RNA–Protein interactions for RNA: ENST00000632331.1

LINC01090-203, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 466 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-203ENST00000632331 ZNF511Q8NB15 262 aa8.45□□□□□ -1.06
LINC01090-203ENST00000632331 SENP2Q9HC62 589 aa8.45□□□□□ -1.06
LINC01090-203ENST00000632331 AGERQ15109 404 aa8.44□□□□□ -1.06
LINC01090-203ENST00000632331 PRPF38BQ5VTL8 546 aaKnown RBP8.44□□□□□ -1.06
LINC01090-203ENST00000632331 ATP1B4Q9UN42 357 aaPredicted RBP8.44□□□□□ -1.06
LINC01090-203ENST00000632331 TLL2Q9Y6L7 1015 aa8.44□□□□□ -1.06
LINC01090-203ENST00000632331 CAPN5O15484 640 aaPredicted RBP8.43□□□□□ -1.06
LINC01090-203ENST00000632331 SNRPBP14678 240 aaKnown RBP8.43□□□□□ -1.06
LINC01090-203ENST00000632331 MYSM1Q5VVJ2 828 aa8.43□□□□□ -1.06
LINC01090-203ENST00000632331 TREML4Q6UXN2 200 aa8.43□□□□□ -1.06
LINC01090-203ENST00000632331 MAP10Q9P2G4 905 aa8.43□□□□□ -1.06
LINC01090-203ENST00000632331 LIMD1Q9UGP4 676 aa8.43□□□□□ -1.06
LINC01090-203ENST00000632331 PLEKHG3A1L390 1219 aa8.42□□□□□ -1.06
LINC01090-203ENST00000632331 VARSP26640 1264 aaKnown RBP8.42□□□□□ -1.06
LINC01090-203ENST00000632331 ARID5BQ14865 1188 aa8.41□□□□□ -1.06
LINC01090-203ENST00000632331 QPCTQ16769 361 aa8.41□□□□□ -1.06
LINC01090-203ENST00000632331 TRIM47Q96LD4 638 aa8.41□□□□□ -1.06
LINC01090-203ENST00000632331 POLR3EQ9NVU0 708 aa8.41□□□□□ -1.06
LINC01090-203ENST00000632331 PER1O15534 1290 aaPredicted RBP8.4□□□□□ -1.06
LINC01090-203ENST00000632331 WFS1O76024 890 aa8.4□□□□□ -1.06
LINC01090-203ENST00000632331 BMP1P13497 986 aa8.4□□□□□ -1.06
LINC01090-203ENST00000632331 FAM174AQ8TBP5 190 aa8.4□□□□□ -1.06
LINC01090-203ENST00000632331 KIFC2Q96AC6 838 aa8.4□□□□□ -1.06
LINC01090-203ENST00000632331 FOXJ1Q92949 421 aa8.39□□□□□ -1.07
LINC01090-203ENST00000632331 RSPH6AQ9H0K4 717 aa8.39□□□□□ -1.07
LINC01090-203ENST00000632331 CLK2P49760 499 aaKnown RBP8.38□□□□□ -1.07
LINC01090-203ENST00000632331 NNTQ13423 1086 aa8.38□□□□□ -1.07
LINC01090-203ENST00000632331 HELBQ8NG08 1087 aaPredicted RBP8.38□□□□□ -1.07
LINC01090-203ENST00000632331 LILRB3O75022 631 aa8.37□□□□□ -1.07
LINC01090-203ENST00000632331 RTL5Q5HYW3 569 aaPredicted RBP8.37□□□□□ -1.07
LINC01090-203ENST00000632331 F12P00748 615 aaPredicted RBP8.36□□□□□ -1.07
LINC01090-203ENST00000632331 BPHLQ86WA6 291 aaPredicted RBP8.35□□□□□ -1.07
LINC01090-203ENST00000632331 WDR4P57081 412 aaKnown RBP8.34□□□□□ -1.07
LINC01090-203ENST00000632331 TUSC1Q2TAM9 212 aa8.34□□□□□ -1.07
LINC01090-203ENST00000632331 TRIM46Q7Z4K8 759 aa8.34□□□□□ -1.07
LINC01090-203ENST00000632331 ARMC2Q8NEN0 867 aa8.34□□□□□ -1.07
LINC01090-203ENST00000632331 BCANQ96GW7 911 aa8.34□□□□□ -1.07
LINC01090-203ENST00000632331 TERTO14746 1132 aaKnown RBP8.33□□□□□ -1.08
LINC01090-203ENST00000632331 ADH1CP00326 375 aa8.33□□□□□ -1.08
LINC01090-203ENST00000632331 NFX1Q12986 1120 aaKnown RBP8.33□□□□□ -1.08
LINC01090-203ENST00000632331 MPNDQ8N594 471 aa8.33□□□□□ -1.08
LINC01090-203ENST00000632331 MAGEB6P1A0A0J9YX57 407 aa8.32□□□□□ -1.08
LINC01090-203ENST00000632331 LCE2AQ5TA79 106 aaPredicted RBP8.32□□□□□ -1.08
LINC01090-203ENST00000632331 ZFP42Q96MM3 310 aa8.32□□□□□ -1.08
LINC01090-203ENST00000632331 GPBP1L1Q9HC44 474 aaPredicted RBP8.32□□□□□ -1.08
LINC01090-203ENST00000632331 SCARF1Q14162 830 aa8.31□□□□□ -1.08
LINC01090-203ENST00000632331 NBPF14Q5TI25 921 aa8.31□□□□□ -1.08
LINC01090-203ENST00000632331 KDM4CQ9H3R0 1056 aa8.31□□□□□ -1.08
LINC01090-203ENST00000632331 TIMP2P16035 220 aa8.3□□□□□ -1.08
LINC01090-203ENST00000632331 CTDSPL2Q05D32 466 aa8.3□□□□□ -1.08
LINC01090-203ENST00000632331 C4orf48Q5BLP8 95 aa8.3□□□□□ -1.08
LINC01090-203ENST00000632331 SLC16A10Q8TF71 515 aa8.3□□□□□ -1.08
LINC01090-203ENST00000632331 CDK15Q96Q40 435 aa8.3□□□□□ -1.08
LINC01090-203ENST00000632331 PURBQ96QR8 312 aaKnown RBP8.3□□□□□ -1.08
LINC01090-203ENST00000632331 CARD14Q9BXL6 1004 aa8.3□□□□□ -1.08
LINC01090-203ENST00000632331 ZIC2O95409 532 aaPredicted RBP8.29□□□□□ -1.08
LINC01090-203ENST00000632331 NR5A1Q13285 461 aa8.29□□□□□ -1.08
LINC01090-203ENST00000632331 MRPL14Q6P1L8 145 aaKnown RBP8.29□□□□□ -1.08
LINC01090-203ENST00000632331 VEGFBP49765 207 aa8.28□□□□□ -1.08
LINC01090-203ENST00000632331 SKIV2LQ15477 1246 aaKnown RBP8.28□□□□□ -1.08
LINC01090-203ENST00000632331 VASH1Q7L8A9 365 aaPredicted RBP8.28□□□□□ -1.08
LINC01090-203ENST00000632331 FAM117AQ9C073 453 aa8.28□□□□□ -1.08
LINC01090-203ENST00000632331 ZFAND3Q9H8U3 227 aa8.28□□□□□ -1.08
LINC01090-203ENST00000632331 NXF1Q9UBU9 619 aaKnown RBP8.28□□□□□ -1.08
LINC01090-203ENST00000632331 NR3C2P08235 984 aa8.27□□□□□ -1.09
LINC01090-203ENST00000632331 C6orf118Q5T5N4 469 aa8.27□□□□□ -1.09
LINC01090-203ENST00000632331 PROCA1Q8NCQ7 364 aaPredicted RBP8.27□□□□□ -1.09
LINC01090-203ENST00000632331 ITPKCQ96DU7 683 aa8.27□□□□□ -1.09
LINC01090-203ENST00000632331 DDRGK1Q96HY6 314 aa8.27□□□□□ -1.09
LINC01090-203ENST00000632331 UPP2O95045 317 aa8.26□□□□□ -1.09
LINC01090-203ENST00000632331 FSHRP23945 695 aa8.26□□□□□ -1.09
LINC01090-203ENST00000632331 GRM5P41594 1212 aa8.26□□□□□ -1.09
LINC01090-203ENST00000632331 LRRN4Q8WUT4 740 aa8.26□□□□□ -1.09
LINC01090-203ENST00000632331 KLF16Q9BXK1 252 aaPredicted RBP8.25□□□□□ -1.09
LINC01090-203ENST00000632331 SOBPA7XYQ1 873 aa8.24□□□□□ -1.09
LINC01090-203ENST00000632331 AP1G2O75843 785 aa8.24□□□□□ -1.09
LINC01090-203ENST00000632331 BMP2P12643 396 aa8.24□□□□□ -1.09
LINC01090-203ENST00000632331 INSM1Q01101 510 aaPredicted RBP8.24□□□□□ -1.09
LINC01090-203ENST00000632331 SH3D19Q5HYK7 790 aa8.24□□□□□ -1.09
LINC01090-203ENST00000632331 SH3BP5LQ7L8J4 393 aa8.24□□□□□ -1.09
LINC01090-203ENST00000632331 ARHGAP9Q9BRR9 750 aa8.24□□□□□ -1.09
LINC01090-203ENST00000632331 MAN1A2O60476 641 aa8.23□□□□□ -1.09
LINC01090-203ENST00000632331 SLC24A1O60721 1099 aa8.23□□□□□ -1.09
LINC01090-203ENST00000632331 NR6A1Q15406 480 aa8.23□□□□□ -1.09
LINC01090-203ENST00000632331 SH3RF1Q7Z6J0 888 aa8.23□□□□□ -1.09
LINC01090-203ENST00000632331 GPKOWQ92917 476 aaPredicted RBP eCLIP8.23□□□□□ -1.092e-9■■■■■ 29.7
LINC01090-203ENST00000632331 WIPF1O43516 503 aa8.22□□□□□ -1.09
LINC01090-203ENST00000632331 ZBTB33Q86T24 672 aa8.22□□□□□ -1.09
LINC01090-203ENST00000632331 IRF7Q92985 503 aa8.22□□□□□ -1.09
LINC01090-203ENST00000632331 C1QTNF2Q9BXJ5 285 aa8.22□□□□□ -1.09
LINC01090-203ENST00000632331 FKBPLQ9UIM3 349 aa8.22□□□□□ -1.09
LINC01090-203ENST00000632331 ERFEQ4G0M1 354 aa8.21□□□□□ -1.1
LINC01090-203ENST00000632331 LCE2CQ5TA81 110 aa8.21□□□□□ -1.1
LINC01090-203ENST00000632331 FBXO31Q5XUX0 539 aaPredicted RBP8.2□□□□□ -1.1
LINC01090-203ENST00000632331 PDXDC2PQ6P474 469 aa8.2□□□□□ -1.1
LINC01090-203ENST00000632331 TRMT44Q8IYL2 757 aaKnown RBP8.2□□□□□ -1.1
LINC01090-203ENST00000632331 CCDC116Q8IYX3 515 aa8.2□□□□□ -1.1
LINC01090-203ENST00000632331 SLC10A4Q96EP9 437 aa8.2□□□□□ -1.1
LINC01090-203ENST00000632331 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.2□□□□□ -1.1
LINC01090-203ENST00000632331 MAP4K5Q9Y4K4 846 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms