RNA–Protein interactions for RNA: ENST00000627212.2

RAPGEF6-215, Transcript of Rap guanine nucleotide exchange factor 6, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,694 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF6-215	ENST00000627212	UPF3B	Q9BZI7	483 aa	Known RBP	11.98	□□□□□ -0.49
RAPGEF6-215	ENST00000627212	SLFN5	Q08AF3	891 aa		11.97	□□□□□ -0.49
RAPGEF6-215	ENST00000627212	CCDC173	Q0VFZ6	552 aa		11.97	□□□□□ -0.49
RAPGEF6-215	ENST00000627212	TXNDC2	Q86VQ3	553 aa		11.97	□□□□□ -0.49
RAPGEF6-215	ENST00000627212	SMC2	O95347	1197 aa		11.97	□□□□□ -0.49
RAPGEF6-215	ENST00000627212	DDX54	Q8TDD1	881 aa	Known RBP	11.97	□□□□□ -0.49
RAPGEF6-215	ENST00000627212	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.97	□□□□□ -0.49
RAPGEF6-215	ENST00000627212	RAPGEF4	Q8WZA2	1011 aa		11.97	□□□□□ -0.49
RAPGEF6-215	ENST00000627212	RRS1	Q15050	365 aa	Known RBP	11.96	□□□□□ -0.49
RAPGEF6-215	ENST00000627212	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.96	□□□□□ -0.49
RAPGEF6-215	ENST00000627212	VPS37D	Q86XT2	251 aa		11.96	□□□□□ -0.49
RAPGEF6-215	ENST00000627212	TMX4	Q9H1E5	349 aa	Predicted RBP	11.96	□□□□□ -0.49
RAPGEF6-215	ENST00000627212	EXOC6B	Q9Y2D4	811 aa		11.96	□□□□□ -0.49
RAPGEF6-215	ENST00000627212	CHMP4C	Q96CF2	233 aa		11.96	□□□□□ -0.49
RAPGEF6-215	ENST00000627212	MIS18A	Q9NYP9	233 aa		11.96	□□□□□ -0.49
RAPGEF6-215	ENST00000627212	KIN	O60870	393 aa	Known RBP	11.96	□□□□□ -0.49
RAPGEF6-215	ENST00000627212	GNAI2	P04899	355 aa		11.96	□□□□□ -0.49
RAPGEF6-215	ENST00000627212	HDGFL1	Q5TGJ6	251 aa		11.96	□□□□□ -0.49
RAPGEF6-215	ENST00000627212	BRPF1	P55201	1214 aa	Predicted RBP	11.96	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	TEX35	Q5T0J7	233 aa		11.95	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	NAP1L1	P55209	391 aa	Known RBP	11.95	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	DCTN1	Q14203	1278 aa		11.95	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	FERMT3	Q86UX7	667 aa		11.95	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	FAM177A1	Q8N128	213 aa	Predicted RBP	11.95	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	ANKRD20A12P	Q8NF67	263 aa		11.95	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	FYCO1	Q9BQS8	1478 aa		11.95	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	SYCE3	A1L190	88 aa		11.95	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	SAFB	Q15424	915 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	CCDC30	Q5VVM6	783 aa		11.95	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	SMARCA5	O60264	1052 aa	Predicted RBP	11.94	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	KIAA1107	Q9UPP5	1409 aa		11.94	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	ABTB2	Q8N961	1025 aa		11.94	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	HFM1	A2PYH4	1435 aa		11.94	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	TPM2	P07951	284 aa		11.93	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	CCDC70	Q6NSX1	233 aa		11.93	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	FILIP1	Q7Z7B0	1213 aa		11.93	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	SSH1	Q8WYL5	1049 aa		11.93	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	PKNOX2	Q96KN3	472 aa		11.93	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	UQCRHL	A0A096LP55	91 aa		11.93	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	UQCRH	P07919	91 aa		11.93	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	PSMA5	P28066	241 aa		11.93	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	PRG4	Q92954	1404 aa	Predicted RBP	11.93	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	CUX1	P39880	1505 aa		11.93	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	RRP12	Q5JTH9	1297 aa	Known RBP	11.93	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	CWC27	Q6UX04	472 aa	Known RBP	11.93	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.93	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	ERICH2	A1L162	156 aa		11.93	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	WDR63	Q8IWG1	891 aa		11.93	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	TBC1D2	Q9BYX2	928 aa		11.93	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	LRRCC1	Q9C099	1032 aa		11.92	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.92	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	LARP1B	Q659C4	914 aa	Known RBP	11.92	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	STAC3	Q96MF2	364 aa		11.92	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	LARP6	Q9BRS8	491 aa	Known RBP	11.92	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	CDK19	Q9BWU1	502 aa		11.92	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	MCM2	P49736	904 aa		11.92	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	HOOK1	Q9UJC3	728 aa	Known RBP	11.92	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	SYNJ1	O43426	1573 aa		11.91	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	SRGAP3	O43295	1099 aa		11.91	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	TMPO	P42166	694 aa	Known RBP	11.91	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	STK38	Q15208	465 aa		11.91	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	PRM3	Q9NNZ6	103 aa		11.91	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	PDC	P20941	246 aa		11.91	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	ME1	P48163	572 aa		11.91	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	HSP90B2P	Q58FF3	399 aa		11.91	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	CYP46A1	Q9Y6A2	500 aa		11.91	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	RARS	P54136	660 aa	Known RBP	11.91	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	OLFM4	Q6UX06	510 aa		11.91	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	MAP7D2	Q96T17	732 aa		11.91	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	NAT10	Q9H0A0	1025 aa	Known RBP	11.91	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	NINL	Q9Y2I6	1382 aa		11.91	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	SSFA2	P28290	1259 aa		11.9	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	NUTM1	Q86Y26	1132 aa		11.9	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	TNMD	Q9H2S6	317 aa		11.9	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	FAM69C	Q0P6D2	419 aa		11.9	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	GDPD2	Q9HCC8	539 aa		11.9	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	NAIP	Q13075	1403 aa		11.9	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	ERBIN	Q96RT1	1412 aa		11.9	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	PRDM2	Q13029	1718 aa		11.9	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	HMGN5	P82970	282 aa	Known RBP	11.9	□□□□□ -0.5
RAPGEF6-215	ENST00000627212	XPC	Q01831	940 aa	Predicted RBP	11.9	□□□□□ -0.51
RAPGEF6-215	ENST00000627212	DDX11	Q96FC9	970 aa		11.9	□□□□□ -0.51
RAPGEF6-215	ENST00000627212	JAKMIP1	Q96N16	626 aa	Known RBP	11.9	□□□□□ -0.51
RAPGEF6-215	ENST00000627212	FBXO3	Q9UK99	471 aa		11.9	□□□□□ -0.51
RAPGEF6-215	ENST00000627212	WDR33	Q9C0J8	1336 aa	Known RBP	11.9	□□□□□ -0.51
RAPGEF6-215	ENST00000627212	CCDC192	P0DO97	292 aa		11.89	□□□□□ -0.51
RAPGEF6-215	ENST00000627212	CAMK4	Q16566	473 aa		11.89	□□□□□ -0.51
RAPGEF6-215	ENST00000627212	GAS2L2	Q8NHY3	880 aa		11.89	□□□□□ -0.51
RAPGEF6-215	ENST00000627212	CWC22	Q9HCG8	908 aa	Known RBP	11.89	□□□□□ -0.51
RAPGEF6-215	ENST00000627212	MYL6B	P14649	208 aa		11.89	□□□□□ -0.51
RAPGEF6-215	ENST00000627212	SET	Q01105	290 aa	Predicted RBP	11.89	□□□□□ -0.51
RAPGEF6-215	ENST00000627212	SRCIN1	Q9C0H9	1055 aa		11.89	□□□□□ -0.51
RAPGEF6-215	ENST00000627212	PRDM10	Q9NQV6	1147 aa		11.89	□□□□□ -0.51
RAPGEF6-215	ENST00000627212	IGHD	P01880	384 aa		11.89	□□□□□ -0.51
RAPGEF6-215	ENST00000627212	MCM10	Q7L590	875 aa		11.89	□□□□□ -0.51
RAPGEF6-215	ENST00000627212	CCDC47	Q96A33	483 aa	Known RBP	11.89	□□□□□ -0.51
RAPGEF6-215	ENST00000627212	KRT85	P78386	507 aa		11.88	□□□□□ -0.51
RAPGEF6-215	ENST00000627212	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.88	□□□□□ -0.51
RAPGEF6-215	ENST00000627212	PRKCSH	P14314	528 aa	Predicted RBP	11.88	□□□□□ -0.51
RAPGEF6-215	ENST00000627212	RUFY1	Q96T51	708 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms