RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 GJD4Q96KN9 370 aaPredicted RBP28.57■■■□□ 2.16
R3HCC1-210ENST00000625275 RALGAPBQ86X10 1494 aa28.57■■■□□ 2.16
R3HCC1-210ENST00000625275 L3MBTL2Q969R5 705 aa28.56■■■□□ 2.16
R3HCC1-210ENST00000625275 COL14A1Q05707 1796 aaKnown RBP28.56■■■□□ 2.16
R3HCC1-210ENST00000625275 NGDNQ8NEJ9 315 aaKnown RBP28.55■■■□□ 2.16
R3HCC1-210ENST00000625275 NUDT16Q96DE0 195 aaKnown RBP28.54■■■□□ 2.16
R3HCC1-210ENST00000625275 PHRF1Q9P1Y6 1649 aaKnown RBP28.53■■■□□ 2.16
R3HCC1-210ENST00000625275 CDK19Q9BWU1 502 aa28.52■■■□□ 2.16
R3HCC1-210ENST00000625275 CENPJQ9HC77 1338 aaPredicted RBP28.47■■■□□ 2.15
R3HCC1-210ENST00000625275 POLR3AO14802 1390 aaPredicted RBP28.47■■■□□ 2.15
R3HCC1-210ENST00000625275 EP400Q96L91 3159 aa28.47■■■□□ 2.15
R3HCC1-210ENST00000625275 PAK3O75914 559 aaPredicted RBP28.46■■■□□ 2.15
R3HCC1-210ENST00000625275 TIMELESSQ9UNS1 1208 aa28.46■■■□□ 2.15
R3HCC1-210ENST00000625275 VPS72Q15906 364 aa28.46■■■□□ 2.15
R3HCC1-210ENST00000625275 FAM83GA6ND36 823 aa28.45■■■□□ 2.14
R3HCC1-210ENST00000625275 CCDC61Q9Y6R9 512 aa28.45■■■□□ 2.14
R3HCC1-210ENST00000625275 ACEP12821 1306 aa28.41■■■□□ 2.14
R3HCC1-210ENST00000625275 CCDC9Q9Y3X0 531 aaKnown RBP28.4■■■□□ 2.14
R3HCC1-210ENST00000625275 PLEKHG3A1L390 1219 aa28.4■■■□□ 2.14
R3HCC1-210ENST00000625275 PPIP5K1Q6PFW1 1433 aa28.39■■■□□ 2.14
R3HCC1-210ENST00000625275 SRPK2P78362 688 aaKnown RBP28.39■■■□□ 2.13
R3HCC1-210ENST00000625275 BTG4Q9NY30 223 aa28.38■■■□□ 2.13
R3HCC1-210ENST00000625275 NRKQ7Z2Y5 1582 aa28.38■■■□□ 2.13
R3HCC1-210ENST00000625275 NBPF8Q3BBV2 869 aa28.37■■■□□ 2.13
R3HCC1-210ENST00000625275 SEPT12Q8IYM1 358 aa28.35■■■□□ 2.13
R3HCC1-210ENST00000625275 ROCK2O75116 1388 aaKnown RBP28.35■■■□□ 2.13
R3HCC1-210ENST00000625275 PRDM11Q9NQV5 511 aa28.34■■■□□ 2.13
R3HCC1-210ENST00000625275 CABP2Q9NPB3 220 aa28.34■■■□□ 2.13
R3HCC1-210ENST00000625275 ONECUT3O60422 494 aaPredicted RBP28.33■■■□□ 2.13
R3HCC1-210ENST00000625275 KIAA0232Q92628 1395 aa28.33■■■□□ 2.13
R3HCC1-210ENST00000625275 AKAP12Q02952 1782 aa28.32■■■□□ 2.12
R3HCC1-210ENST00000625275 CCDC125Q86Z20 511 aa28.32■■■□□ 2.12
R3HCC1-210ENST00000625275 NUTM2GQ5VZR2 741 aa28.31■■■□□ 2.12
R3HCC1-210ENST00000625275 THSD7AQ9UPZ6 1657 aa28.31■■■□□ 2.12
R3HCC1-210ENST00000625275 BLMP54132 1417 aaPredicted RBP28.29■■■□□ 2.12
R3HCC1-210ENST00000625275 LMO7Q8WWI1 1683 aa28.28■■■□□ 2.12
R3HCC1-210ENST00000625275 BRD4O60885 1362 aaPredicted RBP28.28■■■□□ 2.12
R3HCC1-210ENST00000625275 EVC2Q86UK5 1308 aa28.27■■■□□ 2.12
R3HCC1-210ENST00000625275 ABTB2Q8N961 1025 aa28.27■■■□□ 2.12
R3HCC1-210ENST00000625275 USP19O94966 1318 aa28.26■■■□□ 2.12
R3HCC1-210ENST00000625275 SPATA31A5Q5VU36 1347 aa28.26■■■□□ 2.12
R3HCC1-210ENST00000625275 SPATA31A7Q8IWB4 1347 aa28.26■■■□□ 2.12
R3HCC1-210ENST00000625275 USP6P35125 1406 aa28.26■■■□□ 2.11
R3HCC1-210ENST00000625275 A0A0G2JS52 829 aa28.26■■■□□ 2.11
R3HCC1-210ENST00000625275 MYT1Q01538 1121 aa28.26■■■□□ 2.11
R3HCC1-210ENST00000625275 FAM98CQ17RN3 349 aaKnown RBP28.26■■■□□ 2.11
R3HCC1-210ENST00000625275 PIK3C2AO00443 1686 aa28.25■■■□□ 2.11
R3HCC1-210ENST00000625275 KRT27Q7Z3Y8 459 aa28.25■■■□□ 2.11
R3HCC1-210ENST00000625275 ZC3H6P61129 1189 aaKnown RBP28.24■■■□□ 2.11
R3HCC1-210ENST00000625275 CHRNA2Q15822 529 aa28.24■■■□□ 2.11
R3HCC1-210ENST00000625275 CABP1Q9NZU7 370 aa28.23■■■□□ 2.11
R3HCC1-210ENST00000625275 RGPD1P0DJD0 1748 aa28.22■■■□□ 2.11
R3HCC1-210ENST00000625275 CPDO75976 1380 aa28.21■■■□□ 2.11
R3HCC1-210ENST00000625275 NLRP13Q86W25 1043 aa28.21■■■□□ 2.11
R3HCC1-210ENST00000625275 MON2Q7Z3U7 1717 aa28.2■■■□□ 2.11
R3HCC1-210ENST00000625275 CAMTA1Q9Y6Y1 1673 aa28.2■■■□□ 2.11
R3HCC1-210ENST00000625275 SLIT3O75094 1523 aa28.19■■■□□ 2.1
R3HCC1-210ENST00000625275 STRN4Q9NRL3 753 aa28.18■■■□□ 2.1
R3HCC1-210ENST00000625275 SSH2Q76I76 1423 aa28.18■■■□□ 2.1
R3HCC1-210ENST00000625275 SBNO2Q9Y2G9 1366 aa28.17■■■□□ 2.1
R3HCC1-210ENST00000625275 SPATA31A1Q5TZJ5 1347 aa28.17■■■□□ 2.1
R3HCC1-210ENST00000625275 ZEB1P37275 1124 aaPredicted RBP28.16■■■□□ 2.1
R3HCC1-210ENST00000625275 SF3B2Q13435 895 aaKnown RBP28.15■■■□□ 2.1
R3HCC1-210ENST00000625275 TNS1Q9HBL0 1735 aaKnown RBP28.15■■■□□ 2.1
R3HCC1-210ENST00000625275 GCP02774 474 aa28.14■■■□□ 2.09
R3HCC1-210ENST00000625275 CARD11Q9BXL7 1154 aa28.13■■■□□ 2.09
R3HCC1-210ENST00000625275 ZRANB1Q9UGI0 708 aa28.13■■■□□ 2.09
R3HCC1-210ENST00000625275 COL18A1P39060 1754 aa28.13■■■□□ 2.09
R3HCC1-210ENST00000625275 RGPD5Q99666 1765 aa28.12■■■□□ 2.09
R3HCC1-210ENST00000625275 EVA1CP58658 441 aa28.11■■■□□ 2.09
R3HCC1-210ENST00000625275 NLRP6P59044 892 aa28.11■■■□□ 2.09
R3HCC1-210ENST00000625275 DEFB132Q7Z7B7 95 aa28.11■■■□□ 2.09
R3HCC1-210ENST00000625275 COL5A2P05997 1499 aaPredicted RBP28.1■■■□□ 2.09
R3HCC1-210ENST00000625275 PARP4Q9UKK3 1724 aaKnown RBP28.1■■■□□ 2.09
R3HCC1-210ENST00000625275 WNK3Q9BYP7 1800 aa28.09■■■□□ 2.09
R3HCC1-210ENST00000625275 CPSF1Q10570 1443 aaKnown RBP28.09■■■□□ 2.09
R3HCC1-210ENST00000625275 ZNF692Q9BU19 519 aaPredicted RBP28.08■■■□□ 2.09
R3HCC1-210ENST00000625275 USP54Q70EL1 1684 aa28.08■■■□□ 2.09
R3HCC1-210ENST00000625275 USP35Q9P2H5 1018 aa28.07■■■□□ 2.08
R3HCC1-210ENST00000625275 TTC21BQ7Z4L5 1316 aa28.06■■■□□ 2.08
R3HCC1-210ENST00000625275 LARP1Q6PKG0 1096 aaKnown RBP28.06■■■□□ 2.08
R3HCC1-210ENST00000625275 FAM182BQ5T319 152 aa28.05■■■□□ 2.08
R3HCC1-210ENST00000625275 BARGINQ6ZT62 677 aa28.05■■■□□ 2.08
R3HCC1-210ENST00000625275 TTC21AQ8NDW8 1320 aa28.05■■■□□ 2.08
R3HCC1-210ENST00000625275 AATKQ6ZMQ8 1374 aa28.05■■■□□ 2.08
R3HCC1-210ENST00000625275 KTN1Q86UP2 1357 aaKnown RBP28.05■■■□□ 2.08
R3HCC1-210ENST00000625275 ZBTB7CA1YPR0 619 aa28.02■■■□□ 2.08
R3HCC1-210ENST00000625275 BAG6P46379 1132 aa28.02■■■□□ 2.08
R3HCC1-210ENST00000625275 TCP11L2Q8N4U5 519 aa28.02■■■□□ 2.08
R3HCC1-210ENST00000625275 CRB1P82279 1406 aa28.01■■■□□ 2.07
R3HCC1-210ENST00000625275 NFAT5O94916 1531 aa28.01■■■□□ 2.07
R3HCC1-210ENST00000625275 LTN1O94822 1766 aa28.01■■■□□ 2.07
R3HCC1-210ENST00000625275 CD163L1Q9NR16 1453 aa28.01■■■□□ 2.07
R3HCC1-210ENST00000625275 LRRC37A3O60309 1634 aa27.99■■■□□ 2.07
R3HCC1-210ENST00000625275 DISP2A7MBM2 1401 aa27.99■■■□□ 2.07
R3HCC1-210ENST00000625275 THRAP3Q9Y2W1 955 aaKnown RBP27.99■■■□□ 2.07
R3HCC1-210ENST00000625275 KCNH5Q8NCM2 988 aa27.97■■■□□ 2.07
R3HCC1-210ENST00000625275 ABCC6O95255 1503 aa27.97■■■□□ 2.07
R3HCC1-210ENST00000625275 USP47Q96K76 1375 aa27.97■■■□□ 2.07
R3HCC1-210ENST00000625275 FAM196AQ6ZSG2 479 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms