RNA–Protein interactions for RNA: ENST00000635822.2

TCF4-276, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 7,805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-276ENST00000635822 MARCH6O60337 910 aa13.85□□□□□ -0.19
TCF4-276ENST00000635822 ROCK1Q13464 1354 aa13.85□□□□□ -0.19
TCF4-276ENST00000635822 PPP2R1AP30153 589 aa13.85□□□□□ -0.19
TCF4-276ENST00000635822 FKBP5Q13451 457 aaPredicted RBP13.85□□□□□ -0.19
TCF4-276ENST00000635822 C9orf78Q9NZ63 289 aaPredicted RBP13.85□□□□□ -0.19
TCF4-276ENST00000635822 FBXO3Q9UK99 471 aa13.85□□□□□ -0.19
TCF4-276ENST00000635822 NBPF1Q3BBV0 1214 aa13.85□□□□□ -0.19
TCF4-276ENST00000635822 STK3Q13188 491 aa13.85□□□□□ -0.19
TCF4-276ENST00000635822 NUTM2FA1L443 756 aa13.85□□□□□ -0.19
TCF4-276ENST00000635822 CHMP4CQ96CF2 233 aa13.84□□□□□ -0.19
TCF4-276ENST00000635822 ERC2O15083 957 aa13.84□□□□□ -0.19
TCF4-276ENST00000635822 DNAJC2Q99543 621 aaKnown RBP13.84□□□□□ -0.19
TCF4-276ENST00000635822 TRIM34Q9BYJ4 488 aa13.84□□□□□ -0.19
TCF4-276ENST00000635822 DIAPH1O60610 1272 aaKnown RBP13.84□□□□□ -0.19
TCF4-276ENST00000635822 ADCY5O95622 1261 aa13.83□□□□□ -0.19
TCF4-276ENST00000635822 NUP62CLQ9H1M0 184 aa13.83□□□□□ -0.19
TCF4-276ENST00000635822 ERLIN1O75477 346 aa13.83□□□□□ -0.2
TCF4-276ENST00000635822 KIF18AQ8NI77 898 aa13.83□□□□□ -0.2
TCF4-276ENST00000635822 GDPD2Q9HCC8 539 aa13.83□□□□□ -0.2
TCF4-276ENST00000635822 MVPQ14764 893 aaKnown RBP13.83□□□□□ -0.2
TCF4-276ENST00000635822 NBPF8Q3BBV2 869 aa13.83□□□□□ -0.2
TCF4-276ENST00000635822 MAP4K4O95819 1239 aaPredicted RBP13.83□□□□□ -0.2
TCF4-276ENST00000635822 KIF21BO75037 1637 aa13.82□□□□□ -0.2
TCF4-276ENST00000635822 LRRCC1Q9C099 1032 aa13.82□□□□□ -0.2
TCF4-276ENST00000635822 KRT85P78386 507 aa13.82□□□□□ -0.2
TCF4-276ENST00000635822 GCC1Q96CN9 775 aa13.82□□□□□ -0.2
TCF4-276ENST00000635822 CCDC94Q9BW85 323 aaPredicted RBP13.82□□□□□ -0.2
TCF4-276ENST00000635822 TMX1Q9H3N1 280 aa13.82□□□□□ -0.2
TCF4-276ENST00000635822 AMPHP49418 695 aa13.81□□□□□ -0.2
TCF4-276ENST00000635822 VPS53Q5VIR6 699 aa13.81□□□□□ -0.2
TCF4-276ENST00000635822 PDCP20941 246 aa13.81□□□□□ -0.2
TCF4-276ENST00000635822 ZSCAN23Q3MJ62 389 aa13.81□□□□□ -0.2
TCF4-276ENST00000635822 TICAM2Q86XR7 235 aa13.81□□□□□ -0.2
TCF4-276ENST00000635822 WASHC2CQ9Y4E1 1318 aa13.81□□□□□ -0.2
TCF4-276ENST00000635822 NFXL1Q6ZNB6 911 aa13.81□□□□□ -0.2
TCF4-276ENST00000635822 URI1O94763 535 aaPredicted RBP13.81□□□□□ -0.2
TCF4-276ENST00000635822 MTHFSP49914 203 aa13.81□□□□□ -0.2
TCF4-276ENST00000635822 LARP1BQ659C4 914 aaKnown RBP13.81□□□□□ -0.2
TCF4-276ENST00000635822 CNTROBQ8N137 903 aa13.81□□□□□ -0.2
TCF4-276ENST00000635822 ZNF526Q8TF50 670 aaPredicted RBP13.81□□□□□ -0.2
TCF4-276ENST00000635822 GTPBP4Q9BZE4 634 aaKnown RBP13.81□□□□□ -0.2
TCF4-276ENST00000635822 ME1P48163 572 aa13.8□□□□□ -0.2
TCF4-276ENST00000635822 PRIMPOLQ96LW4 560 aa13.8□□□□□ -0.2
TCF4-276ENST00000635822 LMAN1P49257 510 aa13.8□□□□□ -0.2
TCF4-276ENST00000635822 STK11IPQ8N1F8 1099 aa13.8□□□□□ -0.2
TCF4-276ENST00000635822 MAP3K11Q16584 847 aa13.8□□□□□ -0.2
TCF4-276ENST00000635822 ZBTB9Q96C00 473 aa13.8□□□□□ -0.2
TCF4-276ENST00000635822 PSMA5P28066 241 aa13.8□□□□□ -0.2
TCF4-276ENST00000635822 MCM5P33992 734 aa13.79□□□□□ -0.2
TCF4-276ENST00000635822 BAG4O95429 457 aaKnown RBP13.79□□□□□ -0.2
TCF4-276ENST00000635822 MLECQ14165 292 aa13.79□□□□□ -0.2
TCF4-276ENST00000635822 CCDC183Q5T5S1 534 aa13.79□□□□□ -0.2
TCF4-276ENST00000635822 SMARCE1Q969G3 411 aa13.79□□□□□ -0.2
TCF4-276ENST00000635822 SPATA32Q96LK8 384 aa13.79□□□□□ -0.2
TCF4-276ENST00000635822 ATP2B1P20020 1258 aa13.79□□□□□ -0.2
TCF4-276ENST00000635822 KIF3BO15066 747 aa13.79□□□□□ -0.2
TCF4-276ENST00000635822 SMAP1Q8IYB5 467 aaPredicted RBP13.79□□□□□ -0.2
TCF4-276ENST00000635822 ODF2Q5BJF6 829 aa13.78□□□□□ -0.2
TCF4-276ENST00000635822 PRM3Q9NNZ6 103 aa13.78□□□□□ -0.2
TCF4-276ENST00000635822 CLIP2Q9UDT6 1046 aa13.78□□□□□ -0.2
TCF4-276ENST00000635822 NOLC1Q14978 699 aaKnown RBP eCLIP13.78□□□□□ -0.2
TCF4-276ENST00000635822 KRT222Q8N1A0 295 aa13.78□□□□□ -0.2
TCF4-276ENST00000635822 LRRFIP2Q9Y608 721 aaKnown RBP13.78□□□□□ -0.2
TCF4-276ENST00000635822 GOLGA6L10A6NI86 522 aa13.77□□□□□ -0.2
TCF4-276ENST00000635822 TRDNQ13061 729 aa13.77□□□□□ -0.2
TCF4-276ENST00000635822 NINLQ9Y2I6 1382 aa13.77□□□□□ -0.2
TCF4-276ENST00000635822 G3BP1Q13283 466 aaKnown RBP eCLIP13.77□□□□□ -0.2
TCF4-276ENST00000635822 STK38Q15208 465 aa13.77□□□□□ -0.21
TCF4-276ENST00000635822 OFD1O75665 1012 aa13.77□□□□□ -0.21
TCF4-276ENST00000635822 GNAI1P63096 354 aa13.77□□□□□ -0.21
TCF4-276ENST00000635822 FILIP1LQ4L180 1135 aa13.77□□□□□ -0.21
TCF4-276ENST00000635822 ATF7IPQ6VMQ6 1270 aa13.77□□□□□ -0.21
TCF4-276ENST00000635822 RSPH4AQ5TD94 716 aa13.77□□□□□ -0.21
TCF4-276ENST00000635822 TBC1D32Q96NH3 1257 aa13.76□□□□□ -0.21
TCF4-276ENST00000635822 UPF3BQ9BZI7 483 aaKnown RBP13.76□□□□□ -0.21
TCF4-276ENST00000635822 PPFIBP1Q86W92 1011 aa13.76□□□□□ -0.21
TCF4-276ENST00000635822 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.76□□□□□ -0.21
TCF4-276ENST00000635822 V9GYY5 206 aaPredicted RBP13.76□□□□□ -0.21
TCF4-276ENST00000635822 MNAT1P51948 309 aa13.76□□□□□ -0.21
TCF4-276ENST00000635822 TTC12Q9H892 705 aaPredicted RBP13.76□□□□□ -0.21
TCF4-276ENST00000635822 FGD6Q6ZV73 1430 aa13.76□□□□□ -0.21
TCF4-276ENST00000635822 FERMT3Q86UX7 667 aa13.76□□□□□ -0.21
TCF4-276ENST00000635822 CKAP2LQ8IYA6 745 aa13.76□□□□□ -0.21
TCF4-276ENST00000635822 DYDC1Q8WWB3 177 aa13.76□□□□□ -0.21
TCF4-276ENST00000635822 SURF6O75683 361 aaKnown RBP13.76□□□□□ -0.21
TCF4-276ENST00000635822 SAFBQ15424 915 aaKnown RBP eCLIP13.76□□□□□ -0.21
TCF4-276ENST00000635822 CCDC47Q96A33 483 aaKnown RBP13.76□□□□□ -0.21
TCF4-276ENST00000635822 IGHDP01880 384 aa13.75□□□□□ -0.21
TCF4-276ENST00000635822 SLFN5Q08AF3 891 aa13.75□□□□□ -0.21
TCF4-276ENST00000635822 PAXIP1Q6ZW49 1069 aaPredicted RBP13.75□□□□□ -0.21
TCF4-276ENST00000635822 CYP46A1Q9Y6A2 500 aa13.75□□□□□ -0.21
TCF4-276ENST00000635822 KLHL40Q2TBA0 621 aa13.75□□□□□ -0.21
TCF4-276ENST00000635822 CEP135Q66GS9 1140 aa13.75□□□□□ -0.21
TCF4-276ENST00000635822 ZKSCAN5Q9Y2L8 839 aa13.75□□□□□ -0.21
TCF4-276ENST00000635822 ZNF396Q96N95 335 aaPredicted RBP13.75□□□□□ -0.21
TCF4-276ENST00000635822 EVC2Q86UK5 1308 aa13.74□□□□□ -0.21
TCF4-276ENST00000635822 SRRTQ9BXP5 876 aaKnown RBP13.74□□□□□ -0.21
TCF4-276ENST00000635822 CASQ1P31415 396 aa13.74□□□□□ -0.21
TCF4-276ENST00000635822 MEX3CQ5U5Q3 659 aaKnown RBP13.74□□□□□ -0.21
TCF4-276ENST00000635822 GGNBP2Q9H3C7 697 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms