RNA–Protein interactions for RNA: ENST00000628090.1

LINC01943-202, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 5 BASIC

Gene LINC01943, Length 926 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-202ENST00000628090 FNBP4Q8N3X1 1017 aaPredicted RBP13.8□□□□□ -0.2
LINC01943-202ENST00000628090 KNDC1Q76NI1 1749 aa13.8□□□□□ -0.2
LINC01943-202ENST00000628090 EVC2Q86UK5 1308 aa13.8□□□□□ -0.2
LINC01943-202ENST00000628090 PUS7Q96PZ0 661 aaKnown RBP13.79□□□□□ -0.2
LINC01943-202ENST00000628090 RGS12O14924 1447 aa13.79□□□□□ -0.2
LINC01943-202ENST00000628090 EP400Q96L91 3159 aa13.79□□□□□ -0.2
LINC01943-202ENST00000628090 FMN2Q9NZ56 1722 aa13.78□□□□□ -0.2
LINC01943-202ENST00000628090 PLEKHG5O94827 1062 aa13.78□□□□□ -0.2
LINC01943-202ENST00000628090 YTHDC1Q96MU7 727 aaKnown RBP13.78□□□□□ -0.2
LINC01943-202ENST00000628090 PHF8Q9UPP1 1060 aa13.78□□□□□ -0.2
LINC01943-202ENST00000628090 SPATA31A3Q5VYP0 1347 aa13.78□□□□□ -0.2
LINC01943-202ENST00000628090 CDK12Q9NYV4 1490 aaPredicted RBP13.78□□□□□ -0.2
LINC01943-202ENST00000628090 RGPD8O14715 1765 aaPredicted RBP13.78□□□□□ -0.2
LINC01943-202ENST00000628090 RALBP1Q15311 655 aa13.77□□□□□ -0.21
LINC01943-202ENST00000628090 COL22A1Q8NFW1 1626 aaPredicted RBP13.77□□□□□ -0.21
LINC01943-202ENST00000628090 CABLES1Q8TDN4 633 aa13.77□□□□□ -0.21
LINC01943-202ENST00000628090 PRKRIP1Q9H875 184 aaPredicted RBP13.77□□□□□ -0.21
LINC01943-202ENST00000628090 DLC1Q96QB1 1528 aa13.76□□□□□ -0.21
LINC01943-202ENST00000628090 PMFBP1Q8TBY8 1022 aa13.76□□□□□ -0.21
LINC01943-202ENST00000628090 TRPC5Q9UL62 973 aaPredicted RBP13.76□□□□□ -0.21
LINC01943-202ENST00000628090 KNSTRNQ9Y448 316 aa13.76□□□□□ -0.21
LINC01943-202ENST00000628090 BCL9LQ86UU0 1499 aa13.75□□□□□ -0.21
LINC01943-202ENST00000628090 MINK1Q8N4C8 1332 aaPredicted RBP13.75□□□□□ -0.21
LINC01943-202ENST00000628090 ATRNO75882 1429 aa13.74□□□□□ -0.21
LINC01943-202ENST00000628090 PANK3Q9H999 370 aa13.74□□□□□ -0.21
LINC01943-202ENST00000628090 NINLQ9Y2I6 1382 aa13.73□□□□□ -0.21
LINC01943-202ENST00000628090 PSME1Q06323 249 aa13.73□□□□□ -0.21
LINC01943-202ENST00000628090 PRR36Q9H6K5 1346 aa13.72□□□□□ -0.21
LINC01943-202ENST00000628090 LMOD2Q6P5Q4 547 aa13.72□□□□□ -0.21
LINC01943-202ENST00000628090 USP32Q8NFA0 1604 aa13.72□□□□□ -0.21
LINC01943-202ENST00000628090 SRPK2P78362 688 aaKnown RBP13.71□□□□□ -0.21
LINC01943-202ENST00000628090 GJD4Q96KN9 370 aaPredicted RBP13.71□□□□□ -0.21
LINC01943-202ENST00000628090 ATAD2Q6PL18 1390 aa13.71□□□□□ -0.22
LINC01943-202ENST00000628090 MYOM1P52179 1685 aa13.7□□□□□ -0.22
LINC01943-202ENST00000628090 KIF1AQ12756 1690 aa13.7□□□□□ -0.22
LINC01943-202ENST00000628090 WASLO00401 505 aaPredicted RBP13.7□□□□□ -0.22
LINC01943-202ENST00000628090 TMC1Q8TDI8 760 aa13.7□□□□□ -0.22
LINC01943-202ENST00000628090 MRS2Q9HD23 443 aa13.7□□□□□ -0.22
LINC01943-202ENST00000628090 MARF1Q9Y4F3 1742 aaKnown RBP13.7□□□□□ -0.22
LINC01943-202ENST00000628090 MYBBP1AQ9BQG0 1328 aaKnown RBP13.69□□□□□ -0.22
LINC01943-202ENST00000628090 UNC5CLQ8IV45 518 aa13.69□□□□□ -0.22
LINC01943-202ENST00000628090 TNS3Q68CZ2 1445 aa13.69□□□□□ -0.22
LINC01943-202ENST00000628090 FAM83GA6ND36 823 aa13.68□□□□□ -0.22
LINC01943-202ENST00000628090 CNGB1Q14028 1251 aaPredicted RBP13.68□□□□□ -0.22
LINC01943-202ENST00000628090 SLIT2O94813 1529 aa13.68□□□□□ -0.22
LINC01943-202ENST00000628090 SBNO1A3KN83 1393 aa13.68□□□□□ -0.22
LINC01943-202ENST00000628090 ANKARQ7Z5J8 1434 aa13.67□□□□□ -0.22
LINC01943-202ENST00000628090 HAP1P54257 671 aaPredicted RBP13.67□□□□□ -0.22
LINC01943-202ENST00000628090 TERF2IPQ9NYB0 399 aa13.67□□□□□ -0.22
LINC01943-202ENST00000628090 BRD4O60885 1362 aaPredicted RBP13.66□□□□□ -0.22
LINC01943-202ENST00000628090 NPC1L1Q9UHC9 1359 aa13.66□□□□□ -0.22
LINC01943-202ENST00000628090 ADGRB2O60241 1585 aa13.66□□□□□ -0.22
LINC01943-202ENST00000628090 PER1O15534 1290 aaPredicted RBP13.65□□□□□ -0.22
LINC01943-202ENST00000628090 HDGFL2Q7Z4V5 671 aaPredicted RBP13.65□□□□□ -0.22
LINC01943-202ENST00000628090 NLRP13Q86W25 1043 aa13.65□□□□□ -0.22
LINC01943-202ENST00000628090 NUDT16Q96DE0 195 aaKnown RBP13.65□□□□□ -0.22
LINC01943-202ENST00000628090 U3KPZ7 1027 aaPredicted RBP13.65□□□□□ -0.22
LINC01943-202ENST00000628090 TULP4Q9NRJ4 1543 aa13.64□□□□□ -0.23
LINC01943-202ENST00000628090 GLI3P10071 1580 aa13.64□□□□□ -0.23
LINC01943-202ENST00000628090 CC2D1BQ5T0F9 858 aaKnown RBP13.64□□□□□ -0.23
LINC01943-202ENST00000628090 NGDNQ8NEJ9 315 aaKnown RBP13.64□□□□□ -0.23
LINC01943-202ENST00000628090 CDK19Q9BWU1 502 aa13.64□□□□□ -0.23
LINC01943-202ENST00000628090 ARHGEF10O15013 1369 aa13.63□□□□□ -0.23
LINC01943-202ENST00000628090 ANKRD36BQ8N2N9 1353 aa13.63□□□□□ -0.23
LINC01943-202ENST00000628090 PARD3Q8TEW0 1356 aa13.63□□□□□ -0.23
LINC01943-202ENST00000628090 PAK3O75914 559 aaPredicted RBP13.63□□□□□ -0.23
LINC01943-202ENST00000628090 MYCNP04198 464 aaPredicted RBP13.63□□□□□ -0.23
LINC01943-202ENST00000628090 VPS72Q15906 364 aa13.63□□□□□ -0.23
LINC01943-202ENST00000628090 CABP2Q9NPB3 220 aa13.63□□□□□ -0.23
LINC01943-202ENST00000628090 CGNL1Q0VF96 1302 aa13.63□□□□□ -0.23
LINC01943-202ENST00000628090 TRPM3Q9HCF6 1732 aaPredicted RBP13.62□□□□□ -0.23
LINC01943-202ENST00000628090 SEPT12Q8IYM1 358 aa13.62□□□□□ -0.23
LINC01943-202ENST00000628090 NSD2O96028 1365 aa13.61□□□□□ -0.23
LINC01943-202ENST00000628090 RNF39Q9H2S5 420 aa13.61□□□□□ -0.23
LINC01943-202ENST00000628090 BTG4Q9NY30 223 aa13.61□□□□□ -0.23
LINC01943-202ENST00000628090 CCDC9Q9Y3X0 531 aaKnown RBP13.61□□□□□ -0.23
LINC01943-202ENST00000628090 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.61□□□□□ -0.23
LINC01943-202ENST00000628090 ONECUT3O60422 494 aaPredicted RBP13.6□□□□□ -0.23
LINC01943-202ENST00000628090 NUTM2GQ5VZR2 741 aa13.6□□□□□ -0.23
LINC01943-202ENST00000628090 FAM9BQ8IZU0 186 aa13.6□□□□□ -0.23
LINC01943-202ENST00000628090 ABCA3Q99758 1704 aa13.6□□□□□ -0.23
LINC01943-202ENST00000628090 ATP7BP35670 1465 aa13.6□□□□□ -0.23
LINC01943-202ENST00000628090 ALS2Q96Q42 1657 aa13.59□□□□□ -0.23
LINC01943-202ENST00000628090 SLC12A5Q9H2X9 1139 aa13.59□□□□□ -0.23
LINC01943-202ENST00000628090 PLCH1Q4KWH8 1693 aa13.59□□□□□ -0.23
LINC01943-202ENST00000628090 NSD3Q9BZ95 1437 aa13.58□□□□□ -0.24
LINC01943-202ENST00000628090 BRWD3Q6RI45 1802 aa13.58□□□□□ -0.24
LINC01943-202ENST00000628090 ACEP12821 1306 aa13.58□□□□□ -0.24
LINC01943-202ENST00000628090 CHRNA2Q15822 529 aa13.57□□□□□ -0.24
LINC01943-202ENST00000628090 FAM98CQ17RN3 349 aaKnown RBP13.57□□□□□ -0.24
LINC01943-202ENST00000628090 AMER1Q5JTC6 1135 aaPredicted RBP13.57□□□□□ -0.24
LINC01943-202ENST00000628090 MORC1Q86VD1 984 aa13.57□□□□□ -0.24
LINC01943-202ENST00000628090 CCDC61Q9Y6R9 512 aa13.57□□□□□ -0.24
LINC01943-202ENST00000628090 ITSN1Q15811 1721 aa13.56□□□□□ -0.24
LINC01943-202ENST00000628090 PLEKHG3A1L390 1219 aa13.56□□□□□ -0.24
LINC01943-202ENST00000628090 HNRNPUQ00839 825 aaKnown RBP eCLIP13.56□□□□□ -0.24
LINC01943-202ENST00000628090 DEFB132Q7Z7B7 95 aa13.56□□□□□ -0.24
LINC01943-202ENST00000628090 ZNF692Q9BU19 519 aaPredicted RBP13.56□□□□□ -0.24
LINC01943-202ENST00000628090 NWD2Q9ULI1 1742 aa13.56□□□□□ -0.24
LINC01943-202ENST00000628090 ZC3H6P61129 1189 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms