RNA–Protein interactions for RNA: ENST00000627450.2

PDXDC1-218, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-218ENST00000627450 KIF20BQ96Q89 1820 aa18.14■□□□□ 0.49
PDXDC1-218ENST00000627450 PHF8Q9UPP1 1060 aa18.14■□□□□ 0.49
PDXDC1-218ENST00000627450 POLR3AO14802 1390 aaPredicted RBP18.13■□□□□ 0.49
PDXDC1-218ENST00000627450 ADAMTS8Q9UP79 889 aa18.11■□□□□ 0.49
PDXDC1-218ENST00000627450 XPCQ01831 940 aaPredicted RBP18.11■□□□□ 0.49
PDXDC1-218ENST00000627450 FOXO3O43524 673 aa18.1■□□□□ 0.49
PDXDC1-218ENST00000627450 ATF3P18847 181 aa18.1■□□□□ 0.49
PDXDC1-218ENST00000627450 NUTM2GQ5VZR2 741 aa18.1■□□□□ 0.49
PDXDC1-218ENST00000627450 ANKRD26Q9UPS8 1709 aa18.1■□□□□ 0.49
PDXDC1-218ENST00000627450 SOX12O15370 315 aa18.1■□□□□ 0.49
PDXDC1-218ENST00000627450 PAK3O75914 559 aaPredicted RBP18.1■□□□□ 0.49
PDXDC1-218ENST00000627450 NRKQ7Z2Y5 1582 aa18.1■□□□□ 0.49
PDXDC1-218ENST00000627450 PPM1GO15355 546 aaPredicted RBP18.09■□□□□ 0.49
PDXDC1-218ENST00000627450 COG3Q96JB2 828 aa18.09■□□□□ 0.49
PDXDC1-218ENST00000627450 SSH2Q76I76 1423 aa18.09■□□□□ 0.49
PDXDC1-218ENST00000627450 XIRP1Q702N8 1843 aaKnown RBP18.09■□□□□ 0.49
PDXDC1-218ENST00000627450 SALL2Q9Y467 1007 aaPredicted RBP18.08■□□□□ 0.49
PDXDC1-218ENST00000627450 LRRC7Q96NW7 1537 aa18.08■□□□□ 0.48
PDXDC1-218ENST00000627450 WDR43Q15061 677 aaKnown RBP eCLIP18.07■□□□□ 0.48
PDXDC1-218ENST00000627450 RRS1Q15050 365 aaKnown RBP18.07■□□□□ 0.48
PDXDC1-218ENST00000627450 DDX17Q92841 729 aaKnown RBP18.07■□□□□ 0.48
PDXDC1-218ENST00000627450 C1orf167Q5SNV9 1468 aa18.07■□□□□ 0.48
PDXDC1-218ENST00000627450 PSME1Q06323 249 aa18.06■□□□□ 0.48
PDXDC1-218ENST00000627450 DMRT2Q9Y5R5 561 aa18.06■□□□□ 0.48
PDXDC1-218ENST00000627450 EMILIN1Q9Y6C2 1016 aa18.06■□□□□ 0.48
PDXDC1-218ENST00000627450 POLKQ9UBT6 870 aa18.06■□□□□ 0.48
PDXDC1-218ENST00000627450 MSH6P52701 1360 aa18.05■□□□□ 0.48
PDXDC1-218ENST00000627450 MAP2P11137 1827 aaKnown RBP18.05■□□□□ 0.48
PDXDC1-218ENST00000627450 PLEKHG5O94827 1062 aa18.05■□□□□ 0.48
PDXDC1-218ENST00000627450 MST1RQ04912 1400 aa18.04■□□□□ 0.48
PDXDC1-218ENST00000627450 CCDC146Q8IYE0 955 aa18.04■□□□□ 0.48
PDXDC1-218ENST00000627450 CADPS2Q86UW7 1296 aa18.04■□□□□ 0.48
PDXDC1-218ENST00000627450 ABTB2Q8N961 1025 aa18.04■□□□□ 0.48
PDXDC1-218ENST00000627450 NLRP6P59044 892 aa18.03■□□□□ 0.48
PDXDC1-218ENST00000627450 OVOS2A0A0J9YW53 1432 aa18.03■□□□□ 0.48
PDXDC1-218ENST00000627450 OVOS2Q6IE36 1432 aa18.03■□□□□ 0.48
PDXDC1-218ENST00000627450 NCOA3Q9Y6Q9 1424 aa18.03■□□□□ 0.48
PDXDC1-218ENST00000627450 TTC21AQ8NDW8 1320 aa18.02■□□□□ 0.48
PDXDC1-218ENST00000627450 PIK3C2AO00443 1686 aa18.02■□□□□ 0.47
PDXDC1-218ENST00000627450 CFAP53Q96M91 514 aa18.02■□□□□ 0.47
PDXDC1-218ENST00000627450 SHPRHQ149N8 1683 aa18■□□□□ 0.47
PDXDC1-218ENST00000627450 DCCP43146 1447 aa18■□□□□ 0.47
PDXDC1-218ENST00000627450 LMOD2Q6P5Q4 547 aa18■□□□□ 0.47
PDXDC1-218ENST00000627450 ZBED9Q6R2W3 1325 aa18■□□□□ 0.47
PDXDC1-218ENST00000627450 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
PDXDC1-218ENST00000627450 U2SURPO15042 1029 aaKnown RBP17.98■□□□□ 0.47
PDXDC1-218ENST00000627450 KRT28Q7Z3Y7 464 aa17.98■□□□□ 0.47
PDXDC1-218ENST00000627450 BLMP54132 1417 aaPredicted RBP17.98■□□□□ 0.47
PDXDC1-218ENST00000627450 U2AF1L5P0DN76 240 aaPredicted RBP17.97■□□□□ 0.47
PDXDC1-218ENST00000627450 U2AF1Q01081 240 aaKnown RBP eCLIP17.97■□□□□ 0.47
PDXDC1-218ENST00000627450 COL3A1P02461 1466 aaPredicted RBP17.97■□□□□ 0.47
PDXDC1-218ENST00000627450 AATKQ6ZMQ8 1374 aa17.97■□□□□ 0.47
PDXDC1-218ENST00000627450 SLAIN2Q9P270 581 aa17.96■□□□□ 0.47
PDXDC1-218ENST00000627450 PNPLA6Q8IY17 1366 aa17.96■□□□□ 0.47
PDXDC1-218ENST00000627450 USP31Q70CQ4 1352 aa17.95■□□□□ 0.46
PDXDC1-218ENST00000627450 DIAPH1O60610 1272 aaKnown RBP17.95■□□□□ 0.46
PDXDC1-218ENST00000627450 BRINP3Q76B58 766 aa17.95■□□□□ 0.46
PDXDC1-218ENST00000627450 APAF1O14727 1248 aa17.94■□□□□ 0.46
PDXDC1-218ENST00000627450 MARF1Q9Y4F3 1742 aaKnown RBP17.94■□□□□ 0.46
PDXDC1-218ENST00000627450 MAP3K19Q56UN5 1328 aa17.94■□□□□ 0.46
PDXDC1-218ENST00000627450 HSP90AB2PQ58FF8 381 aa17.93■□□□□ 0.46
PDXDC1-218ENST00000627450 KIF1AQ12756 1690 aa17.92■□□□□ 0.46
PDXDC1-218ENST00000627450 AEBP2Q6ZN18 517 aaPredicted RBP17.91■□□□□ 0.46
PDXDC1-218ENST00000627450 NUDCQ9Y266 331 aa17.91■□□□□ 0.46
PDXDC1-218ENST00000627450 SMG6Q86US8 1419 aaKnown RBP17.91■□□□□ 0.46
PDXDC1-218ENST00000627450 PEAK1Q9H792 1746 aa17.91■□□□□ 0.46
PDXDC1-218ENST00000627450 NEUROD2Q15784 382 aa17.9■□□□□ 0.46
PDXDC1-218ENST00000627450 RRP7AQ9Y3A4 280 aaKnown RBP17.9■□□□□ 0.46
PDXDC1-218ENST00000627450 ZBTB7CA1YPR0 619 aa17.9■□□□□ 0.46
PDXDC1-218ENST00000627450 HMOX1P09601 288 aa17.9■□□□□ 0.46
PDXDC1-218ENST00000627450 CDK12Q9NYV4 1490 aaPredicted RBP17.9■□□□□ 0.46
PDXDC1-218ENST00000627450 TRPM3Q9HCF6 1732 aaPredicted RBP17.9■□□□□ 0.46
PDXDC1-218ENST00000627450 NPHP3Q7Z494 1330 aa17.9■□□□□ 0.46
PDXDC1-218ENST00000627450 IL13P35225 146 aa17.89■□□□□ 0.45
PDXDC1-218ENST00000627450 INSRP06213 1382 aa17.89■□□□□ 0.45
PDXDC1-218ENST00000627450 LTBP4Q8N2S1 1624 aa17.88■□□□□ 0.45
PDXDC1-218ENST00000627450 AMPHP49418 695 aa17.88■□□□□ 0.45
PDXDC1-218ENST00000627450 CDCA7LQ96GN5 454 aa17.88■□□□□ 0.45
PDXDC1-218ENST00000627450 EIF4A2Q14240 407 aaKnown RBP17.87■□□□□ 0.45
PDXDC1-218ENST00000627450 CABLES1Q8TDN4 633 aa17.87■□□□□ 0.45
PDXDC1-218ENST00000627450 RUNDC1Q96C34 613 aa17.87■□□□□ 0.45
PDXDC1-218ENST00000627450 GCP02774 474 aa17.86■□□□□ 0.45
PDXDC1-218ENST00000627450 TCP11L2Q8N4U5 519 aa17.86■□□□□ 0.45
PDXDC1-218ENST00000627450 PLEKHF1Q96S99 279 aa17.85■□□□□ 0.45
PDXDC1-218ENST00000627450 GTF3C3Q9Y5Q9 886 aa17.85■□□□□ 0.45
PDXDC1-218ENST00000627450 PXDNQ92626 1479 aa17.85■□□□□ 0.45
PDXDC1-218ENST00000627450 LTV1Q96GA3 475 aaPredicted RBP17.84■□□□□ 0.45
PDXDC1-218ENST00000627450 USP54Q70EL1 1684 aa17.84■□□□□ 0.45
PDXDC1-218ENST00000627450 SBNO1A3KN83 1393 aa17.84■□□□□ 0.45
PDXDC1-218ENST00000627450 FLT4P35916 1363 aa17.84■□□□□ 0.45
PDXDC1-218ENST00000627450 HOXC9P31274 260 aa17.84■□□□□ 0.45
PDXDC1-218ENST00000627450 AEBP1Q8IUX7 1158 aa17.84■□□□□ 0.45
PDXDC1-218ENST00000627450 ALS2Q96Q42 1657 aa17.83■□□□□ 0.45
PDXDC1-218ENST00000627450 PRKAR2BP31323 418 aa17.83■□□□□ 0.44
PDXDC1-218ENST00000627450 ZC3H6P61129 1189 aaKnown RBP17.83■□□□□ 0.44
PDXDC1-218ENST00000627450 RSPH6AQ9H0K4 717 aa17.83■□□□□ 0.44
PDXDC1-218ENST00000627450 NFAT5O94916 1531 aa17.82■□□□□ 0.44
PDXDC1-218ENST00000627450 SPATA31A3Q5VYP0 1347 aa17.82■□□□□ 0.44
PDXDC1-218ENST00000627450 LTN1O94822 1766 aa17.82■□□□□ 0.44
PDXDC1-218ENST00000627450 KCNH5Q8NCM2 988 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms