RNA–Protein interactions for RNA: ENST00000633167.1

PHACTR4-208, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 5

Gene PHACTR4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-208ENST00000633167 LYPD8Q6UX82 237 aa8.25□□□□□ -1.09
PHACTR4-208ENST00000633167 TRIM46Q7Z4K8 759 aa8.25□□□□□ -1.09
PHACTR4-208ENST00000633167 LINC01559Q495D7 138 aa8.24□□□□□ -1.09
PHACTR4-208ENST00000633167 PARP9Q8IXQ6 854 aa8.24□□□□□ -1.09
PHACTR4-208ENST00000633167 ZBTB3Q9H5J0 574 aa8.24□□□□□ -1.09
PHACTR4-208ENST00000633167 NXF1Q9UBU9 619 aaKnown RBP8.24□□□□□ -1.09
PHACTR4-208ENST00000633167 BMP1P13497 986 aa8.23□□□□□ -1.09
PHACTR4-208ENST00000633167 LCE2CQ5TA81 110 aa8.23□□□□□ -1.09
PHACTR4-208ENST00000633167 TRIM66O15016 1216 aa8.22□□□□□ -1.09
PHACTR4-208ENST00000633167 FAM174AQ8TBP5 190 aa8.22□□□□□ -1.09
PHACTR4-208ENST00000633167 AK7Q96M32 723 aa8.22□□□□□ -1.09
PHACTR4-208ENST00000633167 TLL2Q9Y6L7 1015 aa8.22□□□□□ -1.09
PHACTR4-208ENST00000633167 CTHP32929 405 aa8.21□□□□□ -1.1
PHACTR4-208ENST00000633167 NNTQ13423 1086 aa8.21□□□□□ -1.1
PHACTR4-208ENST00000633167 CFAP99D6REC4 459 aa8.2□□□□□ -1.1
PHACTR4-208ENST00000633167 ADH1CP00326 375 aa8.2□□□□□ -1.1
PHACTR4-208ENST00000633167 F12P00748 615 aaPredicted RBP8.2□□□□□ -1.1
PHACTR4-208ENST00000633167 HRCP23327 699 aa8.2□□□□□ -1.1
PHACTR4-208ENST00000633167 TUSC1Q2TAM9 212 aa8.2□□□□□ -1.1
PHACTR4-208ENST00000633167 IRF7Q92985 503 aa8.2□□□□□ -1.1
PHACTR4-208ENST00000633167 CDK15Q96Q40 435 aa8.2□□□□□ -1.1
PHACTR4-208ENST00000633167 RIC3Q7Z5B4 369 aa8.19□□□□□ -1.1
PHACTR4-208ENST00000633167 PCDHB15Q9Y5E8 787 aa8.19□□□□□ -1.1
PHACTR4-208ENST00000633167 TIMP2P16035 220 aa8.18□□□□□ -1.1
PHACTR4-208ENST00000633167 SCARF1Q14162 830 aa8.18□□□□□ -1.1
PHACTR4-208ENST00000633167 ZFP42Q96MM3 310 aa8.18□□□□□ -1.1
PHACTR4-208ENST00000633167 FAM181BA6NEQ2 426 aa8.17□□□□□ -1.1
PHACTR4-208ENST00000633167 H3BM21 787 aa8.17□□□□□ -1.1
PHACTR4-208ENST00000633167 MRPL14Q6P1L8 145 aaKnown RBP8.17□□□□□ -1.1
PHACTR4-208ENST00000633167 WDR4P57081 412 aaKnown RBP8.16□□□□□ -1.1
PHACTR4-208ENST00000633167 NR5A1Q13285 461 aa8.16□□□□□ -1.1
PHACTR4-208ENST00000633167 BPHLQ86WA6 291 aaPredicted RBP8.16□□□□□ -1.1
PHACTR4-208ENST00000633167 ARMC2Q8NEN0 867 aa8.16□□□□□ -1.1
PHACTR4-208ENST00000633167 KLF16Q9BXK1 252 aaPredicted RBP8.16□□□□□ -1.1
PHACTR4-208ENST00000633167 MAP10Q9P2G4 905 aa8.16□□□□□ -1.1
PHACTR4-208ENST00000633167 FOXJ1Q92949 421 aa8.14□□□□□ -1.11
PHACTR4-208ENST00000633167 MYSM1Q5VVJ2 828 aa8.13□□□□□ -1.11
PHACTR4-208ENST00000633167 CABLES1Q8TDN4 633 aa8.13□□□□□ -1.11
PHACTR4-208ENST00000633167 LILRB3O75022 631 aa8.12□□□□□ -1.11
PHACTR4-208ENST00000633167 GMPRP36959 345 aa8.12□□□□□ -1.11
PHACTR4-208ENST00000633167 PDE4DQ08499 809 aa8.12□□□□□ -1.11
PHACTR4-208ENST00000633167 AGERQ15109 404 aa8.12□□□□□ -1.11
PHACTR4-208ENST00000633167 NBPF14Q5TI25 921 aa8.12□□□□□ -1.11
PHACTR4-208ENST00000633167 HELBQ8NG08 1087 aaPredicted RBP8.12□□□□□ -1.11
PHACTR4-208ENST00000633167 C1QTNF2Q9BXJ5 285 aa8.12□□□□□ -1.11
PHACTR4-208ENST00000633167 MAP4K5Q9Y4K4 846 aa8.12□□□□□ -1.11
PHACTR4-208ENST00000633167 NUTM2BA6NNL0 878 aaPredicted RBP8.11□□□□□ -1.11
PHACTR4-208ENST00000633167 NUTM2EB1AL46 878 aaPredicted RBP8.11□□□□□ -1.11
PHACTR4-208ENST00000633167 PER1O15534 1290 aaPredicted RBP8.11□□□□□ -1.11
PHACTR4-208ENST00000633167 NUTM2DQ5VT03 806 aaPredicted RBP8.11□□□□□ -1.11
PHACTR4-208ENST00000633167 NUTM2AQ8IVF1 878 aaPredicted RBP8.11□□□□□ -1.11
PHACTR4-208ENST00000633167 PURBQ96QR8 312 aaKnown RBP8.11□□□□□ -1.11
PHACTR4-208ENST00000633167 LIMD1Q9UGP4 676 aa8.11□□□□□ -1.11
PHACTR4-208ENST00000633167 ZIC2O95409 532 aaPredicted RBP8.1□□□□□ -1.11
PHACTR4-208ENST00000633167 VSIG8P0DPA2 414 aa8.1□□□□□ -1.11
PHACTR4-208ENST00000633167 GRM5P41594 1212 aa8.1□□□□□ -1.11
PHACTR4-208ENST00000633167 ARID5BQ14865 1188 aa8.1□□□□□ -1.11
PHACTR4-208ENST00000633167 CSPP1Q1MSJ5 1256 aa8.1□□□□□ -1.11
PHACTR4-208ENST00000633167 C4orf48Q5BLP8 95 aa8.1□□□□□ -1.11
PHACTR4-208ENST00000633167 SH3RF1Q7Z6J0 888 aa8.1□□□□□ -1.11
PHACTR4-208ENST00000633167 TRMT44Q8IYL2 757 aaKnown RBP8.1□□□□□ -1.11
PHACTR4-208ENST00000633167 ZSCAN1Q8NBB4 408 aa8.1□□□□□ -1.11
PHACTR4-208ENST00000633167 GPKOWQ92917 476 aaPredicted RBP eCLIP8.1□□□□□ -1.11
PHACTR4-208ENST00000633167 QPCTQ16769 361 aa8.09□□□□□ -1.11
PHACTR4-208ENST00000633167 ITPKCQ96DU7 683 aa8.09□□□□□ -1.11
PHACTR4-208ENST00000633167 RSPH6AQ9H0K4 717 aa8.09□□□□□ -1.11
PHACTR4-208ENST00000633167 UPP2O95045 317 aa8.08□□□□□ -1.12
PHACTR4-208ENST00000633167 NR3C2P08235 984 aa8.08□□□□□ -1.12
PHACTR4-208ENST00000633167 LORP23490 312 aaPredicted RBP8.08□□□□□ -1.12
PHACTR4-208ENST00000633167 CLK2P49760 499 aaKnown RBP8.08□□□□□ -1.12
PHACTR4-208ENST00000633167 ZFAND3Q9H8U3 227 aa8.08□□□□□ -1.12
PHACTR4-208ENST00000633167 ERBB4Q15303 1308 aa8.07□□□□□ -1.12
PHACTR4-208ENST00000633167 VEGFBP49765 207 aa8.07□□□□□ -1.12
PHACTR4-208ENST00000633167 SH3BP5LQ7L8J4 393 aa8.07□□□□□ -1.12
PHACTR4-208ENST00000633167 MEIOBQ8N635 442 aa8.07□□□□□ -1.12
PHACTR4-208ENST00000633167 TSC1Q92574 1164 aa8.07□□□□□ -1.12
PHACTR4-208ENST00000633167 MAN1A2O60476 641 aa8.05□□□□□ -1.12
PHACTR4-208ENST00000633167 LINC00528Q8N1L1 170 aa8.05□□□□□ -1.12
PHACTR4-208ENST00000633167 EMILIN1Q9Y6C2 1016 aa8.05□□□□□ -1.12
PHACTR4-208ENST00000633167 FSHRP23945 695 aa8.04□□□□□ -1.12
PHACTR4-208ENST00000633167 VASH1Q7L8A9 365 aaPredicted RBP8.04□□□□□ -1.12
PHACTR4-208ENST00000633167 BMP2P12643 396 aa8.03□□□□□ -1.12
PHACTR4-208ENST00000633167 RTL5Q5HYW3 569 aaPredicted RBP8.03□□□□□ -1.12
PHACTR4-208ENST00000633167 C6orf118Q5T5N4 469 aa8.03□□□□□ -1.12
PHACTR4-208ENST00000633167 TSEN34Q9BSV6 310 aaKnown RBP8.03□□□□□ -1.12
PHACTR4-208ENST00000633167 SOBPA7XYQ1 873 aa8.02□□□□□ -1.13
PHACTR4-208ENST00000633167 CCDC116Q8IYX3 515 aa8.02□□□□□ -1.13
PHACTR4-208ENST00000633167 SLC24A3Q9HC58 644 aa8.02□□□□□ -1.13
PHACTR4-208ENST00000633167 CDV3Q9UKY7 258 aaKnown RBP8.02□□□□□ -1.13
PHACTR4-208ENST00000633167 SOS2Q07890 1332 aaPredicted RBP8.02□□□□□ -1.13
PHACTR4-208ENST00000633167 ZC3H4Q9UPT8 1303 aaKnown RBP8.02□□□□□ -1.13
PHACTR4-208ENST00000633167 MAGEB6P1A0A0J9YX57 407 aa8.01□□□□□ -1.13
PHACTR4-208ENST00000633167 ERFEQ4G0M1 354 aa8.01□□□□□ -1.13
PHACTR4-208ENST00000633167 PDXDC2PQ6P474 469 aa8.01□□□□□ -1.13
PHACTR4-208ENST00000633167 PPFIA3O75145 1194 aa7.99□□□□□ -1.13
PHACTR4-208ENST00000633167 PGPEP1Q9NXJ5 209 aa7.99□□□□□ -1.13
PHACTR4-208ENST00000633167 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.98□□□□□ -1.13
PHACTR4-208ENST00000633167 POLR3EQ9NVU0 708 aa7.98□□□□□ -1.13
PHACTR4-208ENST00000633167 FKBPLQ9UIM3 349 aa7.98□□□□□ -1.13
PHACTR4-208ENST00000633167 DNMT3LQ9UJW3 386 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms