RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 PRR7Q8TB68 274 aa8.46□□□□□ -1.06
VPS8-228ENST00000628962 KLF16Q9BXK1 252 aaPredicted RBP8.46□□□□□ -1.06
VPS8-228ENST00000628962 SPDYE5A6NIY4 337 aa8.44□□□□□ -1.06
VPS8-228ENST00000628962 ADH1CP00326 375 aa8.44□□□□□ -1.06
VPS8-228ENST00000628962 VSIG8P0DPA2 414 aa8.44□□□□□ -1.06
VPS8-228ENST00000628962 WDR4P57081 412 aaKnown RBP8.44□□□□□ -1.06
VPS8-228ENST00000628962 MTMR2Q13614 643 aa8.44□□□□□ -1.06
VPS8-228ENST00000628962 SCARF1Q14162 830 aa8.44□□□□□ -1.06
VPS8-228ENST00000628962 PURBQ96QR8 312 aaKnown RBP8.44□□□□□ -1.06
VPS8-228ENST00000628962 SOBPA7XYQ1 873 aa8.42□□□□□ -1.06
VPS8-228ENST00000628962 CDK15Q96Q40 435 aa8.41□□□□□ -1.06
VPS8-228ENST00000628962 LOC100996750A0A140TA64 210 aa8.4□□□□□ -1.06
VPS8-228ENST00000628962 LYPD8Q6UX82 237 aa8.4□□□□□ -1.06
VPS8-228ENST00000628962 FAM174AQ8TBP5 190 aa8.4□□□□□ -1.06
VPS8-228ENST00000628962 KRTAP4-6Q9BYQ5 205 aa8.4□□□□□ -1.06
VPS8-228ENST00000628962 GJA5P36382 358 aa8.39□□□□□ -1.07
VPS8-228ENST00000628962 AMHR2Q16671 573 aa8.38□□□□□ -1.07
VPS8-228ENST00000628962 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.38□□□□□ -1.07
VPS8-228ENST00000628962 FOXJ1Q92949 421 aa8.38□□□□□ -1.07
VPS8-228ENST00000628962 F12P00748 615 aaPredicted RBP8.37□□□□□ -1.07
VPS8-228ENST00000628962 CTHP32929 405 aa8.37□□□□□ -1.07
VPS8-228ENST00000628962 TTLL12Q14166 644 aaPredicted RBP8.37□□□□□ -1.07
VPS8-228ENST00000628962 GIGYF2Q6Y7W6 1299 aaKnown RBP8.37□□□□□ -1.07
VPS8-228ENST00000628962 ZFAND3Q9H8U3 227 aa8.37□□□□□ -1.07
VPS8-228ENST00000628962 CFAP99D6REC4 459 aa8.36□□□□□ -1.07
VPS8-228ENST00000628962 ZIC2O95409 532 aaPredicted RBP8.36□□□□□ -1.07
VPS8-228ENST00000628962 ITPKCQ96DU7 683 aa8.36□□□□□ -1.07
VPS8-228ENST00000628962 NR3C2P08235 984 aa8.35□□□□□ -1.07
VPS8-228ENST00000628962 NR5A1Q13285 461 aa8.35□□□□□ -1.07
VPS8-228ENST00000628962 RSBN1LQ6PCB5 846 aaPredicted RBP8.35□□□□□ -1.07
VPS8-228ENST00000628962 BARGINQ6ZT62 677 aa8.35□□□□□ -1.07
VPS8-228ENST00000628962 BEGAINQ9BUH8 593 aa8.35□□□□□ -1.07
VPS8-228ENST00000628962 MAP10Q9P2G4 905 aa8.35□□□□□ -1.07
VPS8-228ENST00000628962 PCDHB15Q9Y5E8 787 aa8.35□□□□□ -1.07
VPS8-228ENST00000628962 MAN1A2O60476 641 aa8.34□□□□□ -1.07
VPS8-228ENST00000628962 GRM5P41594 1212 aa8.34□□□□□ -1.07
VPS8-228ENST00000628962 ARID5BQ14865 1188 aa8.34□□□□□ -1.07
VPS8-228ENST00000628962 C4orf48Q5BLP8 95 aa8.34□□□□□ -1.07
VPS8-228ENST00000628962 TBC1D2Q9BYX2 928 aa8.34□□□□□ -1.07
VPS8-228ENST00000628962 PPFIA3O75145 1194 aa8.33□□□□□ -1.08
VPS8-228ENST00000628962 HRCP23327 699 aa8.33□□□□□ -1.08
VPS8-228ENST00000628962 C6orf118Q5T5N4 469 aa8.33□□□□□ -1.08
VPS8-228ENST00000628962 VSIG10Q8N0Z9 540 aa8.33□□□□□ -1.08
VPS8-228ENST00000628962 SPTLC1O15269 473 aa8.32□□□□□ -1.08
VPS8-228ENST00000628962 ZMYND10O75800 440 aa8.32□□□□□ -1.08
VPS8-228ENST00000628962 KCNMA1Q12791 1236 aa8.32□□□□□ -1.08
VPS8-228ENST00000628962 DIXDC1Q155Q3 683 aa8.32□□□□□ -1.08
VPS8-228ENST00000628962 GSK3AP49840 483 aa8.31□□□□□ -1.08
VPS8-228ENST00000628962 LINC00528Q8N1L1 170 aa8.31□□□□□ -1.08
VPS8-228ENST00000628962 MEIOBQ8N635 442 aa8.31□□□□□ -1.08
VPS8-228ENST00000628962 ZBTB3Q9H5J0 574 aa8.31□□□□□ -1.08
VPS8-228ENST00000628962 PRPF38BQ5VTL8 546 aaKnown RBP8.3□□□□□ -1.08
VPS8-228ENST00000628962 BPHLQ86WA6 291 aaPredicted RBP8.3□□□□□ -1.08
VPS8-228ENST00000628962 SOS2Q07890 1332 aaPredicted RBP8.29□□□□□ -1.08
VPS8-228ENST00000628962 PER1O15534 1290 aaPredicted RBP8.29□□□□□ -1.08
VPS8-228ENST00000628962 BMP2P12643 396 aa8.29□□□□□ -1.08
VPS8-228ENST00000628962 C1QTNF2Q9BXJ5 285 aa8.29□□□□□ -1.08
VPS8-228ENST00000628962 DNMT3LQ9UJW3 386 aa8.29□□□□□ -1.08
VPS8-228ENST00000628962 UPP2O95045 317 aa8.28□□□□□ -1.08
VPS8-228ENST00000628962 AGERQ15109 404 aa8.28□□□□□ -1.08
VPS8-228ENST00000628962 SH3RF1Q7Z6J0 888 aa8.28□□□□□ -1.08
VPS8-228ENST00000628962 KRT76Q01546 638 aa8.27□□□□□ -1.09
VPS8-228ENST00000628962 SUZ12Q15022 739 aaKnown RBP8.27□□□□□ -1.09
VPS8-228ENST00000628962 PARP9Q8IXQ6 854 aa8.27□□□□□ -1.09
VPS8-228ENST00000628962 CABLES1Q8TDN4 633 aa8.27□□□□□ -1.09
VPS8-228ENST00000628962 MAP4K5Q9Y4K4 846 aa8.27□□□□□ -1.09
VPS8-228ENST00000628962 RIC3Q7Z5B4 369 aa8.26□□□□□ -1.09
VPS8-228ENST00000628962 ZC3H15Q8WU90 426 aaKnown RBP8.26□□□□□ -1.09
VPS8-228ENST00000628962 GPR161Q8N6U8 529 aaKnown RBP8.25□□□□□ -1.09
VPS8-228ENST00000628962 FSHRP23945 695 aa8.24□□□□□ -1.09
VPS8-228ENST00000628962 TRMT44Q8IYL2 757 aaKnown RBP8.24□□□□□ -1.09
VPS8-228ENST00000628962 KCTD17Q8N5Z5 321 aa8.24□□□□□ -1.09
VPS8-228ENST00000628962 ARMC2Q8NEN0 867 aa8.24□□□□□ -1.09
VPS8-228ENST00000628962 TSEN34Q9BSV6 310 aaKnown RBP8.24□□□□□ -1.09
VPS8-228ENST00000628962 SH3BP5LQ7L8J4 393 aa8.23□□□□□ -1.09
VPS8-228ENST00000628962 CSPP1Q1MSJ5 1256 aa8.22□□□□□ -1.09
VPS8-228ENST00000628962 TUSC1Q2TAM9 212 aa8.22□□□□□ -1.09
VPS8-228ENST00000628962 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.22□□□□□ -1.09
VPS8-228ENST00000628962 VASH1Q7L8A9 365 aaPredicted RBP8.22□□□□□ -1.09
VPS8-228ENST00000628962 EMILIN1Q9Y6C2 1016 aa8.22□□□□□ -1.09
VPS8-228ENST00000628962 TRIM66O15016 1216 aa8.21□□□□□ -1.1
VPS8-228ENST00000628962 QPCTQ16769 361 aa8.21□□□□□ -1.1
VPS8-228ENST00000628962 CCDC116Q8IYX3 515 aa8.21□□□□□ -1.1
VPS8-228ENST00000628962 CNTNAP3BQ96NU0 1288 aa8.21□□□□□ -1.1
VPS8-228ENST00000628962 CNTNAP3Q9BZ76 1288 aa8.21□□□□□ -1.1
VPS8-228ENST00000628962 LIMD1Q9UGP4 676 aa8.21□□□□□ -1.1
VPS8-228ENST00000628962 ADAMTS8Q9UP79 889 aa8.21□□□□□ -1.1
VPS8-228ENST00000628962 TTLL8A6PVC2 850 aa8.2□□□□□ -1.1
VPS8-228ENST00000628962 LILRB3O75022 631 aa8.2□□□□□ -1.1
VPS8-228ENST00000628962 RASSF7Q02833 373 aa8.2□□□□□ -1.1
VPS8-228ENST00000628962 PTSQ03393 145 aa8.2□□□□□ -1.1
VPS8-228ENST00000628962 NBPF14Q5TI25 921 aa8.2□□□□□ -1.1
VPS8-228ENST00000628962 TMEM151AQ8N4L1 468 aa8.2□□□□□ -1.1
VPS8-228ENST00000628962 NANOS1Q8WY41 292 aaKnown RBP8.2□□□□□ -1.1
VPS8-228ENST00000628962 TSC1Q92574 1164 aa8.2□□□□□ -1.1
VPS8-228ENST00000628962 MYSM1Q5VVJ2 828 aa8.19□□□□□ -1.1
VPS8-228ENST00000628962 MAGEB6P1A0A0J9YX57 407 aa8.18□□□□□ -1.1
VPS8-228ENST00000628962 NUTM2BA6NNL0 878 aaPredicted RBP8.18□□□□□ -1.1
VPS8-228ENST00000628962 NUTM2EB1AL46 878 aaPredicted RBP8.18□□□□□ -1.1
VPS8-228ENST00000628962 RNF225M0QZC1 329 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms