RNA–Protein interactions for RNA: ENST00000624968.1

CR392039.4-201, humanhuman

BASIC

Gene CR392039.4, Length 501 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR392039.4-201ENST00000624968 GCGRP47871 477 aa6.92□□□□□ -1.3
CR392039.4-201ENST00000624968 NUDT18Q6ZVK8 323 aa6.92□□□□□ -1.3
CR392039.4-201ENST00000624968 NFATC2IPQ8NCF5 419 aa6.92□□□□□ -1.3
CR392039.4-201ENST00000624968 SREK1Q8WXA9 508 aaKnown RBP6.92□□□□□ -1.3
CR392039.4-201ENST00000624968 CFAP99D6REC4 459 aa6.91□□□□□ -1.3
CR392039.4-201ENST00000624968 MYT1Q01538 1121 aa6.91□□□□□ -1.3
CR392039.4-201ENST00000624968 ZNF326Q5BKZ1 582 aaKnown RBP6.91□□□□□ -1.3
CR392039.4-201ENST00000624968 SLAIN2Q9P270 581 aa6.91□□□□□ -1.3
CR392039.4-201ENST00000624968 USP17L3A6NCW0 530 aa6.9□□□□□ -1.3
CR392039.4-201ENST00000624968 USP17L4A6NCW7 530 aa6.9□□□□□ -1.3
CR392039.4-201ENST00000624968 FAM196BA6NMK8 535 aa6.9□□□□□ -1.3
CR392039.4-201ENST00000624968 GUCA2AQ02747 115 aa6.9□□□□□ -1.3
CR392039.4-201ENST00000624968 NR6A1Q15406 480 aa6.9□□□□□ -1.3
CR392039.4-201ENST00000624968 USP17L2Q6R6M4 530 aa6.9□□□□□ -1.3
CR392039.4-201ENST00000624968 USP17L1Q7RTZ2 530 aa6.9□□□□□ -1.3
CR392039.4-201ENST00000624968 NPAS4Q8IUM7 802 aa6.9□□□□□ -1.3
CR392039.4-201ENST00000624968 CLP1Q92989 425 aaKnown RBP6.9□□□□□ -1.3
CR392039.4-201ENST00000624968 TSKSQ9UJT2 592 aa6.9□□□□□ -1.3
CR392039.4-201ENST00000624968 MRC2Q9UBG0 1479 aa6.9□□□□□ -1.31
CR392039.4-201ENST00000624968 ANKRD33BA6NCL7 494 aa6.89□□□□□ -1.31
CR392039.4-201ENST00000624968 NBPF26B4DH59 902 aa6.89□□□□□ -1.31
CR392039.4-201ENST00000624968 C3orf80F5H4A9 247 aa6.89□□□□□ -1.31
CR392039.4-201ENST00000624968 PIK3CDO00329 1044 aa6.89□□□□□ -1.31
CR392039.4-201ENST00000624968 SERPINB4P48594 390 aa6.89□□□□□ -1.31
CR392039.4-201ENST00000624968 FAM69CQ0P6D2 419 aa6.89□□□□□ -1.31
CR392039.4-201ENST00000624968 NR1H3Q13133 447 aa6.89□□□□□ -1.31
CR392039.4-201ENST00000624968 C3orf67Q6ZVT6 689 aa6.89□□□□□ -1.31
CR392039.4-201ENST00000624968 PLEKHM2Q8IWE5 1019 aa6.89□□□□□ -1.31
CR392039.4-201ENST00000624968 TATDN2Q93075 761 aa6.89□□□□□ -1.31
CR392039.4-201ENST00000624968 WDR62O43379 1518 aa6.89□□□□□ -1.31
CR392039.4-201ENST00000624968 USP17L15C9J2P7 530 aa6.88□□□□□ -1.31
CR392039.4-201ENST00000624968 USP17L10C9JJH3 530 aa6.88□□□□□ -1.31
CR392039.4-201ENST00000624968 USP17L13C9JLJ4 530 aa6.88□□□□□ -1.31
CR392039.4-201ENST00000624968 USP17L12C9JPN9 530 aa6.88□□□□□ -1.31
CR392039.4-201ENST00000624968 USP17L11C9JVI0 530 aa6.88□□□□□ -1.31
CR392039.4-201ENST00000624968 USP17L21D6R901 530 aa6.88□□□□□ -1.31
CR392039.4-201ENST00000624968 USP17L18D6R9N7 530 aa6.88□□□□□ -1.31
CR392039.4-201ENST00000624968 USP17L22D6RA61 530 aa6.88□□□□□ -1.31
CR392039.4-201ENST00000624968 USP17L17D6RBQ6 530 aa6.88□□□□□ -1.31
CR392039.4-201ENST00000624968 USP17L19D6RCP7 530 aa6.88□□□□□ -1.31
CR392039.4-201ENST00000624968 USP17L20D6RJB6 530 aa6.88□□□□□ -1.31
CR392039.4-201ENST00000624968 ZC3H6P61129 1189 aaKnown RBP6.88□□□□□ -1.31
CR392039.4-201ENST00000624968 USP17L24Q0WX57 530 aa6.88□□□□□ -1.31
CR392039.4-201ENST00000624968 HLA-CQ95604 372 aa6.88□□□□□ -1.31
CR392039.4-201ENST00000624968 BIN2Q9UBW5 565 aaPredicted RBP6.88□□□□□ -1.31
CR392039.4-201ENST00000624968 PNMA3Q9UL41 463 aa6.88□□□□□ -1.31
CR392039.4-201ENST00000624968 LAMC3Q9Y6N6 1575 aa6.87□□□□□ -1.31
CR392039.4-201ENST00000624968 SKIP12755 728 aa6.87□□□□□ -1.31
CR392039.4-201ENST00000624968 COL9A1P20849 921 aa6.87□□□□□ -1.31
CR392039.4-201ENST00000624968 FAM200AQ8TCP9 573 aa6.87□□□□□ -1.31
CR392039.4-201ENST00000624968 SPATA32Q96LK8 384 aa6.87□□□□□ -1.31
CR392039.4-201ENST00000624968 CDCA7Q9BWT1 371 aaPredicted RBP6.87□□□□□ -1.31
CR392039.4-201ENST00000624968 USP17L5A8MUK1 530 aa6.86□□□□□ -1.31
CR392039.4-201ENST00000624968 C6orf229H3BNL8 230 aa6.86□□□□□ -1.31
CR392039.4-201ENST00000624968 PPM1GO15355 546 aaPredicted RBP6.86□□□□□ -1.31
CR392039.4-201ENST00000624968 ATP2B4P23634 1241 aa6.86□□□□□ -1.31
CR392039.4-201ENST00000624968 PTK7Q13308 1070 aa6.86□□□□□ -1.31
CR392039.4-201ENST00000624968 CRTC2Q53ET0 693 aaPredicted RBP6.86□□□□□ -1.31
CR392039.4-201ENST00000624968 LARP1Q6PKG0 1096 aaKnown RBP6.86□□□□□ -1.31
CR392039.4-201ENST00000624968 MKRN1Q9UHC7 482 aaKnown RBP6.86□□□□□ -1.31
CR392039.4-201ENST00000624968 HMGXB3Q12766 1538 aa6.86□□□□□ -1.31
CR392039.4-201ENST00000624968 ZCCHC6Q5VYS8 1495 aaKnown RBP6.85□□□□□ -1.31
CR392039.4-201ENST00000624968 SMARCA5O60264 1052 aaPredicted RBP6.85□□□□□ -1.31
CR392039.4-201ENST00000624968 EIF5BO60841 1220 aaKnown RBP6.85□□□□□ -1.31
CR392039.4-201ENST00000624968 PACS2Q86VP3 889 aa6.85□□□□□ -1.31
CR392039.4-201ENST00000624968 UBXN4Q92575 508 aa6.85□□□□□ -1.31
CR392039.4-201ENST00000624968 CHMP4AQ9BY43 222 aa6.85□□□□□ -1.31
CR392039.4-201ENST00000624968 FBXO45P0C2W1 286 aa6.84□□□□□ -1.31
CR392039.4-201ENST00000624968 RASA1P20936 1047 aa6.84□□□□□ -1.31
CR392039.4-201ENST00000624968 C1orf216Q8TAB5 229 aa6.84□□□□□ -1.31
CR392039.4-201ENST00000624968 KIF21AQ7Z4S6 1674 aa6.84□□□□□ -1.32
CR392039.4-201ENST00000624968 CADPSQ9ULU8 1353 aa6.83□□□□□ -1.32
CR392039.4-201ENST00000624968 ZBBXA8MT70 800 aa6.83□□□□□ -1.32
CR392039.4-201ENST00000624968 TRIM6-TRIM34B2RNG4 842 aa6.83□□□□□ -1.32
CR392039.4-201ENST00000624968 PPP1R3GB7ZBB8 358 aa6.83□□□□□ -1.32
CR392039.4-201ENST00000624968 ATP5J2-PTCD1G3V325 749 aa6.83□□□□□ -1.32
CR392039.4-201ENST00000624968 PER1O15534 1290 aaPredicted RBP6.83□□□□□ -1.32
CR392039.4-201ENST00000624968 RECKO95980 971 aa6.83□□□□□ -1.32
CR392039.4-201ENST00000624968 SLC10A3P09131 477 aa6.83□□□□□ -1.32
CR392039.4-201ENST00000624968 SF3A1Q15459 793 aaKnown RBP6.83□□□□□ -1.32
CR392039.4-201ENST00000624968 SWI5Q1ZZU3 235 aa6.83□□□□□ -1.32
CR392039.4-201ENST00000624968 GRIPAP1Q4V328 841 aa6.83□□□□□ -1.32
CR392039.4-201ENST00000624968 NAALADL2Q58DX5 795 aa6.83□□□□□ -1.32
CR392039.4-201ENST00000624968 FBXO33Q7Z6M2 555 aa6.83□□□□□ -1.32
CR392039.4-201ENST00000624968 ANKMY2Q8IV38 441 aa6.83□□□□□ -1.32
CR392039.4-201ENST00000624968 DEPDC4Q8N2C3 294 aa6.83□□□□□ -1.32
CR392039.4-201ENST00000624968 FAM174AQ8TBP5 190 aa6.82□□□□□ -1.32
CR392039.4-201ENST00000624968 FBXO41Q8TF61 875 aa6.82□□□□□ -1.32
CR392039.4-201ENST00000624968 EGFL7Q9UHF1 273 aa6.82□□□□□ -1.32
CR392039.4-201ENST00000624968 SMAPO00193 183 aa6.81□□□□□ -1.32
CR392039.4-201ENST00000624968 LZTS3O60299 673 aaPredicted RBP6.81□□□□□ -1.32
CR392039.4-201ENST00000624968 NUDT7P0C024 238 aa6.81□□□□□ -1.32
CR392039.4-201ENST00000624968 BCL2L12Q9HB09 334 aa6.81□□□□□ -1.32
CR392039.4-201ENST00000624968 PPP1R1BQ9UD71 204 aaPredicted RBP6.81□□□□□ -1.32
CR392039.4-201ENST00000624968 TTBK1Q5TCY1 1321 aaPredicted RBP6.8□□□□□ -1.32
CR392039.4-201ENST00000624968 SCNN1AP37088 669 aa6.8□□□□□ -1.32
CR392039.4-201ENST00000624968 TAGLNQ01995 201 aaKnown RBP6.8□□□□□ -1.32
CR392039.4-201ENST00000624968 NCOA4Q13772 614 aa6.8□□□□□ -1.32
CR392039.4-201ENST00000624968 ILDR2Q71H61 639 aa6.8□□□□□ -1.32
CR392039.4-201ENST00000624968 SYMPKQ92797 1274 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms