RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 MYO5BQ9ULV0 1848 aa17.14■□□□□ 0.33
PCDHB17P-202ENST00000623466 HSP90AA2PQ14568 343 aaPredicted RBP17.14■□□□□ 0.33
PCDHB17P-202ENST00000623466 SLKQ9H2G2 1235 aaPredicted RBP17.14■□□□□ 0.33
PCDHB17P-202ENST00000623466 POLR3AO14802 1390 aaPredicted RBP17.14■□□□□ 0.33
PCDHB17P-202ENST00000623466 ARHGAP31Q2M1Z3 1444 aa17.13■□□□□ 0.33
PCDHB17P-202ENST00000623466 YTHDC2Q9H6S0 1430 aaKnown RBP17.13■□□□□ 0.33
PCDHB17P-202ENST00000623466 REREQ9P2R6 1566 aa17.13■□□□□ 0.33
PCDHB17P-202ENST00000623466 ANKRD36BQ8N2N9 1353 aa17.12■□□□□ 0.33
PCDHB17P-202ENST00000623466 USP19O94966 1318 aa17.12■□□□□ 0.33
PCDHB17P-202ENST00000623466 TERF2IPQ9NYB0 399 aa17.11■□□□□ 0.33
PCDHB17P-202ENST00000623466 NKTRP30414 1462 aaKnown RBP17.11■□□□□ 0.33
PCDHB17P-202ENST00000623466 PREX1Q8TCU6 1659 aa17.1■□□□□ 0.33
PCDHB17P-202ENST00000623466 SOX12O15370 315 aa17.09■□□□□ 0.33
PCDHB17P-202ENST00000623466 AGLP35573 1532 aa17.08■□□□□ 0.33
PCDHB17P-202ENST00000623466 HMOX1P09601 288 aa17.08■□□□□ 0.33
PCDHB17P-202ENST00000623466 HDGFL2Q7Z4V5 671 aaPredicted RBP17.08■□□□□ 0.33
PCDHB17P-202ENST00000623466 ARXQ96QS3 562 aa17.08■□□□□ 0.32
PCDHB17P-202ENST00000623466 ARHGEF28Q8N1W1 1705 aaKnown RBP17.07■□□□□ 0.32
PCDHB17P-202ENST00000623466 SLC26A8Q96RN1 970 aa17.07■□□□□ 0.32
PCDHB17P-202ENST00000623466 METP08581 1390 aa17.07■□□□□ 0.32
PCDHB17P-202ENST00000623466 ZMYM3Q14202 1370 aa17.07■□□□□ 0.32
PCDHB17P-202ENST00000623466 RLBP1P12271 317 aa17.07■□□□□ 0.32
PCDHB17P-202ENST00000623466 NME9Q86XW9 330 aa17.07■□□□□ 0.32
PCDHB17P-202ENST00000623466 NAP1L5Q96NT1 182 aaPredicted RBP17.06■□□□□ 0.32
PCDHB17P-202ENST00000623466 RIMS2Q9UQ26 1411 aa17.05■□□□□ 0.32
PCDHB17P-202ENST00000623466 RBM10P98175 930 aaKnown RBP17.05■□□□□ 0.32
PCDHB17P-202ENST00000623466 TMEM131LA2VDJ0 1609 aa17.05■□□□□ 0.32
PCDHB17P-202ENST00000623466 PTPRMP28827 1452 aa17.05■□□□□ 0.32
PCDHB17P-202ENST00000623466 SPRYD3Q8NCJ5 442 aa17.05■□□□□ 0.32
PCDHB17P-202ENST00000623466 EMILIN1Q9Y6C2 1016 aa17.05■□□□□ 0.32
PCDHB17P-202ENST00000623466 THUMPD2Q9BTF0 503 aaKnown RBP17.05■□□□□ 0.32
PCDHB17P-202ENST00000623466 RARSP54136 660 aaKnown RBP17.04■□□□□ 0.32
PCDHB17P-202ENST00000623466 RRS1Q15050 365 aaKnown RBP17.04■□□□□ 0.32
PCDHB17P-202ENST00000623466 RIPK4P57078 832 aa17.03■□□□□ 0.32
PCDHB17P-202ENST00000623466 PCDHB15Q9Y5E8 787 aa17.02■□□□□ 0.32
PCDHB17P-202ENST00000623466 A2ML1A8K2U0 1454 aa17.02■□□□□ 0.32
PCDHB17P-202ENST00000623466 DIAPH1O60610 1272 aaKnown RBP17.02■□□□□ 0.32
PCDHB17P-202ENST00000623466 TMPOP42166 694 aaKnown RBP17.02■□□□□ 0.32
PCDHB17P-202ENST00000623466 EXOSC9Q06265 439 aaKnown RBP17.02■□□□□ 0.32
PCDHB17P-202ENST00000623466 PDE3AQ14432 1141 aa17.02■□□□□ 0.32
PCDHB17P-202ENST00000623466 ALKQ9UM73 1620 aa17.02■□□□□ 0.31
PCDHB17P-202ENST00000623466 ABCC11Q96J66 1382 aa17.02■□□□□ 0.31
PCDHB17P-202ENST00000623466 HSP90AA1P07900 732 aaKnown RBP17.02■□□□□ 0.31
PCDHB17P-202ENST00000623466 ZFYVE9O95405 1425 aa17.01■□□□□ 0.31
PCDHB17P-202ENST00000623466 MAPK8IP3Q9UPT6 1336 aa17.01■□□□□ 0.31
PCDHB17P-202ENST00000623466 RRAGDQ9NQL2 400 aaPredicted RBP17.01■□□□□ 0.31
PCDHB17P-202ENST00000623466 ATAD2Q6PL18 1390 aa17.01■□□□□ 0.31
PCDHB17P-202ENST00000623466 POLKQ9UBT6 870 aa17.01■□□□□ 0.31
PCDHB17P-202ENST00000623466 CLTCQ00610 1675 aaKnown RBP17.01■□□□□ 0.31
PCDHB17P-202ENST00000623466 ELL2O00472 640 aaPredicted RBP17■□□□□ 0.31
PCDHB17P-202ENST00000623466 RRP9O43818 475 aaKnown RBP17■□□□□ 0.31
PCDHB17P-202ENST00000623466 LTKP29376 864 aa17■□□□□ 0.31
PCDHB17P-202ENST00000623466 NUDT16Q96DE0 195 aaKnown RBP17■□□□□ 0.31
PCDHB17P-202ENST00000623466 TRIM35Q9UPQ4 493 aa17■□□□□ 0.31
PCDHB17P-202ENST00000623466 WASLO00401 505 aaPredicted RBP17■□□□□ 0.31
PCDHB17P-202ENST00000623466 BECN1Q14457 450 aa17■□□□□ 0.31
PCDHB17P-202ENST00000623466 PHACTR3Q96KR7 559 aa17■□□□□ 0.31
PCDHB17P-202ENST00000623466 PUS7Q96PZ0 661 aaKnown RBP17■□□□□ 0.31
PCDHB17P-202ENST00000623466 PLEKHF1Q96S99 279 aa17■□□□□ 0.31
PCDHB17P-202ENST00000623466 CD163L1Q9NR16 1453 aa16.99■□□□□ 0.31
PCDHB17P-202ENST00000623466 PRKAR2BP31323 418 aa16.99■□□□□ 0.31
PCDHB17P-202ENST00000623466 USP32Q8NFA0 1604 aa16.98■□□□□ 0.31
PCDHB17P-202ENST00000623466 PPP6R1Q9UPN7 881 aa16.98■□□□□ 0.31
PCDHB17P-202ENST00000623466 WDR63Q8IWG1 891 aa16.98■□□□□ 0.31
PCDHB17P-202ENST00000623466 PDZRN3Q9UPQ7 1066 aa16.98■□□□□ 0.31
PCDHB17P-202ENST00000623466 PHF23Q9BUL5 403 aaPredicted RBP16.97■□□□□ 0.31
PCDHB17P-202ENST00000623466 AAMPQ13685 434 aa16.96■□□□□ 0.31
PCDHB17P-202ENST00000623466 RBM33Q96EV2 1170 aaKnown RBP16.96■□□□□ 0.31
PCDHB17P-202ENST00000623466 SMC4Q9NTJ3 1288 aa16.95■□□□□ 0.3
PCDHB17P-202ENST00000623466 SHPRHQ149N8 1683 aa16.95■□□□□ 0.3
PCDHB17P-202ENST00000623466 PMFBP1Q8TBY8 1022 aa16.95■□□□□ 0.3
PCDHB17P-202ENST00000623466 TBC1D2Q9BYX2 928 aa16.95■□□□□ 0.3
PCDHB17P-202ENST00000623466 FGD1P98174 961 aa16.95■□□□□ 0.3
PCDHB17P-202ENST00000623466 MYH16Q9H6N6 1097 aa16.95■□□□□ 0.3
PCDHB17P-202ENST00000623466 GZF1Q9H116 711 aaPredicted RBP16.94■□□□□ 0.3
PCDHB17P-202ENST00000623466 DCTN1Q14203 1278 aa16.94■□□□□ 0.3
PCDHB17P-202ENST00000623466 SSH1Q8WYL5 1049 aa16.94■□□□□ 0.3
PCDHB17P-202ENST00000623466 ANTXR1Q9H6X2 564 aa16.93■□□□□ 0.3
PCDHB17P-202ENST00000623466 UPF2Q9HAU5 1272 aaKnown RBP16.93■□□□□ 0.3
PCDHB17P-202ENST00000623466 PRR36Q9H6K5 1346 aa16.93■□□□□ 0.3
PCDHB17P-202ENST00000623466 PDE4CQ08493 712 aa16.93■□□□□ 0.3
PCDHB17P-202ENST00000623466 FAM83GA6ND36 823 aa16.93■□□□□ 0.3
PCDHB17P-202ENST00000623466 CCDC61Q9Y6R9 512 aa16.93■□□□□ 0.3
PCDHB17P-202ENST00000623466 NSD2O96028 1365 aa16.92■□□□□ 0.3
PCDHB17P-202ENST00000623466 NLRP1Q9C000 1473 aa16.92■□□□□ 0.3
PCDHB17P-202ENST00000623466 NGEFQ8N5V2 710 aa16.92■□□□□ 0.3
PCDHB17P-202ENST00000623466 PPIP5K1Q6PFW1 1433 aa16.92■□□□□ 0.3
PCDHB17P-202ENST00000623466 TNRQ92752 1358 aa16.92■□□□□ 0.3
PCDHB17P-202ENST00000623466 TBC1D32Q96NH3 1257 aa16.92■□□□□ 0.3
PCDHB17P-202ENST00000623466 FTSJ3Q8IY81 847 aaKnown RBP16.91■□□□□ 0.3
PCDHB17P-202ENST00000623466 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.91■□□□□ 0.3
PCDHB17P-202ENST00000623466 PNNQ9H307 717 aaKnown RBP16.9■□□□□ 0.3
PCDHB17P-202ENST00000623466 NOB1Q9ULX3 412 aaKnown RBP16.9■□□□□ 0.3
PCDHB17P-202ENST00000623466 ROBO2Q9HCK4 1378 aa16.9■□□□□ 0.3
PCDHB17P-202ENST00000623466 CCDC27Q2M243 656 aa16.9■□□□□ 0.3
PCDHB17P-202ENST00000623466 COG3Q96JB2 828 aa16.9■□□□□ 0.3
PCDHB17P-202ENST00000623466 SETD1AO15047 1707 aaKnown RBP16.89■□□□□ 0.29
PCDHB17P-202ENST00000623466 NUTM2GQ5VZR2 741 aa16.89■□□□□ 0.29
PCDHB17P-202ENST00000623466 IQSEC2Q5JU85 1478 aa16.89■□□□□ 0.29
PCDHB17P-202ENST00000623466 AEBP1Q8IUX7 1158 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms