RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 TULP4Q9NRJ4 1543 aa26.49■■□□□ 1.83
CLN6-214ENST00000636314 NEUROD1Q13562 356 aa26.49■■□□□ 1.83
CLN6-214ENST00000636314 L3MBTL2Q969R5 705 aa26.49■■□□□ 1.83
CLN6-214ENST00000636314 COL14A1Q05707 1796 aaKnown RBP26.48■■□□□ 1.83
CLN6-214ENST00000636314 ONECUT3O60422 494 aaPredicted RBP26.48■■□□□ 1.83
CLN6-214ENST00000636314 GPRASP1Q5JY77 1395 aa26.46■■□□□ 1.83
CLN6-214ENST00000636314 NBPF1Q3BBV0 1214 aa26.45■■□□□ 1.82
CLN6-214ENST00000636314 BTG4Q9NY30 223 aa26.45■■□□□ 1.82
CLN6-214ENST00000636314 TRPM1Q7Z4N2 1603 aa26.44■■□□□ 1.82
CLN6-214ENST00000636314 WASLO00401 505 aaPredicted RBP26.44■■□□□ 1.82
CLN6-214ENST00000636314 FAM98CQ17RN3 349 aaKnown RBP26.44■■□□□ 1.82
CLN6-214ENST00000636314 ITSN1Q15811 1721 aa26.44■■□□□ 1.82
CLN6-214ENST00000636314 CRYBG1Q9Y4K1 1723 aa26.42■■□□□ 1.82
CLN6-214ENST00000636314 RGPD1P0DJD0 1748 aa26.42■■□□□ 1.82
CLN6-214ENST00000636314 LRP5O75197 1615 aa26.41■■□□□ 1.82
CLN6-214ENST00000636314 BAG6P46379 1132 aa26.41■■□□□ 1.82
CLN6-214ENST00000636314 PRR36Q9H6K5 1346 aa26.4■■□□□ 1.82
CLN6-214ENST00000636314 ATP7BP35670 1465 aa26.38■■□□□ 1.81
CLN6-214ENST00000636314 PAK3O75914 559 aaPredicted RBP26.38■■□□□ 1.81
CLN6-214ENST00000636314 NGDNQ8NEJ9 315 aaKnown RBP26.38■■□□□ 1.81
CLN6-214ENST00000636314 QRICH2Q9H0J4 1663 aa26.38■■□□□ 1.81
CLN6-214ENST00000636314 PSDA5PKW4 1024 aaPredicted RBP26.36■■□□□ 1.81
CLN6-214ENST00000636314 CENPJQ9HC77 1338 aaPredicted RBP26.35■■□□□ 1.81
CLN6-214ENST00000636314 TOPAZ1Q8N9V7 1692 aa26.34■■□□□ 1.81
CLN6-214ENST00000636314 FAM182BQ5T319 152 aa26.33■■□□□ 1.81
CLN6-214ENST00000636314 THSD7AQ9UPZ6 1657 aa26.33■■□□□ 1.81
CLN6-214ENST00000636314 SPATA31A5Q5VU36 1347 aa26.33■■□□□ 1.81
CLN6-214ENST00000636314 SPATA31A7Q8IWB4 1347 aa26.33■■□□□ 1.81
CLN6-214ENST00000636314 ROCK2O75116 1388 aaKnown RBP26.33■■□□□ 1.8
CLN6-214ENST00000636314 TNS1Q9HBL0 1735 aaKnown RBP26.32■■□□□ 1.8
CLN6-214ENST00000636314 CDK19Q9BWU1 502 aa26.32■■□□□ 1.8
CLN6-214ENST00000636314 PRDM11Q9NQV5 511 aa26.32■■□□□ 1.8
CLN6-214ENST00000636314 TONSLQ96HA7 1378 aa26.32■■□□□ 1.8
CLN6-214ENST00000636314 PHRF1Q9P1Y6 1649 aaKnown RBP26.32■■□□□ 1.8
CLN6-214ENST00000636314 NUDT16Q96DE0 195 aaKnown RBP26.31■■□□□ 1.8
CLN6-214ENST00000636314 EN1Q05925 392 aaPredicted RBP26.3■■□□□ 1.8
CLN6-214ENST00000636314 KIAA0232Q92628 1395 aa26.26■■□□□ 1.79
CLN6-214ENST00000636314 CHRNA2Q15822 529 aa26.25■■□□□ 1.79
CLN6-214ENST00000636314 SRPK2P78362 688 aaKnown RBP26.24■■□□□ 1.79
CLN6-214ENST00000636314 NBPF8Q3BBV2 869 aa26.24■■□□□ 1.79
CLN6-214ENST00000636314 STRN4Q9NRL3 753 aa26.24■■□□□ 1.79
CLN6-214ENST00000636314 CCDC61Q9Y6R9 512 aa26.24■■□□□ 1.79
CLN6-214ENST00000636314 NUTM2GQ5VZR2 741 aa26.23■■□□□ 1.79
CLN6-214ENST00000636314 SPATA31A1Q5TZJ5 1347 aa26.22■■□□□ 1.79
CLN6-214ENST00000636314 ZC3H6P61129 1189 aaKnown RBP26.21■■□□□ 1.79
CLN6-214ENST00000636314 R3HDM1Q15032 1099 aaKnown RBP26.21■■□□□ 1.79
CLN6-214ENST00000636314 DISP2A7MBM2 1401 aa26.21■■□□□ 1.79
CLN6-214ENST00000636314 POLR3AO14802 1390 aaPredicted RBP26.2■■□□□ 1.79
CLN6-214ENST00000636314 EZH2Q15910 746 aaKnown RBP26.19■■□□□ 1.78
CLN6-214ENST00000636314 PPIP5K1Q6PFW1 1433 aa26.19■■□□□ 1.78
CLN6-214ENST00000636314 ACEP12821 1306 aa26.18■■□□□ 1.78
CLN6-214ENST00000636314 CABP2Q9NPB3 220 aa26.18■■□□□ 1.78
CLN6-214ENST00000636314 USP35Q9P2H5 1018 aa26.18■■□□□ 1.78
CLN6-214ENST00000636314 TRIM37O94972 964 aa26.17■■□□□ 1.78
CLN6-214ENST00000636314 PLEKHG3A1L390 1219 aa26.16■■□□□ 1.78
CLN6-214ENST00000636314 EVA1CP58658 441 aa26.16■■□□□ 1.78
CLN6-214ENST00000636314 FAM196AQ6ZSG2 479 aa26.16■■□□□ 1.78
CLN6-214ENST00000636314 NRKQ7Z2Y5 1582 aa26.16■■□□□ 1.78
CLN6-214ENST00000636314 EVC2Q86UK5 1308 aa26.15■■□□□ 1.78
CLN6-214ENST00000636314 CARD11Q9BXL7 1154 aa26.15■■□□□ 1.78
CLN6-214ENST00000636314 SSH2Q76I76 1423 aa26.13■■□□□ 1.77
CLN6-214ENST00000636314 APBA3O96018 575 aa26.12■■□□□ 1.77
CLN6-214ENST00000636314 RREB1Q92766 1687 aa26.12■■□□□ 1.77
CLN6-214ENST00000636314 PDE3BQ13370 1112 aa26.11■■□□□ 1.77
CLN6-214ENST00000636314 ABTB2Q8N961 1025 aa26.11■■□□□ 1.77
CLN6-214ENST00000636314 CAMKK2Q96RR4 588 aa26.11■■□□□ 1.77
CLN6-214ENST00000636314 LMO7Q8WWI1 1683 aa26.1■■□□□ 1.77
CLN6-214ENST00000636314 CAMTA1Q9Y6Y1 1673 aa26.1■■□□□ 1.77
CLN6-214ENST00000636314 NUP188Q5SRE5 1749 aa26.09■■□□□ 1.77
CLN6-214ENST00000636314 SBNO2Q9Y2G9 1366 aa26.08■■□□□ 1.77
CLN6-214ENST00000636314 LARP1Q6PKG0 1096 aaKnown RBP26.08■■□□□ 1.77
CLN6-214ENST00000636314 BARGINQ6ZT62 677 aa26.08■■□□□ 1.77
CLN6-214ENST00000636314 PARD3Q8TEW0 1356 aa26.07■■□□□ 1.76
CLN6-214ENST00000636314 CABP1Q9NZU7 370 aa26.07■■□□□ 1.76
CLN6-214ENST00000636314 USP6P35125 1406 aa26.05■■□□□ 1.76
CLN6-214ENST00000636314 TCP11L2Q8N4U5 519 aa26.05■■□□□ 1.76
CLN6-214ENST00000636314 PCGF6Q9BYE7 350 aa26.05■■□□□ 1.76
CLN6-214ENST00000636314 BRD4O60885 1362 aaPredicted RBP26.05■■□□□ 1.76
CLN6-214ENST00000636314 CPDO75976 1380 aa26.05■■□□□ 1.76
CLN6-214ENST00000636314 PARP4Q9UKK3 1724 aaKnown RBP26.04■■□□□ 1.76
CLN6-214ENST00000636314 USP19O94966 1318 aa26.04■■□□□ 1.76
CLN6-214ENST00000636314 AKAP12Q02952 1782 aa26.03■■□□□ 1.76
CLN6-214ENST00000636314 NLRP13Q86W25 1043 aa26.02■■□□□ 1.76
CLN6-214ENST00000636314 ZBTB7CA1YPR0 619 aa26.01■■□□□ 1.75
CLN6-214ENST00000636314 GCP02774 474 aa26■■□□□ 1.75
CLN6-214ENST00000636314 COL5A2P05997 1499 aaPredicted RBP25.99■■□□□ 1.75
CLN6-214ENST00000636314 CLSPNQ9HAW4 1339 aa25.99■■□□□ 1.75
CLN6-214ENST00000636314 NBPF14Q5TI25 921 aa25.99■■□□□ 1.75
CLN6-214ENST00000636314 THRAP3Q9Y2W1 955 aaKnown RBP25.99■■□□□ 1.75
CLN6-214ENST00000636314 PIK3C2AO00443 1686 aa25.97■■□□□ 1.75
CLN6-214ENST00000636314 SBF2Q86WG5 1849 aa25.96■■□□□ 1.75
CLN6-214ENST00000636314 MON2Q7Z3U7 1717 aa25.95■■□□□ 1.74
CLN6-214ENST00000636314 CRB1P82279 1406 aa25.95■■□□□ 1.74
CLN6-214ENST00000636314 WNK3Q9BYP7 1800 aa25.93■■□□□ 1.74
CLN6-214ENST00000636314 LRRC37A3O60309 1634 aa25.93■■□□□ 1.74
CLN6-214ENST00000636314 ZNF692Q9BU19 519 aaPredicted RBP25.93■■□□□ 1.74
CLN6-214ENST00000636314 CPSF1Q10570 1443 aaKnown RBP25.93■■□□□ 1.74
CLN6-214ENST00000636314 PEAK1Q9H792 1746 aa25.92■■□□□ 1.74
CLN6-214ENST00000636314 NLRP6P59044 892 aa25.92■■□□□ 1.74
CLN6-214ENST00000636314 SLIT3O75094 1523 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms