RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 DCAF11Q8TEB1 546 aa19.03■□□□□ 0.64
LINC00339-206ENST00000634451 ARHGEF28Q8N1W1 1705 aaKnown RBP19.03■□□□□ 0.64
LINC00339-206ENST00000634451 WASLO00401 505 aaPredicted RBP19.01■□□□□ 0.63
LINC00339-206ENST00000634451 SF3B2Q13435 895 aaKnown RBP19.01■□□□□ 0.63
LINC00339-206ENST00000634451 GPRASP1Q5JY77 1395 aa19.01■□□□□ 0.63
LINC00339-206ENST00000634451 ATP7BP35670 1465 aa19■□□□□ 0.63
LINC00339-206ENST00000634451 THSD7AQ9UPZ6 1657 aa19■□□□□ 0.63
LINC00339-206ENST00000634451 PAK3O75914 559 aaPredicted RBP18.99■□□□□ 0.63
LINC00339-206ENST00000634451 EN1Q05925 392 aaPredicted RBP18.99■□□□□ 0.63
LINC00339-206ENST00000634451 CHRNA2Q15822 529 aa18.99■□□□□ 0.63
LINC00339-206ENST00000634451 NUTM2GQ5VZR2 741 aa18.99■□□□□ 0.63
LINC00339-206ENST00000634451 SPATA31A5Q5VU36 1347 aa18.99■□□□□ 0.63
LINC00339-206ENST00000634451 SPATA31A7Q8IWB4 1347 aa18.99■□□□□ 0.63
LINC00339-206ENST00000634451 NGDNQ8NEJ9 315 aaKnown RBP18.98■□□□□ 0.63
LINC00339-206ENST00000634451 LRP5O75197 1615 aa18.98■□□□□ 0.63
LINC00339-206ENST00000634451 TNS1Q9HBL0 1735 aaKnown RBP18.97■□□□□ 0.63
LINC00339-206ENST00000634451 PHRF1Q9P1Y6 1649 aaKnown RBP18.97■□□□□ 0.63
LINC00339-206ENST00000634451 KIAA0232Q92628 1395 aa18.96■□□□□ 0.63
LINC00339-206ENST00000634451 PRDM11Q9NQV5 511 aa18.96■□□□□ 0.63
LINC00339-206ENST00000634451 RGPD1P0DJD0 1748 aa18.94■□□□□ 0.62
LINC00339-206ENST00000634451 HRCP23327 699 aa18.94■□□□□ 0.62
LINC00339-206ENST00000634451 BAG6P46379 1132 aa18.94■□□□□ 0.62
LINC00339-206ENST00000634451 NUDT16Q96DE0 195 aaKnown RBP18.94■□□□□ 0.62
LINC00339-206ENST00000634451 EIF3AQ14152 1382 aaKnown RBP18.93■□□□□ 0.62
LINC00339-206ENST00000634451 ZC3H6P61129 1189 aaKnown RBP18.93■□□□□ 0.62
LINC00339-206ENST00000634451 STRN4Q9NRL3 753 aa18.93■□□□□ 0.62
LINC00339-206ENST00000634451 ITSN1Q15811 1721 aa18.93■□□□□ 0.62
LINC00339-206ENST00000634451 TOPAZ1Q8N9V7 1692 aa18.92■□□□□ 0.62
LINC00339-206ENST00000634451 R3HDM1Q15032 1099 aaKnown RBP18.91■□□□□ 0.62
LINC00339-206ENST00000634451 EZH2Q15910 746 aaKnown RBP18.91■□□□□ 0.62
LINC00339-206ENST00000634451 CDK19Q9BWU1 502 aa18.91■□□□□ 0.62
LINC00339-206ENST00000634451 SPATA31A1Q5TZJ5 1347 aa18.91■□□□□ 0.62
LINC00339-206ENST00000634451 USP35Q9P2H5 1018 aa18.9■□□□□ 0.62
LINC00339-206ENST00000634451 NRKQ7Z2Y5 1582 aa18.89■□□□□ 0.62
LINC00339-206ENST00000634451 TRIM37O94972 964 aa18.88■□□□□ 0.61
LINC00339-206ENST00000634451 ACEP12821 1306 aa18.88■□□□□ 0.61
LINC00339-206ENST00000634451 CAMTA1Q9Y6Y1 1673 aa18.88■□□□□ 0.61
LINC00339-206ENST00000634451 NBPF1Q3BBV0 1214 aa18.87■□□□□ 0.61
LINC00339-206ENST00000634451 DISP2A7MBM2 1401 aa18.86■□□□□ 0.61
LINC00339-206ENST00000634451 POLR3AO14802 1390 aaPredicted RBP18.86■□□□□ 0.61
LINC00339-206ENST00000634451 SSH2Q76I76 1423 aa18.85■□□□□ 0.61
LINC00339-206ENST00000634451 NBPF8Q3BBV2 869 aa18.85■□□□□ 0.61
LINC00339-206ENST00000634451 LARP1Q6PKG0 1096 aaKnown RBP18.85■□□□□ 0.61
LINC00339-206ENST00000634451 CAMKK2Q96RR4 588 aa18.84■□□□□ 0.61
LINC00339-206ENST00000634451 LMO7Q8WWI1 1683 aa18.84■□□□□ 0.61
LINC00339-206ENST00000634451 CCDC61Q9Y6R9 512 aa18.81■□□□□ 0.6
LINC00339-206ENST00000634451 NUP188Q5SRE5 1749 aa18.8■□□□□ 0.6
LINC00339-206ENST00000634451 USP19O94966 1318 aa18.8■□□□□ 0.6
LINC00339-206ENST00000634451 PLEKHG3A1L390 1219 aa18.8■□□□□ 0.6
LINC00339-206ENST00000634451 APBA3O96018 575 aa18.8■□□□□ 0.6
LINC00339-206ENST00000634451 ABTB2Q8N961 1025 aa18.8■□□□□ 0.6
LINC00339-206ENST00000634451 CABP2Q9NPB3 220 aa18.8■□□□□ 0.6
LINC00339-206ENST00000634451 KIAA1210Q9ULL0 1709 aa18.8■□□□□ 0.6
LINC00339-206ENST00000634451 RREB1Q92766 1687 aa18.79■□□□□ 0.6
LINC00339-206ENST00000634451 FAM196AQ6ZSG2 479 aa18.79■□□□□ 0.6
LINC00339-206ENST00000634451 PPIP5K1Q6PFW1 1433 aa18.78■□□□□ 0.6
LINC00339-206ENST00000634451 EVA1CP58658 441 aa18.78■□□□□ 0.6
LINC00339-206ENST00000634451 ZBTB7CA1YPR0 619 aa18.77■□□□□ 0.6
LINC00339-206ENST00000634451 BARGINQ6ZT62 677 aa18.77■□□□□ 0.6
LINC00339-206ENST00000634451 STAC3Q96MF2 364 aa18.77■□□□□ 0.6
LINC00339-206ENST00000634451 CPDO75976 1380 aa18.77■□□□□ 0.6
LINC00339-206ENST00000634451 SRPK2P78362 688 aaKnown RBP18.76■□□□□ 0.59
LINC00339-206ENST00000634451 TCP11L2Q8N4U5 519 aa18.76■□□□□ 0.59
LINC00339-206ENST00000634451 COL5A2P05997 1499 aaPredicted RBP18.76■□□□□ 0.59
LINC00339-206ENST00000634451 QRICH2Q9H0J4 1663 aa18.76■□□□□ 0.59
LINC00339-206ENST00000634451 GCP02774 474 aa18.75■□□□□ 0.59
LINC00339-206ENST00000634451 PDE3BQ13370 1112 aa18.74■□□□□ 0.59
LINC00339-206ENST00000634451 PTF1AQ7RTS3 328 aa18.74■□□□□ 0.59
LINC00339-206ENST00000634451 PARP4Q9UKK3 1724 aaKnown RBP18.73■□□□□ 0.59
LINC00339-206ENST00000634451 CENPJQ9HC77 1338 aaPredicted RBP18.73■□□□□ 0.59
LINC00339-206ENST00000634451 PEAK1Q9H792 1746 aa18.72■□□□□ 0.59
LINC00339-206ENST00000634451 LRRC37A3O60309 1634 aa18.72■□□□□ 0.59
LINC00339-206ENST00000634451 CABP1Q9NZU7 370 aa18.72■□□□□ 0.59
LINC00339-206ENST00000634451 PIK3C2AO00443 1686 aa18.71■□□□□ 0.59
LINC00339-206ENST00000634451 USP6P35125 1406 aa18.71■□□□□ 0.59
LINC00339-206ENST00000634451 COL18A1P39060 1754 aa18.7■□□□□ 0.58
LINC00339-206ENST00000634451 SLIT3O75094 1523 aa18.7■□□□□ 0.58
LINC00339-206ENST00000634451 NLRP13Q86W25 1043 aa18.7■□□□□ 0.58
LINC00339-206ENST00000634451 SBF2Q86WG5 1849 aa18.69■□□□□ 0.58
LINC00339-206ENST00000634451 PARD3Q8TEW0 1356 aa18.68■□□□□ 0.58
LINC00339-206ENST00000634451 CRB1P82279 1406 aa18.68■□□□□ 0.58
LINC00339-206ENST00000634451 NLRP6P59044 892 aa18.68■□□□□ 0.58
LINC00339-206ENST00000634451 AXIN2Q9Y2T1 843 aa18.68■□□□□ 0.58
LINC00339-206ENST00000634451 RGPD5Q99666 1765 aa18.67■□□□□ 0.58
LINC00339-206ENST00000634451 WNK3Q9BYP7 1800 aa18.67■□□□□ 0.58
LINC00339-206ENST00000634451 SOX12O15370 315 aa18.66■□□□□ 0.58
LINC00339-206ENST00000634451 ANO8Q9HCE9 1232 aaPredicted RBP18.66■□□□□ 0.58
LINC00339-206ENST00000634451 L3MBTL2Q969R5 705 aa18.65■□□□□ 0.58
LINC00339-206ENST00000634451 PDGFDQ9GZP0 370 aaPredicted RBP18.65■□□□□ 0.58
LINC00339-206ENST00000634451 AATKQ6ZMQ8 1374 aa18.65■□□□□ 0.58
LINC00339-206ENST00000634451 SIN3AQ96ST3 1273 aa18.64■□□□□ 0.57
LINC00339-206ENST00000634451 THRAP3Q9Y2W1 955 aaKnown RBP18.64■□□□□ 0.57
LINC00339-206ENST00000634451 OVOS2A0A0G2JMS6 1433 aa18.64■□□□□ 0.57
LINC00339-206ENST00000634451 OVOS2A0A0J9YW53 1432 aa18.64■□□□□ 0.57
LINC00339-206ENST00000634451 OVOS2Q6IE36 1432 aa18.64■□□□□ 0.57
LINC00339-206ENST00000634451 TRPM1Q7Z4N2 1603 aa18.63■□□□□ 0.57
LINC00339-206ENST00000634451 TOM1L2Q6ZVM7 507 aa18.62■□□□□ 0.57
LINC00339-206ENST00000634451 AKAP12Q02952 1782 aa18.61■□□□□ 0.57
LINC00339-206ENST00000634451 CPSF1Q10570 1443 aaKnown RBP18.61■□□□□ 0.57
LINC00339-206ENST00000634451 MARCH10Q8NA82 808 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms