RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 FYB1O15117 783 aa18.89■□□□□ 0.61
LIMS4-204ENST00000632897 AMOTL2Q9Y2J4 779 aa18.89■□□□□ 0.61
LIMS4-204ENST00000632897 MON2Q7Z3U7 1717 aa18.88■□□□□ 0.61
LIMS4-204ENST00000632897 TOPAZ1Q8N9V7 1692 aa18.88■□□□□ 0.61
LIMS4-204ENST00000632897 TMEM94Q12767 1356 aa18.88■□□□□ 0.61
LIMS4-204ENST00000632897 AKAP12Q02952 1782 aa18.88■□□□□ 0.61
LIMS4-204ENST00000632897 ITSN1Q15811 1721 aa18.87■□□□□ 0.61
LIMS4-204ENST00000632897 TNNT2P45379 298 aaPredicted RBP18.87■□□□□ 0.61
LIMS4-204ENST00000632897 MTHFSP49914 203 aa18.87■□□□□ 0.61
LIMS4-204ENST00000632897 PROSER2Q86WR7 435 aaPredicted RBP18.87■□□□□ 0.61
LIMS4-204ENST00000632897 PHF23Q9BUL5 403 aaPredicted RBP18.87■□□□□ 0.61
LIMS4-204ENST00000632897 RNF123Q5XPI4 1314 aa18.86■□□□□ 0.61
LIMS4-204ENST00000632897 GGNBP2Q9H3C7 697 aa18.86■□□□□ 0.61
LIMS4-204ENST00000632897 CHD2O14647 1828 aaKnown RBP18.85■□□□□ 0.61
LIMS4-204ENST00000632897 MSH6P52701 1360 aa18.85■□□□□ 0.61
LIMS4-204ENST00000632897 ZNF692Q9BU19 519 aaPredicted RBP18.84■□□□□ 0.61
LIMS4-204ENST00000632897 SENP3-EIF4A1A0A087X0R7 540 aa18.84■□□□□ 0.61
LIMS4-204ENST00000632897 PELP1Q8IZL8 1130 aaKnown RBP18.84■□□□□ 0.61
LIMS4-204ENST00000632897 SALL2Q9Y467 1007 aaPredicted RBP18.84■□□□□ 0.61
LIMS4-204ENST00000632897 PRR36Q9H6K5 1346 aa18.83■□□□□ 0.61
LIMS4-204ENST00000632897 ZNF521Q96K83 1311 aa18.82■□□□□ 0.6
LIMS4-204ENST00000632897 COL3A1P02461 1466 aaPredicted RBP18.81■□□□□ 0.6
LIMS4-204ENST00000632897 PLEKHG3A1L390 1219 aa18.81■□□□□ 0.6
LIMS4-204ENST00000632897 NCOA3Q9Y6Q9 1424 aa18.81■□□□□ 0.6
LIMS4-204ENST00000632897 CCDC146Q8IYE0 955 aa18.79■□□□□ 0.6
LIMS4-204ENST00000632897 ROBO1Q9Y6N7 1651 aa18.79■□□□□ 0.6
LIMS4-204ENST00000632897 NRKQ7Z2Y5 1582 aa18.79■□□□□ 0.6
LIMS4-204ENST00000632897 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
LIMS4-204ENST00000632897 PNPLA6Q8IY17 1366 aa18.78■□□□□ 0.6
LIMS4-204ENST00000632897 ANKARQ7Z5J8 1434 aa18.78■□□□□ 0.6
LIMS4-204ENST00000632897 APAF1O14727 1248 aa18.77■□□□□ 0.6
LIMS4-204ENST00000632897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.77■□□□□ 0.6
LIMS4-204ENST00000632897 RUNDC1Q96C34 613 aa18.77■□□□□ 0.6
LIMS4-204ENST00000632897 GOLGA2Q08379 1002 aa18.77■□□□□ 0.59
LIMS4-204ENST00000632897 CDCA7LQ96GN5 454 aa18.77■□□□□ 0.59
LIMS4-204ENST00000632897 AATKQ6ZMQ8 1374 aa18.76■□□□□ 0.59
LIMS4-204ENST00000632897 RCAN3Q9UKA8 241 aa18.76■□□□□ 0.59
LIMS4-204ENST00000632897 IRX6P78412 446 aaPredicted RBP18.74■□□□□ 0.59
LIMS4-204ENST00000632897 C14orf37Q86TY3 774 aa18.74■□□□□ 0.59
LIMS4-204ENST00000632897 USP6P35125 1406 aa18.74■□□□□ 0.59
LIMS4-204ENST00000632897 FMN2Q9NZ56 1722 aa18.74■□□□□ 0.59
LIMS4-204ENST00000632897 ACEP12821 1306 aa18.73■□□□□ 0.59
LIMS4-204ENST00000632897 COG3Q96JB2 828 aa18.73■□□□□ 0.59
LIMS4-204ENST00000632897 PPP4R2Q9NY27 417 aa18.73■□□□□ 0.59
LIMS4-204ENST00000632897 NME9Q86XW9 330 aa18.72■□□□□ 0.59
LIMS4-204ENST00000632897 CDK12Q9NYV4 1490 aaPredicted RBP18.72■□□□□ 0.59
LIMS4-204ENST00000632897 TTC21BQ7Z4L5 1316 aa18.72■□□□□ 0.59
LIMS4-204ENST00000632897 U2AF1L5P0DN76 240 aaPredicted RBP18.71■□□□□ 0.59
LIMS4-204ENST00000632897 U2AF1Q01081 240 aaKnown RBP eCLIP18.71■□□□□ 0.59
LIMS4-204ENST00000632897 SLFN5Q08AF3 891 aa18.71■□□□□ 0.59
LIMS4-204ENST00000632897 SLAIN2Q9P270 581 aa18.71■□□□□ 0.59
LIMS4-204ENST00000632897 PHLPP1O60346 1717 aa18.71■□□□□ 0.59
LIMS4-204ENST00000632897 SSH2Q76I76 1423 aa18.71■□□□□ 0.59
LIMS4-204ENST00000632897 DIAPH1O60610 1272 aaKnown RBP18.71■□□□□ 0.59
LIMS4-204ENST00000632897 RRP1P56182 461 aaKnown RBP18.71■□□□□ 0.59
LIMS4-204ENST00000632897 DUSP27Q5VZP5 1158 aa18.71■□□□□ 0.59
LIMS4-204ENST00000632897 CADPS2Q86UW7 1296 aa18.71■□□□□ 0.59
LIMS4-204ENST00000632897 TRMT2AQ8IZ69 625 aaKnown RBP18.71■□□□□ 0.59
LIMS4-204ENST00000632897 POLKQ9UBT6 870 aa18.71■□□□□ 0.59
LIMS4-204ENST00000632897 TTC21AQ8NDW8 1320 aa18.7■□□□□ 0.58
LIMS4-204ENST00000632897 E9PSI1 815 aa18.7■□□□□ 0.58
LIMS4-204ENST00000632897 CCDC27Q2M243 656 aa18.7■□□□□ 0.58
LIMS4-204ENST00000632897 RBM33Q96EV2 1170 aaKnown RBP18.7■□□□□ 0.58
LIMS4-204ENST00000632897 PNNQ9H307 717 aaKnown RBP18.7■□□□□ 0.58
LIMS4-204ENST00000632897 NALCNQ8IZF0 1738 aa18.69■□□□□ 0.58
LIMS4-204ENST00000632897 OVOS2A0A0J9YW53 1432 aa18.69■□□□□ 0.58
LIMS4-204ENST00000632897 OVOS2Q6IE36 1432 aa18.69■□□□□ 0.58
LIMS4-204ENST00000632897 MAP2P11137 1827 aaKnown RBP18.68■□□□□ 0.58
LIMS4-204ENST00000632897 ATF3P18847 181 aa18.68■□□□□ 0.58
LIMS4-204ENST00000632897 TCP11L2Q8N4U5 519 aa18.68■□□□□ 0.58
LIMS4-204ENST00000632897 WWC1Q8IX03 1113 aa18.67■□□□□ 0.58
LIMS4-204ENST00000632897 C19orf44Q9H6X5 657 aa18.67■□□□□ 0.58
LIMS4-204ENST00000632897 U2SURPO15042 1029 aaKnown RBP18.66■□□□□ 0.58
LIMS4-204ENST00000632897 DCCP43146 1447 aa18.66■□□□□ 0.58
LIMS4-204ENST00000632897 ADGRL3Q9HAR2 1447 aa18.66■□□□□ 0.58
LIMS4-204ENST00000632897 NUTM2FA1L443 756 aa18.65■□□□□ 0.58
LIMS4-204ENST00000632897 WDR63Q8IWG1 891 aa18.65■□□□□ 0.58
LIMS4-204ENST00000632897 PLEKHF1Q96S99 279 aa18.65■□□□□ 0.58
LIMS4-204ENST00000632897 RGPD8O14715 1765 aaPredicted RBP18.65■□□□□ 0.58
LIMS4-204ENST00000632897 JCADQ9P266 1359 aa18.65■□□□□ 0.58
LIMS4-204ENST00000632897 ZRANB1Q9UGI0 708 aa18.65■□□□□ 0.58
LIMS4-204ENST00000632897 USP31Q70CQ4 1352 aa18.64■□□□□ 0.58
LIMS4-204ENST00000632897 NGDNQ8NEJ9 315 aaKnown RBP18.64■□□□□ 0.57
LIMS4-204ENST00000632897 MAPK8IP3Q9UPT6 1336 aa18.63■□□□□ 0.57
LIMS4-204ENST00000632897 FCHSD2O94868 740 aa18.62■□□□□ 0.57
LIMS4-204ENST00000632897 EMILIN1Q9Y6C2 1016 aa18.62■□□□□ 0.57
LIMS4-204ENST00000632897 PMFBP1Q8TBY8 1022 aa18.61■□□□□ 0.57
LIMS4-204ENST00000632897 COL16A1Q07092 1604 aaPredicted RBP18.61■□□□□ 0.57
LIMS4-204ENST00000632897 AHDC1Q5TGY3 1603 aaPredicted RBP18.61■□□□□ 0.57
LIMS4-204ENST00000632897 USP54Q70EL1 1684 aa18.61■□□□□ 0.57
LIMS4-204ENST00000632897 PPM1GO15355 546 aaPredicted RBP18.6■□□□□ 0.57
LIMS4-204ENST00000632897 IL13P35225 146 aa18.59■□□□□ 0.57
LIMS4-204ENST00000632897 SPINK5Q9NQ38 1064 aaPredicted RBP18.59■□□□□ 0.57
LIMS4-204ENST00000632897 RRP7AQ9Y3A4 280 aaKnown RBP18.59■□□□□ 0.57
LIMS4-204ENST00000632897 SPATA31A6Q5VVP1 1343 aa18.58■□□□□ 0.57
LIMS4-204ENST00000632897 PIK3C2AO00443 1686 aa18.58■□□□□ 0.57
LIMS4-204ENST00000632897 FBLN1P23142 703 aa18.58■□□□□ 0.56
LIMS4-204ENST00000632897 TMPOP42166 694 aaKnown RBP18.58■□□□□ 0.56
LIMS4-204ENST00000632897 NEUROD2Q15784 382 aa18.58■□□□□ 0.56
LIMS4-204ENST00000632897 RSPH6AQ9H0K4 717 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms