RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 CCNB3Q8WWL7 1395 aa2.88□□□□□ -1.95
SYNGAP1-215ENST00000636443 PIK3R4Q99570 1358 aa2.88□□□□□ -1.95
SYNGAP1-215ENST00000636443 ABCA3Q99758 1704 aa2.88□□□□□ -1.95
SYNGAP1-215ENST00000636443 FOXO3O43524 673 aa2.88□□□□□ -1.95
SYNGAP1-215ENST00000636443 IDI1Q13907 227 aa2.88□□□□□ -1.95
SYNGAP1-215ENST00000636443 SMC1BQ8NDV3 1235 aa2.88□□□□□ -1.95
SYNGAP1-215ENST00000636443 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.88□□□□□ -1.95
SYNGAP1-215ENST00000636443 SGIP1Q9BQI5 828 aa2.88□□□□□ -1.95
SYNGAP1-215ENST00000636443 ZNF219Q9P2Y4 722 aaPredicted RBP2.88□□□□□ -1.95
SYNGAP1-215ENST00000636443 CCDC18Q5T9S5 1454 aa2.88□□□□□ -1.95
SYNGAP1-215ENST00000636443 PXDNQ92626 1479 aa2.88□□□□□ -1.95
SYNGAP1-215ENST00000636443 PRXQ9BXM0 1461 aa2.88□□□□□ -1.95
SYNGAP1-215ENST00000636443 SPATA31A5Q5VU36 1347 aa2.88□□□□□ -1.95
SYNGAP1-215ENST00000636443 SPATA31A7Q8IWB4 1347 aa2.88□□□□□ -1.95
SYNGAP1-215ENST00000636443 XRN1Q8IZH2 1706 aaKnown RBP2.88□□□□□ -1.95
SYNGAP1-215ENST00000636443 PDE4DIPQ5VU43 2346 aa2.87□□□□□ -1.95
SYNGAP1-215ENST00000636443 COL14A1Q05707 1796 aaKnown RBP2.87□□□□□ -1.95
SYNGAP1-215ENST00000636443 PRAG1Q86YV5 1406 aa2.87□□□□□ -1.95
SYNGAP1-215ENST00000636443 EIF2AK4Q9P2K8 1649 aaKnown RBP2.87□□□□□ -1.95
SYNGAP1-215ENST00000636443 MSH5O43196 834 aa2.87□□□□□ -1.95
SYNGAP1-215ENST00000636443 STRN4Q9NRL3 753 aa2.87□□□□□ -1.95
SYNGAP1-215ENST00000636443 TNRC18O15417 2968 aaPredicted RBP2.87□□□□□ -1.95
SYNGAP1-215ENST00000636443 MTUS2Q5JR59 1369 aa2.87□□□□□ -1.95
SYNGAP1-215ENST00000636443 ADAMTS13Q76LX8 1427 aa2.86□□□□□ -1.95
SYNGAP1-215ENST00000636443 PTPRUQ92729 1446 aa2.86□□□□□ -1.95
SYNGAP1-215ENST00000636443 CCDC141Q6ZP82 1450 aa2.86□□□□□ -1.95
SYNGAP1-215ENST00000636443 NUTM2FA1L443 756 aa2.86□□□□□ -1.95
SYNGAP1-215ENST00000636443 PLSCR1O15162 318 aa2.86□□□□□ -1.95
SYNGAP1-215ENST00000636443 SOX10P56693 466 aa2.86□□□□□ -1.95
SYNGAP1-215ENST00000636443 HABP4Q5JVS0 413 aaKnown RBP2.86□□□□□ -1.95
SYNGAP1-215ENST00000636443 KDM2BQ8NHM5 1336 aa2.86□□□□□ -1.95
SYNGAP1-215ENST00000636443 ZNF644Q9H582 1327 aaPredicted RBP2.86□□□□□ -1.95
SYNGAP1-215ENST00000636443 KANK1Q14678 1352 aa2.86□□□□□ -1.95
SYNGAP1-215ENST00000636443 TECPR2O15040 1411 aa2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 ZFYVE9O95405 1425 aa2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 PCNTO95613 3336 aa2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 LMTK2Q8IWU2 1503 aa2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 C11orf95C9JLR9 678 aaPredicted RBP2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 TSPY4P0CV99 314 aa2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 TSPY10P0CW01 314 aa2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 HSPA8P11142 646 aaKnown RBP2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 EVA1CP58658 441 aa2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 TXNRD1Q16881 649 aa2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 NBPF15Q8N660 670 aa2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 BEGAINQ9BUH8 593 aa2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 RRAGCQ9HB90 399 aa2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 SPATA31A3Q5VYP0 1347 aa2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 TNRC6CQ9HCJ0 1690 aaKnown RBP2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 OVOS2A0A0G2JMS6 1433 aa2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 OVOS2A0A0J9YW53 1432 aa2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 CCDC144AA2RUR9 1427 aa2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 ARHGAP31Q2M1Z3 1444 aa2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 TNS3Q68CZ2 1445 aa2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 OVOS2Q6IE36 1432 aa2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 RRBP1Q9P2E9 1410 aaKnown RBP2.85□□□□□ -1.95
SYNGAP1-215ENST00000636443 SBF2Q86WG5 1849 aa2.84□□□□□ -1.95
SYNGAP1-215ENST00000636443 KCPQ6ZWJ8 1503 aa2.84□□□□□ -1.95
SYNGAP1-215ENST00000636443 PSME1Q06323 249 aa2.84□□□□□ -1.95
SYNGAP1-215ENST00000636443 KRT28Q7Z3Y7 464 aa2.84□□□□□ -1.95
SYNGAP1-215ENST00000636443 MCOLN1Q9GZU1 580 aa2.84□□□□□ -1.95
SYNGAP1-215ENST00000636443 PRDM11Q9NQV5 511 aa2.84□□□□□ -1.95
SYNGAP1-215ENST00000636443 KIF1AQ12756 1690 aa2.84□□□□□ -1.95
SYNGAP1-215ENST00000636443 SPATA31A1Q5TZJ5 1347 aa2.84□□□□□ -1.96
SYNGAP1-215ENST00000636443 GOLGB1Q14789 3259 aaKnown RBP2.84□□□□□ -1.96
SYNGAP1-215ENST00000636443 PKD1L3Q7Z443 1732 aa2.83□□□□□ -1.96
SYNGAP1-215ENST00000636443 AKAP12Q02952 1782 aa2.83□□□□□ -1.96
SYNGAP1-215ENST00000636443 DGKZQ13574 1117 aa2.83□□□□□ -1.96
SYNGAP1-215ENST00000636443 MSL1Q68DK7 614 aa2.83□□□□□ -1.96
SYNGAP1-215ENST00000636443 ARHGAP27Q6ZUM4 889 aa2.83□□□□□ -1.96
SYNGAP1-215ENST00000636443 SLC16A10Q8TF71 515 aa2.83□□□□□ -1.96
SYNGAP1-215ENST00000636443 SLC52A1Q9NWF4 448 aa2.83□□□□□ -1.96
SYNGAP1-215ENST00000636443 IGSF1Q8N6C5 1336 aa2.83□□□□□ -1.96
SYNGAP1-215ENST00000636443 ARHGEF10O15013 1369 aa2.83□□□□□ -1.96
SYNGAP1-215ENST00000636443 PLEKHG2Q9H7P9 1386 aa2.83□□□□□ -1.96
SYNGAP1-215ENST00000636443 KIF15Q9NS87 1388 aa2.83□□□□□ -1.96
SYNGAP1-215ENST00000636443 MBD5Q9P267 1494 aa2.83□□□□□ -1.96
SYNGAP1-215ENST00000636443 ARHGEF5Q12774 1597 aa2.83□□□□□ -1.96
SYNGAP1-215ENST00000636443 CICQ96RK0 1608 aaPredicted RBP2.82□□□□□ -1.96
SYNGAP1-215ENST00000636443 PARP4Q9UKK3 1724 aaKnown RBP2.82□□□□□ -1.96
SYNGAP1-215ENST00000636443 FXR1P51114 621 aaKnown RBP eCLIP2.82□□□□□ -1.96
SYNGAP1-215ENST00000636443 MAP2K1Q02750 393 aaPredicted RBP2.82□□□□□ -1.96
SYNGAP1-215ENST00000636443 GRM1Q13255 1194 aa2.82□□□□□ -1.96
SYNGAP1-215ENST00000636443 PAXIP1Q6ZW49 1069 aaPredicted RBP2.82□□□□□ -1.96
SYNGAP1-215ENST00000636443 PTF1AQ7RTS3 328 aa2.82□□□□□ -1.96
SYNGAP1-215ENST00000636443 PROM2Q8N271 834 aa2.82□□□□□ -1.96
SYNGAP1-215ENST00000636443 CREBZFQ9NS37 354 aa2.82□□□□□ -1.96
SYNGAP1-215ENST00000636443 WBP1LQ9NX94 342 aa2.82□□□□□ -1.96
SYNGAP1-215ENST00000636443 TFCP2L1Q9NZI6 479 aa2.82□□□□□ -1.96
SYNGAP1-215ENST00000636443 CNTNAP1P78357 1384 aa2.82□□□□□ -1.96
SYNGAP1-215ENST00000636443 DUOX2Q9NRD8 1548 aa2.82□□□□□ -1.96
SYNGAP1-215ENST00000636443 PIK3C2AO00443 1686 aa2.82□□□□□ -1.96
SYNGAP1-215ENST00000636443 VEGFBP49765 207 aa2.81□□□□□ -1.96
SYNGAP1-215ENST00000636443 MNX1P50219 401 aaPredicted RBP2.81□□□□□ -1.96
SYNGAP1-215ENST00000636443 CHRNA2Q15822 529 aa2.81□□□□□ -1.96
SYNGAP1-215ENST00000636443 ZNF827Q17R98 1081 aa2.81□□□□□ -1.96
SYNGAP1-215ENST00000636443 ZNF326Q5BKZ1 582 aaKnown RBP2.81□□□□□ -1.96
SYNGAP1-215ENST00000636443 C9orf131Q5VYM1 1079 aa2.81□□□□□ -1.96
SYNGAP1-215ENST00000636443 BARGINQ6ZT62 677 aa2.81□□□□□ -1.96
SYNGAP1-215ENST00000636443 TCP11L2Q8N4U5 519 aa2.81□□□□□ -1.96
SYNGAP1-215ENST00000636443 FAM122AQ96E09 287 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms