RNA–Protein interactions for RNA: ENST00000623787.3

TRIM49D2-202, Transcript of tripartite motif containing 49D2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM49D2, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D2-202ENST00000623787 RRP7AQ9Y3A4 280 aaKnown RBP11.27□□□□□ -0.6
TRIM49D2-202ENST00000623787 FAM135BQ49AJ0 1406 aa11.27□□□□□ -0.61
TRIM49D2-202ENST00000623787 RIMS2Q9UQ26 1411 aa11.27□□□□□ -0.61
TRIM49D2-202ENST00000623787 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.27□□□□□ -0.61
TRIM49D2-202ENST00000623787 N4BP2Q86UW6 1770 aaPredicted RBP11.27□□□□□ -0.61
TRIM49D2-202ENST00000623787 CT47B1P0C2W7 299 aaPredicted RBP11.27□□□□□ -0.61
TRIM49D2-202ENST00000623787 PANK1Q8TE04 598 aa11.27□□□□□ -0.61
TRIM49D2-202ENST00000623787 MAPK8IP3Q9UPT6 1336 aa11.27□□□□□ -0.61
TRIM49D2-202ENST00000623787 TECPR2O15040 1411 aa11.26□□□□□ -0.61
TRIM49D2-202ENST00000623787 CDK12Q9NYV4 1490 aaPredicted RBP11.26□□□□□ -0.61
TRIM49D2-202ENST00000623787 IL16Q14005 1332 aa11.26□□□□□ -0.61
TRIM49D2-202ENST00000623787 PPIP5K1Q6PFW1 1433 aa11.26□□□□□ -0.61
TRIM49D2-202ENST00000623787 MYH16Q9H6N6 1097 aa11.26□□□□□ -0.61
TRIM49D2-202ENST00000623787 USP35Q9P2H5 1018 aa11.26□□□□□ -0.61
TRIM49D2-202ENST00000623787 USP54Q70EL1 1684 aa11.25□□□□□ -0.61
TRIM49D2-202ENST00000623787 CPSF1Q10570 1443 aaKnown RBP11.25□□□□□ -0.61
TRIM49D2-202ENST00000623787 FYB1O15117 783 aa11.25□□□□□ -0.61
TRIM49D2-202ENST00000623787 PPM1GO15355 546 aaPredicted RBP11.25□□□□□ -0.61
TRIM49D2-202ENST00000623787 PRAM1Q96QH2 718 aa11.25□□□□□ -0.61
TRIM49D2-202ENST00000623787 TERF2IPQ9NYB0 399 aa11.25□□□□□ -0.61
TRIM49D2-202ENST00000623787 COG6Q9Y2V7 657 aa11.25□□□□□ -0.61
TRIM49D2-202ENST00000623787 MINK1Q8N4C8 1332 aaPredicted RBP11.24□□□□□ -0.61
TRIM49D2-202ENST00000623787 SRPK2P78362 688 aaKnown RBP11.24□□□□□ -0.61
TRIM49D2-202ENST00000623787 MARF1Q9Y4F3 1742 aaKnown RBP11.24□□□□□ -0.61
TRIM49D2-202ENST00000623787 USP19O94966 1318 aa11.24□□□□□ -0.61
TRIM49D2-202ENST00000623787 U2AF1L5P0DN76 240 aaPredicted RBP11.24□□□□□ -0.61
TRIM49D2-202ENST00000623787 RLBP1P12271 317 aa11.24□□□□□ -0.61
TRIM49D2-202ENST00000623787 CANXP27824 592 aaKnown RBP11.24□□□□□ -0.61
TRIM49D2-202ENST00000623787 U2AF1Q01081 240 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRIM49D2-202ENST00000623787 NEUROD2Q15784 382 aa11.24□□□□□ -0.61
TRIM49D2-202ENST00000623787 RTL5Q5HYW3 569 aaPredicted RBP11.24□□□□□ -0.61
TRIM49D2-202ENST00000623787 FBXO31Q5XUX0 539 aaPredicted RBP11.24□□□□□ -0.61
TRIM49D2-202ENST00000623787 PMFBP1Q8TBY8 1022 aa11.24□□□□□ -0.61
TRIM49D2-202ENST00000623787 EDC4Q6P2E9 1401 aaKnown RBP11.23□□□□□ -0.61
TRIM49D2-202ENST00000623787 PEAK1Q9H792 1746 aa11.23□□□□□ -0.61
TRIM49D2-202ENST00000623787 TMPOP42166 694 aaKnown RBP11.23□□□□□ -0.61
TRIM49D2-202ENST00000623787 RGS3P49796 1198 aa11.23□□□□□ -0.61
TRIM49D2-202ENST00000623787 SAFB2Q14151 953 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRIM49D2-202ENST00000623787 GGNBP2Q9H3C7 697 aa11.23□□□□□ -0.61
TRIM49D2-202ENST00000623787 STK26Q9P289 416 aa11.23□□□□□ -0.61
TRIM49D2-202ENST00000623787 TRIM35Q9UPQ4 493 aa11.23□□□□□ -0.61
TRIM49D2-202ENST00000623787 TUBGCP6Q96RT7 1819 aa11.23□□□□□ -0.61
TRIM49D2-202ENST00000623787 TNNQ9UQP3 1299 aa11.22□□□□□ -0.61
TRIM49D2-202ENST00000623787 FER1L4A9Z1Z3 1794 aa11.21□□□□□ -0.61
TRIM49D2-202ENST00000623787 HDGFL2Q7Z4V5 671 aaPredicted RBP11.21□□□□□ -0.61
TRIM49D2-202ENST00000623787 MVPQ14764 893 aaKnown RBP11.2□□□□□ -0.62
TRIM49D2-202ENST00000623787 CDK19Q9BWU1 502 aa11.2□□□□□ -0.62
TRIM49D2-202ENST00000623787 POGKQ9P215 609 aa11.2□□□□□ -0.62
TRIM49D2-202ENST00000623787 PCDHB15Q9Y5E8 787 aa11.2□□□□□ -0.62
TRIM49D2-202ENST00000623787 ZKSCAN2Q63HK3 967 aa11.2□□□□□ -0.62
TRIM49D2-202ENST00000623787 FRAT1Q92837 279 aaPredicted RBP11.2□□□□□ -0.62
TRIM49D2-202ENST00000623787 LAS1LQ9Y4W2 734 aaKnown RBP11.2□□□□□ -0.62
TRIM49D2-202ENST00000623787 AATKQ6ZMQ8 1374 aa11.19□□□□□ -0.62
TRIM49D2-202ENST00000623787 DIAPH1O60610 1272 aaKnown RBP11.18□□□□□ -0.62
TRIM49D2-202ENST00000623787 FAM69CQ0P6D2 419 aa11.18□□□□□ -0.62
TRIM49D2-202ENST00000623787 PTCH1Q13635 1447 aa11.18□□□□□ -0.62
TRIM49D2-202ENST00000623787 LRRC37A3O60309 1634 aa11.17□□□□□ -0.62
TRIM49D2-202ENST00000623787 NEFMP07197 916 aa11.17□□□□□ -0.62
TRIM49D2-202ENST00000623787 EXOSC9Q06265 439 aaKnown RBP11.17□□□□□ -0.62
TRIM49D2-202ENST00000623787 TSR2Q969E8 191 aaKnown RBP11.17□□□□□ -0.62
TRIM49D2-202ENST00000623787 BCL2L13Q9BXK5 485 aa11.17□□□□□ -0.62
TRIM49D2-202ENST00000623787 PNNQ9H307 717 aaKnown RBP11.17□□□□□ -0.62
TRIM49D2-202ENST00000623787 XRN1Q8IZH2 1706 aaKnown RBP11.17□□□□□ -0.62
TRIM49D2-202ENST00000623787 FAM208AQ9UK61 1670 aaKnown RBP11.17□□□□□ -0.62
TRIM49D2-202ENST00000623787 U2SURPO15042 1029 aaKnown RBP11.17□□□□□ -0.62
TRIM49D2-202ENST00000623787 DZIP1LQ8IYY4 767 aaKnown RBP11.17□□□□□ -0.62
TRIM49D2-202ENST00000623787 RSPH6AQ9H0K4 717 aa11.17□□□□□ -0.62
TRIM49D2-202ENST00000623787 PDZRN3Q9UPQ7 1066 aa11.17□□□□□ -0.62
TRIM49D2-202ENST00000623787 METP08581 1390 aa11.16□□□□□ -0.62
TRIM49D2-202ENST00000623787 PIK3R4Q99570 1358 aa11.16□□□□□ -0.62
TRIM49D2-202ENST00000623787 FCHSD2O94868 740 aa11.16□□□□□ -0.62
TRIM49D2-202ENST00000623787 CYB5RLQ6IPT4 315 aa11.16□□□□□ -0.62
TRIM49D2-202ENST00000623787 RWDD1Q9H446 243 aaPredicted RBP11.16□□□□□ -0.62
TRIM49D2-202ENST00000623787 CABP1Q9NZU7 370 aa11.16□□□□□ -0.62
TRIM49D2-202ENST00000623787 PIK3C2AO00443 1686 aa11.15□□□□□ -0.62
TRIM49D2-202ENST00000623787 TRIM27P14373 513 aa11.15□□□□□ -0.62
TRIM49D2-202ENST00000623787 BRPF1P55201 1214 aaPredicted RBP11.15□□□□□ -0.62
TRIM49D2-202ENST00000623787 SSH1Q8WYL5 1049 aa11.15□□□□□ -0.62
TRIM49D2-202ENST00000623787 SIRT1Q96EB6 747 aa11.15□□□□□ -0.62
TRIM49D2-202ENST00000623787 KIF16BQ96L93 1317 aa11.15□□□□□ -0.62
TRIM49D2-202ENST00000623787 DIP2AQ14689 1571 aa11.15□□□□□ -0.62
TRIM49D2-202ENST00000623787 HDAC1Q13547 482 aaPredicted RBP11.14□□□□□ -0.63
TRIM49D2-202ENST00000623787 ALDH1L2Q3SY69 923 aa11.14□□□□□ -0.63
TRIM49D2-202ENST00000623787 SMC4Q9NTJ3 1288 aa11.14□□□□□ -0.63
TRIM49D2-202ENST00000623787 POLKQ9UBT6 870 aa11.14□□□□□ -0.63
TRIM49D2-202ENST00000623787 LTN1O94822 1766 aa11.14□□□□□ -0.63
TRIM49D2-202ENST00000623787 ADAMTS13Q76LX8 1427 aa11.14□□□□□ -0.63
TRIM49D2-202ENST00000623787 AK9Q5TCS8 1911 aa11.14□□□□□ -0.63
TRIM49D2-202ENST00000623787 SEC24BO95487 1268 aa11.14□□□□□ -0.63
TRIM49D2-202ENST00000623787 RIPK4P57078 832 aa11.14□□□□□ -0.63
TRIM49D2-202ENST00000623787 NFKBIBQ15653 356 aa11.14□□□□□ -0.63
TRIM49D2-202ENST00000623787 ATF7IPQ6VMQ6 1270 aa11.14□□□□□ -0.63
TRIM49D2-202ENST00000623787 STAG3Q9UJ98 1225 aa11.14□□□□□ -0.63
TRIM49D2-202ENST00000623787 DDX19BQ9UMR2 479 aa11.14□□□□□ -0.63
TRIM49D2-202ENST00000623787 OVOS2A0A0J9YW53 1432 aa11.13□□□□□ -0.63
TRIM49D2-202ENST00000623787 WASLO00401 505 aaPredicted RBP11.13□□□□□ -0.63
TRIM49D2-202ENST00000623787 OVOS2Q6IE36 1432 aa11.13□□□□□ -0.63
TRIM49D2-202ENST00000623787 WAPLQ7Z5K2 1190 aa11.13□□□□□ -0.63
TRIM49D2-202ENST00000623787 FTSJ3Q8IY81 847 aaKnown RBP11.13□□□□□ -0.63
TRIM49D2-202ENST00000623787 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms