17□□□□□ -0.94
CLN5-212ENST00000636602 EMILIN1Q9Y6C2 1016 aa9.17□□□□□ -0.94
CLN5-212ENST00000636602 CFAP99D6REC4 459 aa9.16□□□□□ -0.94
CLN5-212ENST00000636602 SV2AQ7L0J3 742 aa9.16□□□□□ -0.94
CLN5-212ENST00000636602 C1QTNF2Q9BXJ5 285 aa9.16□□□□□ -0.94
CLN5-212ENST00000636602 MAP4K5Q9Y4K4 846 aa9.16□□□□□ -0.94
CLN5-212ENST00000636602 ITGA6P23229 1130 aa9.15□□□□□ -0.94
CLN5-212ENST00000636602 CDC14CA4D256 554 aa9.14□□□□□ -0.95
CLN5-212ENST00000636602 MSTNO14793 375 aa9.14□□□□□ -0.95
CLN5-212ENST00000636602 GJA5P36382 358 aa9.14□□□□□ -0.95
CLN5-212ENST00000636602 LYPD4Q6UWN0 246 aa9.14□□□□□ -0.95
CLN5-212ENST00000636602 VASH1Q7L8A9 365 aaPredicted RBP9.14□□□□□ -0.95
CLN5-212ENST00000636602 CCDC116Q8IYX3 515 aa9.14□□□□□ -0.95
CLN5-212ENST00000636602 SPINT1O43278 529 aa9.13□□□□□ -0.95
CLN5-212ENST00000636602 SH3RF1Q7Z6J0 888 aa9.13□□□□□ -0.95
CLN5-212ENST00000636602 ADAMTS2O95450 1211 aa9.12□□□□□ -0.95
CLN5-212ENST00000636602 PLA2G4EQ3MJ16 856 aa9.12□□□□□ -0.95
CLN5-212ENST00000636602 TRMT44Q8IYL2 757 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms