RNA–Protein interactions for RNA: ENST00000624390.1

LINC00963-219, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 472 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-219ENST00000624390 SBNO2Q9Y2G9 1366 aa11.7□□□□□ -0.54
LINC00963-219ENST00000624390 SLC12A5Q9H2X9 1139 aa11.7□□□□□ -0.54
LINC00963-219ENST00000624390 USP21Q9UK80 565 aa11.7□□□□□ -0.54
LINC00963-219ENST00000624390 SHPRHQ149N8 1683 aa11.7□□□□□ -0.54
LINC00963-219ENST00000624390 QRICH2Q9H0J4 1663 aa11.69□□□□□ -0.54
LINC00963-219ENST00000624390 RXRBP28702 533 aa11.69□□□□□ -0.54
LINC00963-219ENST00000624390 EIF4G2P78344 907 aaKnown RBP eCLIP11.69□□□□□ -0.541e-7■■■■□ 25.4
LINC00963-219ENST00000624390 HDGFL2Q7Z4V5 671 aaPredicted RBP11.69□□□□□ -0.54
LINC00963-219ENST00000624390 POLR3GLQ9BT43 218 aa11.69□□□□□ -0.54
LINC00963-219ENST00000624390 RGPD8O14715 1765 aaPredicted RBP11.69□□□□□ -0.54
LINC00963-219ENST00000624390 NLRP6P59044 892 aa11.68□□□□□ -0.54
LINC00963-219ENST00000624390 CDCA8Q53HL2 280 aa11.68□□□□□ -0.54
LINC00963-219ENST00000624390 NLRP13Q86W25 1043 aa11.68□□□□□ -0.54
LINC00963-219ENST00000624390 PUS7Q96PZ0 661 aaKnown RBP11.68□□□□□ -0.54
LINC00963-219ENST00000624390 FAM83GA6ND36 823 aa11.67□□□□□ -0.54
LINC00963-219ENST00000624390 HSPA5P11021 654 aaKnown RBP11.67□□□□□ -0.54
LINC00963-219ENST00000624390 ZC3H6P61129 1189 aaKnown RBP11.67□□□□□ -0.54
LINC00963-219ENST00000624390 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC00963-219ENST00000624390 FNBP4Q8N3X1 1017 aaPredicted RBP11.67□□□□□ -0.54
LINC00963-219ENST00000624390 TERF2IPQ9NYB0 399 aa11.67□□□□□ -0.54
LINC00963-219ENST00000624390 KTN1Q86UP2 1357 aaKnown RBP11.67□□□□□ -0.54
LINC00963-219ENST00000624390 TTC21BQ7Z4L5 1316 aa11.66□□□□□ -0.54
LINC00963-219ENST00000624390 ZBTB7CA1YPR0 619 aa11.66□□□□□ -0.54
LINC00963-219ENST00000624390 TRPC5Q9UL62 973 aaPredicted RBP11.66□□□□□ -0.54
LINC00963-219ENST00000624390 UNC5CLQ8IV45 518 aa11.65□□□□□ -0.54
LINC00963-219ENST00000624390 PRDM11Q9NQV5 511 aa11.65□□□□□ -0.54
LINC00963-219ENST00000624390 CCDC9Q9Y3X0 531 aaKnown RBP11.65□□□□□ -0.54
LINC00963-219ENST00000624390 USP6P35125 1406 aa11.65□□□□□ -0.54
LINC00963-219ENST00000624390 BRD4O60885 1362 aaPredicted RBP11.65□□□□□ -0.55
LINC00963-219ENST00000624390 SOX12O15370 315 aa11.64□□□□□ -0.55
LINC00963-219ENST00000624390 RBM6P78332 1123 aaKnown RBP11.64□□□□□ -0.55
LINC00963-219ENST00000624390 CHRNA2Q15822 529 aa11.64□□□□□ -0.55
LINC00963-219ENST00000624390 BTG4Q9NY30 223 aa11.64□□□□□ -0.55
LINC00963-219ENST00000624390 SOCS7O14512 581 aa11.63□□□□□ -0.55
LINC00963-219ENST00000624390 GCP02774 474 aa11.63□□□□□ -0.55
LINC00963-219ENST00000624390 TTC21AQ8NDW8 1320 aa11.62□□□□□ -0.55
LINC00963-219ENST00000624390 COL22A1Q8NFW1 1626 aaPredicted RBP11.62□□□□□ -0.55
LINC00963-219ENST00000624390 NME9Q86XW9 330 aa11.62□□□□□ -0.55
LINC00963-219ENST00000624390 ZRANB1Q9UGI0 708 aa11.62□□□□□ -0.55
LINC00963-219ENST00000624390 ITSN1Q15811 1721 aa11.62□□□□□ -0.55
LINC00963-219ENST00000624390 CPSF1Q10570 1443 aaKnown RBP11.61□□□□□ -0.55
LINC00963-219ENST00000624390 EVA1CP58658 441 aa11.61□□□□□ -0.55
LINC00963-219ENST00000624390 GJD4Q96KN9 370 aaPredicted RBP11.61□□□□□ -0.55
LINC00963-219ENST00000624390 KIAA0232Q92628 1395 aa11.61□□□□□ -0.55
LINC00963-219ENST00000624390 TOPAZ1Q8N9V7 1692 aa11.6□□□□□ -0.55
LINC00963-219ENST00000624390 BCL9LQ86UU0 1499 aa11.6□□□□□ -0.55
LINC00963-219ENST00000624390 A0A1W2PP64 1363 aa11.6□□□□□ -0.55
LINC00963-219ENST00000624390 STRN4Q9NRL3 753 aa11.6□□□□□ -0.55
LINC00963-219ENST00000624390 SSH2Q76I76 1423 aa11.6□□□□□ -0.55
LINC00963-219ENST00000624390 USP19O94966 1318 aa11.6□□□□□ -0.55
LINC00963-219ENST00000624390 NINLQ9Y2I6 1382 aa11.59□□□□□ -0.55
LINC00963-219ENST00000624390 VPS72Q15906 364 aa11.59□□□□□ -0.55
LINC00963-219ENST00000624390 KCNH5Q8NCM2 988 aa11.59□□□□□ -0.55
LINC00963-219ENST00000624390 TRPM3Q9HCF6 1732 aaPredicted RBP11.59□□□□□ -0.55
LINC00963-219ENST00000624390 A0A0G2JS52 829 aa11.58□□□□□ -0.56
LINC00963-219ENST00000624390 MYT1Q01538 1121 aa11.58□□□□□ -0.56
LINC00963-219ENST00000624390 SLIT2O94813 1529 aa11.58□□□□□ -0.56
LINC00963-219ENST00000624390 ATRNO75882 1429 aa11.58□□□□□ -0.56
LINC00963-219ENST00000624390 CD163L1Q9NR16 1453 aa11.57□□□□□ -0.56
LINC00963-219ENST00000624390 COG3Q96JB2 828 aa11.57□□□□□ -0.56
LINC00963-219ENST00000624390 ANKRD36BQ8N2N9 1353 aa11.56□□□□□ -0.56
LINC00963-219ENST00000624390 ALS2Q96Q42 1657 aa11.56□□□□□ -0.56
LINC00963-219ENST00000624390 C11orf95C9JLR9 678 aaPredicted RBP11.56□□□□□ -0.56
LINC00963-219ENST00000624390 EDC4Q6P2E9 1401 aaKnown RBP11.56□□□□□ -0.56
LINC00963-219ENST00000624390 USP35Q9P2H5 1018 aa11.56□□□□□ -0.56
LINC00963-219ENST00000624390 GGNBP2Q9H3C7 697 aa11.55□□□□□ -0.56
LINC00963-219ENST00000624390 CPDO75976 1380 aa11.54□□□□□ -0.56
LINC00963-219ENST00000624390 FYB1O15117 783 aa11.54□□□□□ -0.56
LINC00963-219ENST00000624390 CSB-PGBD3P0DP91 1061 aa11.54□□□□□ -0.56
LINC00963-219ENST00000624390 FAM98CQ17RN3 349 aaKnown RBP11.54□□□□□ -0.56
LINC00963-219ENST00000624390 LARP1Q6PKG0 1096 aaKnown RBP11.54□□□□□ -0.56
LINC00963-219ENST00000624390 ARHGEF25Q86VW2 580 aa11.54□□□□□ -0.56
LINC00963-219ENST00000624390 SEPT12Q8IYM1 358 aa11.54□□□□□ -0.56
LINC00963-219ENST00000624390 CARD14Q9BXL6 1004 aa11.54□□□□□ -0.56
LINC00963-219ENST00000624390 PANK3Q9H999 370 aa11.54□□□□□ -0.56
LINC00963-219ENST00000624390 USP31Q70CQ4 1352 aa11.54□□□□□ -0.56
LINC00963-219ENST00000624390 AXIN2Q9Y2T1 843 aa11.53□□□□□ -0.56
LINC00963-219ENST00000624390 SPATA31A5Q5VU36 1347 aa11.53□□□□□ -0.56
LINC00963-219ENST00000624390 SPATA31A7Q8IWB4 1347 aa11.53□□□□□ -0.56
LINC00963-219ENST00000624390 FBLN1P23142 703 aa11.52□□□□□ -0.57
LINC00963-219ENST00000624390 TOM1L2Q6ZVM7 507 aa11.52□□□□□ -0.57
LINC00963-219ENST00000624390 AATKQ6ZMQ8 1374 aa11.52□□□□□ -0.57
LINC00963-219ENST00000624390 RGS12O14924 1447 aa11.52□□□□□ -0.57
LINC00963-219ENST00000624390 SPATA31A1Q5TZJ5 1347 aa11.51□□□□□ -0.57
LINC00963-219ENST00000624390 NSD3Q9BZ95 1437 aa11.51□□□□□ -0.57
LINC00963-219ENST00000624390 CDK12Q9NYV4 1490 aaPredicted RBP11.51□□□□□ -0.57
LINC00963-219ENST00000624390 ONECUT3O60422 494 aaPredicted RBP11.5□□□□□ -0.57
LINC00963-219ENST00000624390 AMPHP49418 695 aa11.5□□□□□ -0.57
LINC00963-219ENST00000624390 TCP11L2Q8N4U5 519 aa11.5□□□□□ -0.57
LINC00963-219ENST00000624390 LTV1Q96GA3 475 aaPredicted RBP11.5□□□□□ -0.57
LINC00963-219ENST00000624390 KIF7Q2M1P5 1343 aa11.5□□□□□ -0.57
LINC00963-219ENST00000624390 COL14A1Q05707 1796 aaKnown RBP11.49□□□□□ -0.57
LINC00963-219ENST00000624390 KRT27Q7Z3Y8 459 aa11.49□□□□□ -0.57
LINC00963-219ENST00000624390 CGNL1Q0VF96 1302 aa11.49□□□□□ -0.57
LINC00963-219ENST00000624390 SLIT3O75094 1523 aa11.49□□□□□ -0.57
LINC00963-219ENST00000624390 NRKQ7Z2Y5 1582 aa11.49□□□□□ -0.57
LINC00963-219ENST00000624390 PIK3C2AO00443 1686 aa11.49□□□□□ -0.57
LINC00963-219ENST00000624390 TNNT2P45379 298 aaPredicted RBP11.48□□□□□ -0.57
LINC00963-219ENST00000624390 RRS1Q15050 365 aaKnown RBP11.48□□□□□ -0.57
LINC00963-219ENST00000624390 UPF1Q92900 1129 aaKnown RBP eCLIP11.48□□□□□ -0.572e-6■■■□□ 15.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms