RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 TWISTNBQ3B726 338 aaPredicted RBP9.5□□□□□ -0.89
PKP4-217ENST00000628904 DDX17Q92841 729 aaKnown RBP9.49□□□□□ -0.89
PKP4-217ENST00000628904 TSPYL4Q9UJ04 414 aa9.49□□□□□ -0.89
PKP4-217ENST00000628904 ERVK-7P63135 1459 aa9.49□□□□□ -0.89
PKP4-217ENST00000628904 KCNA6P17658 529 aa9.49□□□□□ -0.89
PKP4-217ENST00000628904 PTPRTO14522 1441 aa9.49□□□□□ -0.89
PKP4-217ENST00000628904 ANXA1P04083 346 aa9.48□□□□□ -0.89
PKP4-217ENST00000628904 METP08581 1390 aa9.48□□□□□ -0.89
PKP4-217ENST00000628904 CLASP1Q7Z460 1538 aa9.48□□□□□ -0.89
PKP4-217ENST00000628904 CLTCL1P53675 1640 aa9.48□□□□□ -0.89
PKP4-217ENST00000628904 ATAD2Q6PL18 1390 aa9.48□□□□□ -0.89
PKP4-217ENST00000628904 SEC24BO95487 1268 aa9.48□□□□□ -0.89
PKP4-217ENST00000628904 HSPA2P54652 639 aa9.48□□□□□ -0.89
PKP4-217ENST00000628904 RIMS2Q9UQ26 1411 aa9.47□□□□□ -0.89
PKP4-217ENST00000628904 THEMISQ8N1K5 641 aaPredicted RBP9.47□□□□□ -0.89
PKP4-217ENST00000628904 CROCC2H7BZ55 1655 aa9.47□□□□□ -0.89
PKP4-217ENST00000628904 SLC4A2P04920 1241 aa9.47□□□□□ -0.89
PKP4-217ENST00000628904 YTHDC2Q9H6S0 1430 aaKnown RBP9.47□□□□□ -0.89
PKP4-217ENST00000628904 AIMP1Q12904 312 aaKnown RBP9.47□□□□□ -0.89
PKP4-217ENST00000628904 FKBP5Q13451 457 aaPredicted RBP9.47□□□□□ -0.89
PKP4-217ENST00000628904 FOXD4L5Q5VV16 416 aaPredicted RBP9.47□□□□□ -0.89
PKP4-217ENST00000628904 ATF7IPQ6VMQ6 1270 aa9.47□□□□□ -0.89
PKP4-217ENST00000628904 C8orf58Q8NAV2 365 aa9.47□□□□□ -0.89
PKP4-217ENST00000628904 FOXD4L4Q8WXT5 416 aaPredicted RBP9.47□□□□□ -0.89
PKP4-217ENST00000628904 ANKRD36BQ8N2N9 1353 aa9.46□□□□□ -0.89
PKP4-217ENST00000628904 OS9Q13438 667 aaPredicted RBP9.46□□□□□ -0.9
PKP4-217ENST00000628904 PROSER2Q86WR7 435 aaPredicted RBP9.46□□□□□ -0.9
PKP4-217ENST00000628904 FOXD4L6Q3SYB3 417 aaPredicted RBP9.45□□□□□ -0.9
PKP4-217ENST00000628904 FOXD4L3Q6VB84 417 aaPredicted RBP9.45□□□□□ -0.9
PKP4-217ENST00000628904 CABLES1Q8TDN4 633 aa9.45□□□□□ -0.9
PKP4-217ENST00000628904 DDRGK1Q96HY6 314 aa9.45□□□□□ -0.9
PKP4-217ENST00000628904 MBIPQ9NS73 344 aa9.45□□□□□ -0.9
PKP4-217ENST00000628904 TRIM35Q9UPQ4 493 aa9.45□□□□□ -0.9
PKP4-217ENST00000628904 MVPQ14764 893 aaKnown RBP9.45□□□□□ -0.9
PKP4-217ENST00000628904 WDR63Q8IWG1 891 aa9.45□□□□□ -0.9
PKP4-217ENST00000628904 NKTRP30414 1462 aaKnown RBP9.45□□□□□ -0.9
PKP4-217ENST00000628904 PPIP5K1Q6PFW1 1433 aa9.45□□□□□ -0.9
PKP4-217ENST00000628904 TSHZ3Q63HK5 1081 aa9.45□□□□□ -0.9
PKP4-217ENST00000628904 STK31Q9BXU1 1019 aa9.45□□□□□ -0.9
PKP4-217ENST00000628904 TNRQ92752 1358 aa9.45□□□□□ -0.9
PKP4-217ENST00000628904 SMARCA5O60264 1052 aaPredicted RBP9.44□□□□□ -0.9
PKP4-217ENST00000628904 FCHSD2O94868 740 aa9.44□□□□□ -0.9
PKP4-217ENST00000628904 NFE2L2Q16236 605 aa9.44□□□□□ -0.9
PKP4-217ENST00000628904 LRRC59Q96AG4 307 aaKnown RBP9.44□□□□□ -0.9
PKP4-217ENST00000628904 NLRP2Q9NX02 1062 aa9.44□□□□□ -0.9
PKP4-217ENST00000628904 DDX19BQ9UMR2 479 aa9.44□□□□□ -0.9
PKP4-217ENST00000628904 E9PCH4 1651 aa9.44□□□□□ -0.9
PKP4-217ENST00000628904 GNAI1P63096 354 aa9.44□□□□□ -0.9
PKP4-217ENST00000628904 EIF4A2Q14240 407 aaKnown RBP9.44□□□□□ -0.9
PKP4-217ENST00000628904 PIP4K2AP48426 406 aaPredicted RBP9.43□□□□□ -0.9
PKP4-217ENST00000628904 PDE3AQ14432 1141 aa9.43□□□□□ -0.9
PKP4-217ENST00000628904 TRPM2O94759 1503 aa9.43□□□□□ -0.9
PKP4-217ENST00000628904 TRIM6-TRIM34B2RNG4 842 aa9.43□□□□□ -0.9
PKP4-217ENST00000628904 BECN1Q14457 450 aa9.42□□□□□ -0.9
PKP4-217ENST00000628904 CHRNA2Q15822 529 aa9.42□□□□□ -0.9
PKP4-217ENST00000628904 MPRIPQ6WCQ1 1025 aa9.42□□□□□ -0.9
PKP4-217ENST00000628904 ORAI2Q96SN7 254 aa9.42□□□□□ -0.9
PKP4-217ENST00000628904 TRPM1Q7Z4N2 1603 aa9.42□□□□□ -0.9
PKP4-217ENST00000628904 MS4A1P11836 297 aa9.42□□□□□ -0.9
PKP4-217ENST00000628904 NCLP19338 710 aaKnown RBP9.42□□□□□ -0.9
PKP4-217ENST00000628904 TEFQ10587 303 aa9.42□□□□□ -0.9
PKP4-217ENST00000628904 TTC21BQ7Z4L5 1316 aa9.42□□□□□ -0.9
PKP4-217ENST00000628904 ANKLE2Q86XL3 938 aa9.42□□□□□ -0.9
PKP4-217ENST00000628904 RILPL2Q969X0 211 aa9.42□□□□□ -0.9
PKP4-217ENST00000628904 RNF123Q5XPI4 1314 aa9.42□□□□□ -0.9
PKP4-217ENST00000628904 PRR36Q9H6K5 1346 aa9.42□□□□□ -0.9
PKP4-217ENST00000628904 IQGAP3Q86VI3 1631 aa9.41□□□□□ -0.9
PKP4-217ENST00000628904 MAP4K4O95819 1239 aaPredicted RBP9.41□□□□□ -0.9
PKP4-217ENST00000628904 HSP90AB1P08238 724 aaKnown RBP9.41□□□□□ -0.9
PKP4-217ENST00000628904 CALD1Q05682 793 aaKnown RBP9.41□□□□□ -0.9
PKP4-217ENST00000628904 ZNF692Q9BU19 519 aaPredicted RBP9.41□□□□□ -0.9
PKP4-217ENST00000628904 PIK3C2GO75747 1445 aa9.41□□□□□ -0.9
PKP4-217ENST00000628904 FRAT2O75474 233 aaPredicted RBP9.41□□□□□ -0.9
PKP4-217ENST00000628904 JARID2Q92833 1246 aaPredicted RBP9.41□□□□□ -0.9
PKP4-217ENST00000628904 SHROOM2Q13796 1616 aa9.4□□□□□ -0.9
PKP4-217ENST00000628904 C16orf71Q8IYS4 520 aaPredicted RBP9.4□□□□□ -0.9
PKP4-217ENST00000628904 EXOC6BQ9Y2D4 811 aa9.4□□□□□ -0.9
PKP4-217ENST00000628904 POLR3AO14802 1390 aaPredicted RBP9.4□□□□□ -0.9
PKP4-217ENST00000628904 RSPH6AQ9H0K4 717 aa9.4□□□□□ -0.9
PKP4-217ENST00000628904 CHMP3Q9Y3E7 222 aa9.4□□□□□ -0.9
PKP4-217ENST00000628904 LMOD3Q0VAK6 560 aa9.4□□□□□ -0.91
PKP4-217ENST00000628904 EIF2AK4Q9P2K8 1649 aaKnown RBP9.39□□□□□ -0.91
PKP4-217ENST00000628904 MLH3Q9UHC1 1453 aa9.39□□□□□ -0.91
PKP4-217ENST00000628904 MAP3K19Q56UN5 1328 aa9.39□□□□□ -0.91
PKP4-217ENST00000628904 MTHFSDQ2M296 383 aaKnown RBP9.39□□□□□ -0.91
PKP4-217ENST00000628904 STRN4Q9NRL3 753 aa9.39□□□□□ -0.91
PKP4-217ENST00000628904 DTNBO60941 627 aa9.39□□□□□ -0.91
PKP4-217ENST00000628904 IL1RAPL2Q9NP60 686 aa9.39□□□□□ -0.91
PKP4-217ENST00000628904 ZNF521Q96K83 1311 aa9.39□□□□□ -0.91
PKP4-217ENST00000628904 KIF16BQ96L93 1317 aa9.39□□□□□ -0.91
PKP4-217ENST00000628904 PLXNC1O60486 1568 aa9.39□□□□□ -0.91
PKP4-217ENST00000628904 ABCC3O15438 1527 aa9.39□□□□□ -0.91
PKP4-217ENST00000628904 ROBO2Q9HCK4 1378 aa9.38□□□□□ -0.91
PKP4-217ENST00000628904 PHF8Q9UPP1 1060 aa9.38□□□□□ -0.91
PKP4-217ENST00000628904 UNC13BO14795 1591 aa9.38□□□□□ -0.91
PKP4-217ENST00000628904 CEP152O94986 1710 aa9.38□□□□□ -0.91
PKP4-217ENST00000628904 MYL6BP14649 208 aa9.38□□□□□ -0.91
PKP4-217ENST00000628904 C8orf34Q49A92 452 aa9.38□□□□□ -0.91
PKP4-217ENST00000628904 G2E3Q7L622 706 aa9.38□□□□□ -0.91
PKP4-217ENST00000628904 SYTL4Q96C24 671 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms