RNA–Protein interactions for RNA: ENST00000629913.2

TREX1-206, Transcript of three prime repair exonuclease 1, humanhuman

APPRIS P1 BASIC

Gene TREX1, Length 945 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-206ENST00000629913 ROCK2O75116 1388 aaKnown RBP19.65■□□□□ 0.74
TREX1-206ENST00000629913 PLEKHG3A1L390 1219 aa19.64■□□□□ 0.73
TREX1-206ENST00000629913 RALGAPBQ86X10 1494 aa19.64■□□□□ 0.73
TREX1-206ENST00000629913 GLI3P10071 1580 aa19.64■□□□□ 0.73
TREX1-206ENST00000629913 ACEP12821 1306 aa19.63■□□□□ 0.73
TREX1-206ENST00000629913 PAK3O75914 559 aaPredicted RBP19.63■□□□□ 0.73
TREX1-206ENST00000629913 SRPK2P78362 688 aaKnown RBP19.62■□□□□ 0.73
TREX1-206ENST00000629913 PPIP5K1Q6PFW1 1433 aa19.61■□□□□ 0.73
TREX1-206ENST00000629913 FAM83GA6ND36 823 aa19.61■□□□□ 0.73
TREX1-206ENST00000629913 NBPF8Q3BBV2 869 aa19.61■□□□□ 0.73
TREX1-206ENST00000629913 CABP2Q9NPB3 220 aa19.61■□□□□ 0.73
TREX1-206ENST00000629913 NRAPQ86VF7 1730 aa19.61■□□□□ 0.73
TREX1-206ENST00000629913 COL14A1Q05707 1796 aaKnown RBP19.6■□□□□ 0.73
TREX1-206ENST00000629913 ATAD2Q6PL18 1390 aa19.6■□□□□ 0.73
TREX1-206ENST00000629913 EP400Q96L91 3159 aa19.6■□□□□ 0.73
TREX1-206ENST00000629913 PHRF1Q9P1Y6 1649 aaKnown RBP19.59■□□□□ 0.73
TREX1-206ENST00000629913 VPS72Q15906 364 aa19.59■□□□□ 0.73
TREX1-206ENST00000629913 TONSLQ96HA7 1378 aa19.58■□□□□ 0.73
TREX1-206ENST00000629913 EVC2Q86UK5 1308 aa19.56■□□□□ 0.72
TREX1-206ENST00000629913 NRKQ7Z2Y5 1582 aa19.54■□□□□ 0.72
TREX1-206ENST00000629913 BTG4Q9NY30 223 aa19.54■□□□□ 0.72
TREX1-206ENST00000629913 NUTM2GQ5VZR2 741 aa19.53■□□□□ 0.72
TREX1-206ENST00000629913 PRDM11Q9NQV5 511 aa19.53■□□□□ 0.72
TREX1-206ENST00000629913 BRD4O60885 1362 aaPredicted RBP19.53■□□□□ 0.72
TREX1-206ENST00000629913 KIAA0232Q92628 1395 aa19.53■□□□□ 0.72
TREX1-206ENST00000629913 SBNO2Q9Y2G9 1366 aa19.53■□□□□ 0.72
TREX1-206ENST00000629913 USP6P35125 1406 aa19.52■□□□□ 0.72
TREX1-206ENST00000629913 ABTB2Q8N961 1025 aa19.52■□□□□ 0.72
TREX1-206ENST00000629913 CABP1Q9NZU7 370 aa19.52■□□□□ 0.72
TREX1-206ENST00000629913 CCDC9Q9Y3X0 531 aaKnown RBP19.52■□□□□ 0.72
TREX1-206ENST00000629913 USP19O94966 1318 aa19.51■□□□□ 0.71
TREX1-206ENST00000629913 ONECUT3O60422 494 aaPredicted RBP19.51■□□□□ 0.71
TREX1-206ENST00000629913 CARD11Q9BXL7 1154 aa19.51■□□□□ 0.71
TREX1-206ENST00000629913 BRWD3Q6RI45 1802 aa19.5■□□□□ 0.71
TREX1-206ENST00000629913 SSH2Q76I76 1423 aa19.5■□□□□ 0.71
TREX1-206ENST00000629913 SEPT12Q8IYM1 358 aa19.49■□□□□ 0.71
TREX1-206ENST00000629913 CPDO75976 1380 aa19.47■□□□□ 0.71
TREX1-206ENST00000629913 ZC3H6P61129 1189 aaKnown RBP19.47■□□□□ 0.71
TREX1-206ENST00000629913 CHRNA2Q15822 529 aa19.47■□□□□ 0.71
TREX1-206ENST00000629913 SPATA31A5Q5VU36 1347 aa19.47■□□□□ 0.71
TREX1-206ENST00000629913 SPATA31A7Q8IWB4 1347 aa19.47■□□□□ 0.71
TREX1-206ENST00000629913 NLRP13Q86W25 1043 aa19.46■□□□□ 0.71
TREX1-206ENST00000629913 AKAP12Q02952 1782 aa19.46■□□□□ 0.71
TREX1-206ENST00000629913 PIK3C2AO00443 1686 aa19.46■□□□□ 0.71
TREX1-206ENST00000629913 LMO7Q8WWI1 1683 aa19.46■□□□□ 0.71
TREX1-206ENST00000629913 SLIT3O75094 1523 aa19.45■□□□□ 0.7
TREX1-206ENST00000629913 THSD7AQ9UPZ6 1657 aa19.44■□□□□ 0.7
TREX1-206ENST00000629913 FAM98CQ17RN3 349 aaKnown RBP19.44■□□□□ 0.7
TREX1-206ENST00000629913 CCDC125Q86Z20 511 aa19.44■□□□□ 0.7
TREX1-206ENST00000629913 CPSF1Q10570 1443 aaKnown RBP19.43■□□□□ 0.7
TREX1-206ENST00000629913 GCP02774 474 aa19.43■□□□□ 0.7
TREX1-206ENST00000629913 CAMTA1Q9Y6Y1 1673 aa19.43■□□□□ 0.7
TREX1-206ENST00000629913 KRT27Q7Z3Y8 459 aa19.42■□□□□ 0.7
TREX1-206ENST00000629913 ZNF692Q9BU19 519 aaPredicted RBP19.42■□□□□ 0.7
TREX1-206ENST00000629913 SPATA31A1Q5TZJ5 1347 aa19.42■□□□□ 0.7
TREX1-206ENST00000629913 BLMP54132 1417 aaPredicted RBP19.42■□□□□ 0.7
TREX1-206ENST00000629913 A0A0G2JS52 829 aa19.41■□□□□ 0.7
TREX1-206ENST00000629913 NLRP6P59044 892 aa19.41■□□□□ 0.7
TREX1-206ENST00000629913 MYT1Q01538 1121 aa19.41■□□□□ 0.7
TREX1-206ENST00000629913 MON2Q7Z3U7 1717 aa19.4■□□□□ 0.7
TREX1-206ENST00000629913 STRN4Q9NRL3 753 aa19.4■□□□□ 0.7
TREX1-206ENST00000629913 TTC21BQ7Z4L5 1316 aa19.4■□□□□ 0.7
TREX1-206ENST00000629913 KTN1Q86UP2 1357 aaKnown RBP19.38■□□□□ 0.69
TREX1-206ENST00000629913 TTC21AQ8NDW8 1320 aa19.38■□□□□ 0.69
TREX1-206ENST00000629913 CD163L1Q9NR16 1453 aa19.38■□□□□ 0.69
TREX1-206ENST00000629913 COL5A2P05997 1499 aaPredicted RBP19.37■□□□□ 0.69
TREX1-206ENST00000629913 EVA1CP58658 441 aa19.36■□□□□ 0.69
TREX1-206ENST00000629913 TESK2Q96S53 571 aa19.36■□□□□ 0.69
TREX1-206ENST00000629913 AATKQ6ZMQ8 1374 aa19.35■□□□□ 0.69
TREX1-206ENST00000629913 LARP1Q6PKG0 1096 aaKnown RBP19.35■□□□□ 0.69
TREX1-206ENST00000629913 PUS7Q96PZ0 661 aaKnown RBP19.35■□□□□ 0.69
TREX1-206ENST00000629913 COL18A1P39060 1754 aa19.34■□□□□ 0.69
TREX1-206ENST00000629913 USP54Q70EL1 1684 aa19.33■□□□□ 0.69
TREX1-206ENST00000629913 CLSPNQ9HAW4 1339 aa19.33■□□□□ 0.69
TREX1-206ENST00000629913 ST20-MTHFSA0A0A6YYL1 179 aa19.33■□□□□ 0.68
TREX1-206ENST00000629913 BARGINQ6ZT62 677 aa19.33■□□□□ 0.68
TREX1-206ENST00000629913 USP35Q9P2H5 1018 aa19.33■□□□□ 0.68
TREX1-206ENST00000629913 NFAT5O94916 1531 aa19.33■□□□□ 0.68
TREX1-206ENST00000629913 KCNH5Q8NCM2 988 aa19.32■□□□□ 0.68
TREX1-206ENST00000629913 TMC1Q8TDI8 760 aa19.32■□□□□ 0.68
TREX1-206ENST00000629913 ZBTB7CA1YPR0 619 aa19.31■□□□□ 0.68
TREX1-206ENST00000629913 TCP11L2Q8N4U5 519 aa19.31■□□□□ 0.68
TREX1-206ENST00000629913 SLC12A5Q9H2X9 1139 aa19.31■□□□□ 0.68
TREX1-206ENST00000629913 CRB1P82279 1406 aa19.31■□□□□ 0.68
TREX1-206ENST00000629913 A0A1W2PP64 1363 aa19.31■□□□□ 0.68
TREX1-206ENST00000629913 USP31Q70CQ4 1352 aa19.31■□□□□ 0.68
TREX1-206ENST00000629913 USP47Q96K76 1375 aa19.31■□□□□ 0.68
TREX1-206ENST00000629913 SF3B2Q13435 895 aaKnown RBP19.3■□□□□ 0.68
TREX1-206ENST00000629913 FAM182BQ5T319 152 aa19.3■□□□□ 0.68
TREX1-206ENST00000629913 HDGFL2Q7Z4V5 671 aaPredicted RBP19.3■□□□□ 0.68
TREX1-206ENST00000629913 DEFB132Q7Z7B7 95 aa19.3■□□□□ 0.68
TREX1-206ENST00000629913 ARHGEF25Q86VW2 580 aa19.3■□□□□ 0.68
TREX1-206ENST00000629913 EDC4Q6P2E9 1401 aaKnown RBP19.3■□□□□ 0.68
TREX1-206ENST00000629913 NINLQ9Y2I6 1382 aa19.3■□□□□ 0.68
TREX1-206ENST00000629913 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.29■□□□□ 0.68
TREX1-206ENST00000629913 THRAP3Q9Y2W1 955 aaKnown RBP19.29■□□□□ 0.68
TREX1-206ENST00000629913 RGPD1P0DJD0 1748 aa19.28■□□□□ 0.68
TREX1-206ENST00000629913 SRCAPQ6ZRS2 3230 aa19.28■□□□□ 0.68
TREX1-206ENST00000629913 SLC24A1O60721 1099 aa19.28■□□□□ 0.68
TREX1-206ENST00000629913 PCGF6Q9BYE7 350 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms