RNA–Protein interactions for RNA: ENST00000625395.1

SEC23A-215, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 5 BASIC

Gene SEC23A, Length 261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-215ENST00000625395 ARMC2Q8NEN0 867 aa8.84□□□□□ -0.99
SEC23A-215ENST00000625395 MRGPRX2Q96LB1 330 aa8.84□□□□□ -0.99
SEC23A-215ENST00000625395 SH3BP2P78314 561 aa8.83□□□□□ -1
SEC23A-215ENST00000625395 ZNF511Q8NB15 262 aa8.83□□□□□ -1
SEC23A-215ENST00000625395 IL27Q8NEV9 243 aa8.83□□□□□ -1
SEC23A-215ENST00000625395 AVPP01185 164 aa8.82□□□□□ -1
SEC23A-215ENST00000625395 MPNDQ8N594 471 aa8.82□□□□□ -1
SEC23A-215ENST00000625395 TSC1Q92574 1164 aa8.82□□□□□ -1
SEC23A-215ENST00000625395 MAP10Q9P2G4 905 aa8.82□□□□□ -1
SEC23A-215ENST00000625395 FAM187AA6NFU0 413 aa8.81□□□□□ -1
SEC23A-215ENST00000625395 CRIPAKQ8N1N5 446 aa8.81□□□□□ -1
SEC23A-215ENST00000625395 BAP1Q92560 729 aa8.81□□□□□ -1
SEC23A-215ENST00000625395 GPKOWQ92917 476 aaPredicted RBP eCLIP8.81□□□□□ -1
SEC23A-215ENST00000625395 TTC24A2A3L6 582 aaPredicted RBP8.8□□□□□ -1
SEC23A-215ENST00000625395 LCE2BO14633 110 aa8.8□□□□□ -1
SEC23A-215ENST00000625395 SIAH2O43255 324 aa8.8□□□□□ -1
SEC23A-215ENST00000625395 VARSP26640 1264 aaKnown RBP8.8□□□□□ -1
SEC23A-215ENST00000625395 CTDSPL2Q05D32 466 aa8.8□□□□□ -1
SEC23A-215ENST00000625395 TMEM259Q4ZIN3 620 aa8.8□□□□□ -1
SEC23A-215ENST00000625395 FBXO31Q5XUX0 539 aaPredicted RBP8.8□□□□□ -1
SEC23A-215ENST00000625395 EHBP1Q8NDI1 1231 aa8.8□□□□□ -1
SEC23A-215ENST00000625395 MYT1Q01538 1121 aa8.79□□□□□ -1
SEC23A-215ENST00000625395 NBPF14Q5TI25 921 aa8.79□□□□□ -1
SEC23A-215ENST00000625395 ATP1B4Q9UN42 357 aaPredicted RBP8.79□□□□□ -1
SEC23A-215ENST00000625395 RFC5P40937 340 aa8.78□□□□□ -1
SEC23A-215ENST00000625395 SMCPP49901 116 aaPredicted RBP8.78□□□□□ -1
SEC23A-215ENST00000625395 CTC1Q2NKJ3 1217 aa8.78□□□□□ -1
SEC23A-215ENST00000625395 ZC3H4Q9UPT8 1303 aaKnown RBP8.78□□□□□ -1
SEC23A-215ENST00000625395 PRKCSHP14314 528 aaPredicted RBP8.77□□□□□ -1.01
SEC23A-215ENST00000625395 SMPD1P17405 629 aa8.77□□□□□ -1.01
SEC23A-215ENST00000625395 LINC01559Q495D7 138 aa8.76□□□□□ -1.01
SEC23A-215ENST00000625395 BPHLQ86WA6 291 aaPredicted RBP8.76□□□□□ -1.01
SEC23A-215ENST00000625395 SOCS7O14512 581 aa8.75□□□□□ -1.01
SEC23A-215ENST00000625395 AP1G2O75843 785 aa8.75□□□□□ -1.01
SEC23A-215ENST00000625395 SH3RF1Q7Z6J0 888 aa8.74□□□□□ -1.01
SEC23A-215ENST00000625395 PNMA1Q8ND90 353 aa8.74□□□□□ -1.01
SEC23A-215ENST00000625395 FAM174AQ8TBP5 190 aa8.74□□□□□ -1.01
SEC23A-215ENST00000625395 J3QL48 77 aa8.73□□□□□ -1.01
SEC23A-215ENST00000625395 USP17L8P0C7I0 530 aa8.73□□□□□ -1.01
SEC23A-215ENST00000625395 PDXDC2PQ6P474 469 aa8.73□□□□□ -1.01
SEC23A-215ENST00000625395 SH3BP5LQ7L8J4 393 aa8.73□□□□□ -1.01
SEC23A-215ENST00000625395 BANK1Q8NDB2 785 aa8.73□□□□□ -1.01
SEC23A-215ENST00000625395 LRRN4Q8WUT4 740 aa8.73□□□□□ -1.01
SEC23A-215ENST00000625395 CDK15Q96Q40 435 aa8.73□□□□□ -1.01
SEC23A-215ENST00000625395 FKBPLQ9UIM3 349 aa8.73□□□□□ -1.01
SEC23A-215ENST00000625395 ALDH1A1P00352 501 aa8.72□□□□□ -1.01
SEC23A-215ENST00000625395 FOXJ1Q92949 421 aa8.72□□□□□ -1.01
SEC23A-215ENST00000625395 C1QTNF2Q9BXJ5 285 aa8.72□□□□□ -1.01
SEC23A-215ENST00000625395 AAASQ9NRG9 546 aa8.72□□□□□ -1.01
SEC23A-215ENST00000625395 GPSM3Q9Y4H4 160 aa8.72□□□□□ -1.01
SEC23A-215ENST00000625395 TRMT44Q8IYL2 757 aaKnown RBP8.71□□□□□ -1.02
SEC23A-215ENST00000625395 AXIN1O15169 862 aa8.7□□□□□ -1.02
SEC23A-215ENST00000625395 NR6A1Q15406 480 aa8.7□□□□□ -1.02
SEC23A-215ENST00000625395 AGERQ15109 404 aa8.69□□□□□ -1.02
SEC23A-215ENST00000625395 C4orf48Q5BLP8 95 aa8.69□□□□□ -1.02
SEC23A-215ENST00000625395 MAP4K5Q9Y4K4 846 aa8.69□□□□□ -1.02
SEC23A-215ENST00000625395 WASF2Q9Y6W5 498 aa8.69□□□□□ -1.02
SEC23A-215ENST00000625395 HPS1Q92902 700 aa8.68□□□□□ -1.02
SEC23A-215ENST00000625395 ADH1CP00326 375 aa8.67□□□□□ -1.02
SEC23A-215ENST00000625395 HMX1Q9NP08 348 aaPredicted RBP8.67□□□□□ -1.02
SEC23A-215ENST00000625395 CDV3Q9UKY7 258 aaKnown RBP8.67□□□□□ -1.02
SEC23A-215ENST00000625395 APBB1O00213 710 aa8.66□□□□□ -1.02
SEC23A-215ENST00000625395 ST8SIA5O15466 376 aa8.66□□□□□ -1.02
SEC23A-215ENST00000625395 PTK2Q05397 1052 aa8.66□□□□□ -1.02
SEC23A-215ENST00000625395 NR5A1Q13285 461 aa8.66□□□□□ -1.02
SEC23A-215ENST00000625395 TLL2Q9Y6L7 1015 aa8.66□□□□□ -1.02
SEC23A-215ENST00000625395 ARHGAP9Q9BRR9 750 aa8.65□□□□□ -1.02
SEC23A-215ENST00000625395 TRIM34Q9BYJ4 488 aa8.65□□□□□ -1.02
SEC23A-215ENST00000625395 ERFEQ4G0M1 354 aa8.64□□□□□ -1.03
SEC23A-215ENST00000625395 ZNF787Q6DD87 383 aa8.64□□□□□ -1.03
SEC23A-215ENST00000625395 GJD4Q96KN9 370 aaPredicted RBP8.64□□□□□ -1.03
SEC23A-215ENST00000625395 GRM5P41594 1212 aa8.63□□□□□ -1.03
SEC23A-215ENST00000625395 NNTQ13423 1086 aa8.63□□□□□ -1.03
SEC23A-215ENST00000625395 EPS8L1Q8TE68 723 aa8.63□□□□□ -1.03
SEC23A-215ENST00000625395 MAGEB6P1A0A0J9YX57 407 aa8.62□□□□□ -1.03
SEC23A-215ENST00000625395 ZBTB33Q86T24 672 aa8.61□□□□□ -1.03
SEC23A-215ENST00000625395 KLF16Q9BXK1 252 aaPredicted RBP8.61□□□□□ -1.03
SEC23A-215ENST00000625395 CAPN5O15484 640 aaPredicted RBP8.6□□□□□ -1.03
SEC23A-215ENST00000625395 ARID5BQ14865 1188 aa8.6□□□□□ -1.03
SEC23A-215ENST00000625395 VASH1Q7L8A9 365 aaPredicted RBP8.6□□□□□ -1.03
SEC23A-215ENST00000625395 OCSTAMPQ9BR26 566 aa8.6□□□□□ -1.03
SEC23A-215ENST00000625395 CARD14Q9BXL6 1004 aa8.6□□□□□ -1.03
SEC23A-215ENST00000625395 SENP2Q9HC62 589 aa8.6□□□□□ -1.03
SEC23A-215ENST00000625395 ATP13A2Q9NQ11 1180 aa8.6□□□□□ -1.03
SEC23A-215ENST00000625395 MTMR14Q8NCE2 650 aa8.59□□□□□ -1.03
SEC23A-215ENST00000625395 SLC10A4Q96EP9 437 aa8.59□□□□□ -1.03
SEC23A-215ENST00000625395 DACH1Q9UI36 760 aa8.59□□□□□ -1.03
SEC23A-215ENST00000625395 TIMP2P16035 220 aa8.58□□□□□ -1.04
SEC23A-215ENST00000625395 ADAM32Q8TC27 787 aa8.58□□□□□ -1.04
SEC23A-215ENST00000625395 ZNF592Q92610 1267 aa8.58□□□□□ -1.04
SEC23A-215ENST00000625395 KIFC2Q96AC6 838 aa8.58□□□□□ -1.04
SEC23A-215ENST00000625395 ZBBXA8MT70 800 aa8.57□□□□□ -1.04
SEC23A-215ENST00000625395 MCCD1P59942 119 aaPredicted RBP8.57□□□□□ -1.04
SEC23A-215ENST00000625395 NBPF20Q3BBV1 942 aa8.57□□□□□ -1.04
SEC23A-215ENST00000625395 NDUFB9Q9Y6M9 179 aa8.57□□□□□ -1.04
SEC23A-215ENST00000625395 NR3C2P08235 984 aa8.56□□□□□ -1.04
SEC23A-215ENST00000625395 FSHRP23945 695 aa8.56□□□□□ -1.04
SEC23A-215ENST00000625395 WDR4P57081 412 aaKnown RBP8.56□□□□□ -1.04
SEC23A-215ENST00000625395 CCDC116Q8IYX3 515 aa8.56□□□□□ -1.04
SEC23A-215ENST00000625395 PRM3Q9NNZ6 103 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms