RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 MOXD2PA6NHM9 499 aa8.68□□□□□ -1.02
CDKL5-207ENST00000624700 NDUFV2P19404 249 aa8.68□□□□□ -1.02
CDKL5-207ENST00000624700 PTPRNQ16849 979 aa8.68□□□□□ -1.02
CDKL5-207ENST00000624700 MYSM1Q5VVJ2 828 aa8.68□□□□□ -1.02
CDKL5-207ENST00000624700 SH3BP2P78314 561 aa8.67□□□□□ -1.02
CDKL5-207ENST00000624700 RIC3Q7Z5B4 369 aa8.67□□□□□ -1.02
CDKL5-207ENST00000624700 EVA1BQ9NVM1 165 aa8.67□□□□□ -1.02
CDKL5-207ENST00000624700 SPDYE5A6NIY4 337 aa8.66□□□□□ -1.02
CDKL5-207ENST00000624700 SPTLC1O15269 473 aa8.66□□□□□ -1.02
CDKL5-207ENST00000624700 CLK2P49760 499 aaKnown RBP8.66□□□□□ -1.02
CDKL5-207ENST00000624700 PRR7Q8TB68 274 aa8.66□□□□□ -1.02
CDKL5-207ENST00000624700 WASF2Q9Y6W5 498 aa8.66□□□□□ -1.02
CDKL5-207ENST00000624700 TERTO14746 1132 aaKnown RBP8.65□□□□□ -1.02
CDKL5-207ENST00000624700 MTMR2Q13614 643 aa8.65□□□□□ -1.02
CDKL5-207ENST00000624700 DESI1Q6ICB0 168 aa8.65□□□□□ -1.02
CDKL5-207ENST00000624700 UNC93B1Q9H1C4 597 aa8.65□□□□□ -1.02
CDKL5-207ENST00000624700 POLR3EQ9NVU0 708 aa8.65□□□□□ -1.02
CDKL5-207ENST00000624700 WIPF1O43516 503 aa8.64□□□□□ -1.03
CDKL5-207ENST00000624700 KCNH2Q12809 1159 aa8.64□□□□□ -1.03
CDKL5-207ENST00000624700 BAP1Q92560 729 aa8.63□□□□□ -1.03
CDKL5-207ENST00000624700 CAPN5O15484 640 aaPredicted RBP8.62□□□□□ -1.03
CDKL5-207ENST00000624700 LINC01559Q495D7 138 aa8.62□□□□□ -1.03
CDKL5-207ENST00000624700 PRPF38BQ5VTL8 546 aaKnown RBP8.62□□□□□ -1.03
CDKL5-207ENST00000624700 RSBN1LQ6PCB5 846 aaPredicted RBP8.62□□□□□ -1.03
CDKL5-207ENST00000624700 INSM1Q01101 510 aaPredicted RBP8.61□□□□□ -1.03
CDKL5-207ENST00000624700 FLIIQ13045 1269 aa8.61□□□□□ -1.03
CDKL5-207ENST00000624700 ZNF511Q8NB15 262 aa8.61□□□□□ -1.03
CDKL5-207ENST00000624700 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.61□□□□□ -1.03
CDKL5-207ENST00000624700 VARSP26640 1264 aaKnown RBP8.6□□□□□ -1.03
CDKL5-207ENST00000624700 TMEM259Q4ZIN3 620 aa8.6□□□□□ -1.03
CDKL5-207ENST00000624700 TRIM46Q7Z4K8 759 aa8.6□□□□□ -1.03
CDKL5-207ENST00000624700 PROCA1Q8NCQ7 364 aaPredicted RBP8.6□□□□□ -1.03
CDKL5-207ENST00000624700 BMP1P13497 986 aa8.59□□□□□ -1.03
CDKL5-207ENST00000624700 LCE2CQ5TA81 110 aa8.59□□□□□ -1.03
CDKL5-207ENST00000624700 PPP2R2DQ66LE6 453 aa8.59□□□□□ -1.03
CDKL5-207ENST00000624700 LYPD8Q6UX82 237 aa8.59□□□□□ -1.03
CDKL5-207ENST00000624700 MPNDQ8N594 471 aa8.59□□□□□ -1.03
CDKL5-207ENST00000624700 STK17AQ9UEE5 414 aa8.59□□□□□ -1.03
CDKL5-207ENST00000624700 PCDHB15Q9Y5E8 787 aa8.58□□□□□ -1.04
CDKL5-207ENST00000624700 NUTM2BA6NNL0 878 aaPredicted RBP8.57□□□□□ -1.04
CDKL5-207ENST00000624700 NUTM2EB1AL46 878 aaPredicted RBP8.57□□□□□ -1.04
CDKL5-207ENST00000624700 CTHP32929 405 aa8.57□□□□□ -1.04
CDKL5-207ENST00000624700 NUTM2DQ5VT03 806 aaPredicted RBP8.57□□□□□ -1.04
CDKL5-207ENST00000624700 NUTM2AQ8IVF1 878 aaPredicted RBP8.57□□□□□ -1.04
CDKL5-207ENST00000624700 BANK1Q8NDB2 785 aa8.57□□□□□ -1.04
CDKL5-207ENST00000624700 SLC16A10Q8TF71 515 aa8.57□□□□□ -1.04
CDKL5-207ENST00000624700 ZBTB3Q9H5J0 574 aa8.57□□□□□ -1.04
CDKL5-207ENST00000624700 LIMD1Q9UGP4 676 aa8.57□□□□□ -1.04
CDKL5-207ENST00000624700 TLL2Q9Y6L7 1015 aa8.57□□□□□ -1.04
CDKL5-207ENST00000624700 LILRB3O75022 631 aa8.56□□□□□ -1.04
CDKL5-207ENST00000624700 NXF1Q9UBU9 619 aaKnown RBP8.56□□□□□ -1.04
CDKL5-207ENST00000624700 CFAP99D6REC4 459 aa8.55□□□□□ -1.04
CDKL5-207ENST00000624700 HRCP23327 699 aa8.55□□□□□ -1.04
CDKL5-207ENST00000624700 NNTQ13423 1086 aa8.55□□□□□ -1.04
CDKL5-207ENST00000624700 C14orf37Q86TY3 774 aa8.54□□□□□ -1.04
CDKL5-207ENST00000624700 NPAS3Q8IXF0 933 aa8.54□□□□□ -1.04
CDKL5-207ENST00000624700 FAM174AQ8TBP5 190 aa8.54□□□□□ -1.04
CDKL5-207ENST00000624700 RFC5P40937 340 aa8.53□□□□□ -1.04
CDKL5-207ENST00000624700 ZFP42Q96MM3 310 aa8.53□□□□□ -1.04
CDKL5-207ENST00000624700 APBB1O00213 710 aa8.52□□□□□ -1.05
CDKL5-207ENST00000624700 CSPP1Q1MSJ5 1256 aa8.52□□□□□ -1.05
CDKL5-207ENST00000624700 MAP10Q9P2G4 905 aa8.52□□□□□ -1.05
CDKL5-207ENST00000624700 ADH1CP00326 375 aa8.51□□□□□ -1.05
CDKL5-207ENST00000624700 F12P00748 615 aaPredicted RBP8.51□□□□□ -1.05
CDKL5-207ENST00000624700 WDR4P57081 412 aaKnown RBP8.51□□□□□ -1.05
CDKL5-207ENST00000624700 CABLES1Q8TDN4 633 aa8.51□□□□□ -1.05
CDKL5-207ENST00000624700 CDK15Q96Q40 435 aa8.51□□□□□ -1.05
CDKL5-207ENST00000624700 SOCS7O14512 581 aa8.5□□□□□ -1.05
CDKL5-207ENST00000624700 TIMP2P16035 220 aa8.5□□□□□ -1.05
CDKL5-207ENST00000624700 SCARF1Q14162 830 aa8.5□□□□□ -1.05
CDKL5-207ENST00000624700 MRPL14Q6P1L8 145 aaKnown RBP8.5□□□□□ -1.05
CDKL5-207ENST00000624700 FOXJ1Q92949 421 aa8.5□□□□□ -1.05
CDKL5-207ENST00000624700 IRF7Q92985 503 aa8.5□□□□□ -1.05
CDKL5-207ENST00000624700 PRM3Q9NNZ6 103 aa8.5□□□□□ -1.05
CDKL5-207ENST00000624700 H3BM21 787 aa8.49□□□□□ -1.05
CDKL5-207ENST00000624700 QPCTQ16769 361 aa8.49□□□□□ -1.05
CDKL5-207ENST00000624700 HELBQ8NG08 1087 aaPredicted RBP8.49□□□□□ -1.05
CDKL5-207ENST00000624700 KLF16Q9BXK1 252 aaPredicted RBP8.49□□□□□ -1.05
CDKL5-207ENST00000624700 GMPRP36959 345 aa8.48□□□□□ -1.05
CDKL5-207ENST00000624700 ARID5BQ14865 1188 aa8.48□□□□□ -1.05
CDKL5-207ENST00000624700 AGERQ15109 404 aa8.48□□□□□ -1.05
CDKL5-207ENST00000624700 RTL5Q5HYW3 569 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-207ENST00000624700 PER1O15534 1290 aaPredicted RBP8.47□□□□□ -1.05
CDKL5-207ENST00000624700 VEGFBP49765 207 aa8.47□□□□□ -1.05
CDKL5-207ENST00000624700 BPHLQ86WA6 291 aaPredicted RBP8.47□□□□□ -1.05
CDKL5-207ENST00000624700 PURBQ96QR8 312 aaKnown RBP8.47□□□□□ -1.05
CDKL5-207ENST00000624700 NR5A1Q13285 461 aa8.46□□□□□ -1.06
CDKL5-207ENST00000624700 ARMC2Q8NEN0 867 aa8.46□□□□□ -1.06
CDKL5-207ENST00000624700 TSC1Q92574 1164 aa8.46□□□□□ -1.06
CDKL5-207ENST00000624700 ZMYND15Q9H091 742 aa8.46□□□□□ -1.06
CDKL5-207ENST00000624700 FAM181BA6NEQ2 426 aa8.45□□□□□ -1.06
CDKL5-207ENST00000624700 AP1G2O75843 785 aa8.45□□□□□ -1.06
CDKL5-207ENST00000624700 ZIC2O95409 532 aaPredicted RBP8.45□□□□□ -1.06
CDKL5-207ENST00000624700 C4orf48Q5BLP8 95 aa8.45□□□□□ -1.06
CDKL5-207ENST00000624700 TIMELESSQ9UNS1 1208 aa8.45□□□□□ -1.06
CDKL5-207ENST00000624700 RAD21O60216 631 aa8.44□□□□□ -1.06
CDKL5-207ENST00000624700 UBTFP17480 764 aaKnown RBP8.44□□□□□ -1.06
CDKL5-207ENST00000624700 GRM5P41594 1212 aa8.44□□□□□ -1.06
CDKL5-207ENST00000624700 NR3C2P08235 984 aa8.43□□□□□ -1.06
CDKL5-207ENST00000624700 MCM6Q14566 821 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms