RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 KIF1AQ12756 1690 aa11.82□□□□□ -0.52
CDKL5-209ENST00000635828 MON2Q7Z3U7 1717 aa11.82□□□□□ -0.52
CDKL5-209ENST00000635828 ZNF316A6NFI3 1004 aaPredicted RBP11.82□□□□□ -0.52
CDKL5-209ENST00000635828 NRKQ7Z2Y5 1582 aa11.82□□□□□ -0.52
CDKL5-209ENST00000635828 NPHP3Q7Z494 1330 aa11.82□□□□□ -0.52
CDKL5-209ENST00000635828 AHDC1Q5TGY3 1603 aaPredicted RBP11.82□□□□□ -0.52
CDKL5-209ENST00000635828 PIK3C2AO00443 1686 aa11.82□□□□□ -0.52
CDKL5-209ENST00000635828 GGNBP2Q9H3C7 697 aa11.81□□□□□ -0.52
CDKL5-209ENST00000635828 SSH2Q76I76 1423 aa11.81□□□□□ -0.52
CDKL5-209ENST00000635828 MARF1Q9Y4F3 1742 aaKnown RBP11.81□□□□□ -0.52
CDKL5-209ENST00000635828 NSD3Q9BZ95 1437 aa11.81□□□□□ -0.52
CDKL5-209ENST00000635828 NUTM2BA6NNL0 878 aaPredicted RBP11.8□□□□□ -0.52
CDKL5-209ENST00000635828 NUTM2EB1AL46 878 aaPredicted RBP11.8□□□□□ -0.52
CDKL5-209ENST00000635828 NUTM2AQ8IVF1 878 aaPredicted RBP11.8□□□□□ -0.52
CDKL5-209ENST00000635828 ANKRD36BQ8N2N9 1353 aa11.8□□□□□ -0.52
CDKL5-209ENST00000635828 TTC21BQ7Z4L5 1316 aa11.8□□□□□ -0.52
CDKL5-209ENST00000635828 ABTB2Q8N961 1025 aa11.8□□□□□ -0.52
CDKL5-209ENST00000635828 ALS2Q96Q42 1657 aa11.8□□□□□ -0.52
CDKL5-209ENST00000635828 SPATA31A3Q5VYP0 1347 aa11.8□□□□□ -0.52
CDKL5-209ENST00000635828 PER1O15534 1290 aaPredicted RBP11.79□□□□□ -0.52
CDKL5-209ENST00000635828 TNNT2P45379 298 aaPredicted RBP11.79□□□□□ -0.52
CDKL5-209ENST00000635828 MED1Q15648 1581 aaPredicted RBP11.78□□□□□ -0.52
CDKL5-209ENST00000635828 FYB1O15117 783 aa11.78□□□□□ -0.52
CDKL5-209ENST00000635828 CDCA8Q53HL2 280 aa11.78□□□□□ -0.52
CDKL5-209ENST00000635828 CC2D1BQ5T0F9 858 aaKnown RBP11.78□□□□□ -0.52
CDKL5-209ENST00000635828 HDGFL2Q7Z4V5 671 aaPredicted RBP11.78□□□□□ -0.52
CDKL5-209ENST00000635828 TERF2IPQ9NYB0 399 aa11.77□□□□□ -0.52
CDKL5-209ENST00000635828 PNPLA6Q8IY17 1366 aa11.77□□□□□ -0.52
CDKL5-209ENST00000635828 LRP6O75581 1613 aa11.77□□□□□ -0.52
CDKL5-209ENST00000635828 TNS3Q68CZ2 1445 aa11.77□□□□□ -0.52
CDKL5-209ENST00000635828 ADAMTS2O95450 1211 aa11.77□□□□□ -0.53
CDKL5-209ENST00000635828 NLRP6P59044 892 aa11.77□□□□□ -0.53
CDKL5-209ENST00000635828 PUS7Q96PZ0 661 aaKnown RBP11.77□□□□□ -0.53
CDKL5-209ENST00000635828 LRRC59Q96AG4 307 aaKnown RBP11.76□□□□□ -0.53
CDKL5-209ENST00000635828 ZC3H6P61129 1189 aaKnown RBP11.76□□□□□ -0.53
CDKL5-209ENST00000635828 ZBTB7CA1YPR0 619 aa11.75□□□□□ -0.53
CDKL5-209ENST00000635828 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
CDKL5-209ENST00000635828 CRYBG1Q9Y4K1 1723 aa11.75□□□□□ -0.53
CDKL5-209ENST00000635828 EDC4Q6P2E9 1401 aaKnown RBP11.75□□□□□ -0.53
CDKL5-209ENST00000635828 AMER1Q5JTC6 1135 aaPredicted RBP11.75□□□□□ -0.53
CDKL5-209ENST00000635828 ABCA3Q99758 1704 aa11.74□□□□□ -0.53
CDKL5-209ENST00000635828 CHRNA2Q15822 529 aa11.74□□□□□ -0.53
CDKL5-209ENST00000635828 RRS1Q15050 365 aaKnown RBP11.74□□□□□ -0.53
CDKL5-209ENST00000635828 KIF20BQ96Q89 1820 aa11.73□□□□□ -0.53
CDKL5-209ENST00000635828 SLC24A1O60721 1099 aa11.73□□□□□ -0.53
CDKL5-209ENST00000635828 SBNO1A3KN83 1393 aa11.73□□□□□ -0.53
CDKL5-209ENST00000635828 PHRF1Q9P1Y6 1649 aaKnown RBP11.72□□□□□ -0.53
CDKL5-209ENST00000635828 NINLQ9Y2I6 1382 aa11.72□□□□□ -0.53
CDKL5-209ENST00000635828 SHPRHQ149N8 1683 aa11.72□□□□□ -0.53
CDKL5-209ENST00000635828 GCP02774 474 aa11.72□□□□□ -0.53
CDKL5-209ENST00000635828 JCADQ9P266 1359 aa11.71□□□□□ -0.53
CDKL5-209ENST00000635828 KNSTRNQ9Y448 316 aa11.71□□□□□ -0.53
CDKL5-209ENST00000635828 OVOS2A0A0J9YW53 1432 aa11.71□□□□□ -0.53
CDKL5-209ENST00000635828 OVOS2Q6IE36 1432 aa11.71□□□□□ -0.53
CDKL5-209ENST00000635828 AXIN2Q9Y2T1 843 aa11.71□□□□□ -0.53
CDKL5-209ENST00000635828 RGPD5Q99666 1765 aa11.71□□□□□ -0.54
CDKL5-209ENST00000635828 FAM83GA6ND36 823 aa11.7□□□□□ -0.54
CDKL5-209ENST00000635828 C8orf37Q96NL8 207 aa11.7□□□□□ -0.54
CDKL5-209ENST00000635828 KIAA0232Q92628 1395 aa11.7□□□□□ -0.54
CDKL5-209ENST00000635828 COL22A1Q8NFW1 1626 aaPredicted RBP11.7□□□□□ -0.54
CDKL5-209ENST00000635828 EMILIN1Q9Y6C2 1016 aa11.7□□□□□ -0.54
CDKL5-209ENST00000635828 HAP1P54257 671 aaPredicted RBP11.69□□□□□ -0.54
CDKL5-209ENST00000635828 CGNL1Q0VF96 1302 aa11.69□□□□□ -0.54
CDKL5-209ENST00000635828 MAP2P11137 1827 aaKnown RBP11.69□□□□□ -0.54
CDKL5-209ENST00000635828 PPM1GO15355 546 aaPredicted RBP11.69□□□□□ -0.54
CDKL5-209ENST00000635828 USP19O94966 1318 aa11.69□□□□□ -0.54
CDKL5-209ENST00000635828 TTC21AQ8NDW8 1320 aa11.69□□□□□ -0.54
CDKL5-209ENST00000635828 LTN1O94822 1766 aa11.68□□□□□ -0.54
CDKL5-209ENST00000635828 NLRP13Q86W25 1043 aa11.68□□□□□ -0.54
CDKL5-209ENST00000635828 COG3Q96JB2 828 aa11.68□□□□□ -0.54
CDKL5-209ENST00000635828 SRCAPQ6ZRS2 3230 aa11.68□□□□□ -0.54
CDKL5-209ENST00000635828 NFAT5O94916 1531 aa11.68□□□□□ -0.54
CDKL5-209ENST00000635828 PEAK1Q9H792 1746 aa11.68□□□□□ -0.54
CDKL5-209ENST00000635828 ARHGEF10O15013 1369 aa11.68□□□□□ -0.54
CDKL5-209ENST00000635828 CCDC184Q52MB2 194 aa11.66□□□□□ -0.54
CDKL5-209ENST00000635828 SLIT3O75094 1523 aa11.66□□□□□ -0.54
CDKL5-209ENST00000635828 MAP3K19Q56UN5 1328 aa11.66□□□□□ -0.54
CDKL5-209ENST00000635828 RGS17Q9UGC6 210 aaPredicted RBP11.66□□□□□ -0.54
CDKL5-209ENST00000635828 USP31Q70CQ4 1352 aa11.66□□□□□ -0.54
CDKL5-209ENST00000635828 ANKRD26Q9UPS8 1709 aa11.66□□□□□ -0.54
CDKL5-209ENST00000635828 MORC1Q86VD1 984 aa11.66□□□□□ -0.54
CDKL5-209ENST00000635828 HSP90AB2PQ58FF8 381 aa11.65□□□□□ -0.54
CDKL5-209ENST00000635828 LTV1Q96GA3 475 aaPredicted RBP11.65□□□□□ -0.54
CDKL5-209ENST00000635828 POLKQ9UBT6 870 aa11.65□□□□□ -0.54
CDKL5-209ENST00000635828 CAMTA1Q9Y6Y1 1673 aa11.64□□□□□ -0.55
CDKL5-209ENST00000635828 PRDM11Q9NQV5 511 aa11.64□□□□□ -0.55
CDKL5-209ENST00000635828 BTG4Q9NY30 223 aa11.64□□□□□ -0.55
CDKL5-209ENST00000635828 RGPD2P0DJD1 1756 aa11.64□□□□□ -0.55
CDKL5-209ENST00000635828 USP54Q70EL1 1684 aa11.64□□□□□ -0.55
CDKL5-209ENST00000635828 MEX3CQ5U5Q3 659 aaKnown RBP11.64□□□□□ -0.55
CDKL5-209ENST00000635828 ARHGEF25Q86VW2 580 aa11.64□□□□□ -0.55
CDKL5-209ENST00000635828 NGLY1Q96IV0 654 aa11.64□□□□□ -0.55
CDKL5-209ENST00000635828 STRN4Q9NRL3 753 aa11.64□□□□□ -0.55
CDKL5-209ENST00000635828 COL18A1P39060 1754 aa11.64□□□□□ -0.55
CDKL5-209ENST00000635828 USP35Q9P2H5 1018 aa11.63□□□□□ -0.55
CDKL5-209ENST00000635828 PLCH1Q4KWH8 1693 aa11.63□□□□□ -0.55
CDKL5-209ENST00000635828 SPATA31A6Q5VVP1 1343 aa11.63□□□□□ -0.55
CDKL5-209ENST00000635828 SENP3-EIF4A1A0A087X0R7 540 aa11.62□□□□□ -0.55
CDKL5-209ENST00000635828 AFF2P51816 1311 aa11.62□□□□□ -0.55
CDKL5-209ENST00000635828 MTHFSP49914 203 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms