RNA–Protein interactions for RNA: ENST00000622838.4

SEM1-222, Transcript of SEM1, 26S proteasome complex subunit, human

TSL 5

Gene SEM1, Length 885 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEM1-222	ENST00000622838	TEX2	Q8IWB9	1127 aa		6.63	□□□□□ -1.35
SEM1-222	ENST00000622838	TMA7	Q9Y2S6	64 aa	Known RBP	6.63	□□□□□ -1.35
SEM1-222	ENST00000622838	ZNF326	Q5BKZ1	582 aa	Known RBP	6.62	□□□□□ -1.35
SEM1-222	ENST00000622838	PHLDB3	Q6NSJ2	640 aa		6.62	□□□□□ -1.35
SEM1-222	ENST00000622838	NYAP1	Q6ZVC0	841 aa		6.62	□□□□□ -1.35
SEM1-222	ENST00000622838	GPATCH3	Q96I76	525 aa		6.62	□□□□□ -1.35
SEM1-222	ENST00000622838	UCN2	Q96RP3	112 aa		6.62	□□□□□ -1.35
SEM1-222	ENST00000622838	CDCA7	Q9BWT1	371 aa	Predicted RBP	6.62	□□□□□ -1.35
SEM1-222	ENST00000622838	FAM217B	Q9NTX9	383 aa	Predicted RBP	6.62	□□□□□ -1.35
SEM1-222	ENST00000622838	WBP1L	Q9NX94	342 aa		6.62	□□□□□ -1.35
SEM1-222	ENST00000622838	SOWAHB	A6NEL2	793 aa		6.61	□□□□□ -1.35
SEM1-222	ENST00000622838	SOWAHD	A6NJG2	315 aa		6.61	□□□□□ -1.35
SEM1-222	ENST00000622838	MARS	P56192	900 aa	Known RBP	6.61	□□□□□ -1.35
SEM1-222	ENST00000622838	PHOX2B	Q99453	314 aa		6.61	□□□□□ -1.35
SEM1-222	ENST00000622838	KLHL42	Q9P2K6	505 aa		6.61	□□□□□ -1.35
SEM1-222	ENST00000622838	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	6.61	□□□□□ -1.35
SEM1-222	ENST00000622838	ANKRD33B	A6NCL7	494 aa		6.6	□□□□□ -1.35
SEM1-222	ENST00000622838	ERCC5	P28715	1186 aa	Predicted RBP	6.6	□□□□□ -1.35
SEM1-222	ENST00000622838	LAPTM4B	Q86VI4	370 aa		6.6	□□□□□ -1.35
SEM1-222	ENST00000622838	LNPK	Q9C0E8	428 aa		6.6	□□□□□ -1.35
SEM1-222	ENST00000622838	LIMD1	Q9UGP4	676 aa		6.6	□□□□□ -1.35
SEM1-222	ENST00000622838	WASHC4	Q2M389	1173 aa		6.59	□□□□□ -1.35
SEM1-222	ENST00000622838	PROX2	Q3B8N5	592 aa		6.59	□□□□□ -1.35
SEM1-222	ENST00000622838	CCDC181	Q5TID7	509 aa		6.59	□□□□□ -1.35
SEM1-222	ENST00000622838	TYW1B	Q6NUM6	668 aa		6.59	□□□□□ -1.35
SEM1-222	ENST00000622838	DNAJC2	Q99543	621 aa	Known RBP	6.59	□□□□□ -1.35
SEM1-222	ENST00000622838	METTL14	Q9HCE5	456 aa	Known RBP	6.59	□□□□□ -1.35
SEM1-222	ENST00000622838	TFIP11	Q9UBB9	837 aa	Known RBP	6.59	□□□□□ -1.35
SEM1-222	ENST00000622838	SBNO2	Q9Y2G9	1366 aa		6.58	□□□□□ -1.36
SEM1-222	ENST00000622838		A0A0U1RQG5	324 aa	Predicted RBP	6.58	□□□□□ -1.36
SEM1-222	ENST00000622838	LCE2A	Q5TA79	106 aa	Predicted RBP	6.58	□□□□□ -1.36
SEM1-222	ENST00000622838	TMEM164	Q5U3C3	297 aa		6.58	□□□□□ -1.36
SEM1-222	ENST00000622838	LARGE2	Q8N3Y3	721 aa		6.58	□□□□□ -1.36
SEM1-222	ENST00000622838	PDZRN3	Q9UPQ7	1066 aa		6.58	□□□□□ -1.36
SEM1-222	ENST00000622838	PCDHGA10	Q9Y5H3	936 aa		6.58	□□□□□ -1.36
SEM1-222	ENST00000622838	MAFB	Q9Y5Q3	323 aa	Predicted RBP	6.58	□□□□□ -1.36
SEM1-222	ENST00000622838	NDUFB9	Q9Y6M9	179 aa		6.58	□□□□□ -1.36
SEM1-222	ENST00000622838	POTEC	B2RU33	542 aa		6.57	□□□□□ -1.36
SEM1-222	ENST00000622838	ARID4A	P29374	1257 aa	Predicted RBP	6.57	□□□□□ -1.36
SEM1-222	ENST00000622838	PRIM1	P49642	420 aa	Known RBP	6.57	□□□□□ -1.36
SEM1-222	ENST00000622838	TSNAXIP1	Q2TAA8	658 aa		6.57	□□□□□ -1.36
SEM1-222	ENST00000622838	HSP90AB4P	Q58FF6	505 aa		6.57	□□□□□ -1.36
SEM1-222	ENST00000622838	FBXO33	Q7Z6M2	555 aa		6.57	□□□□□ -1.36
SEM1-222	ENST00000622838	ZFR	Q96KR1	1074 aa	Known RBP	6.57	□□□□□ -1.36
SEM1-222	ENST00000622838	ALG2	Q9H553	416 aa		6.57	□□□□□ -1.36
SEM1-222	ENST00000622838	CUEDC1	Q9NWM3	386 aa	Predicted RBP	6.57	□□□□□ -1.36
SEM1-222	ENST00000622838	ZMIZ1	Q9ULJ6	1067 aa		6.57	□□□□□ -1.36
SEM1-222	ENST00000622838	TLDC2	A0PJX2	215 aa		6.56	□□□□□ -1.36
SEM1-222	ENST00000622838	GPR37L1	O60883	481 aa		6.56	□□□□□ -1.36
SEM1-222	ENST00000622838	PHF14	O94880	888 aa		6.56	□□□□□ -1.36
SEM1-222	ENST00000622838	COL9A1	P20849	921 aa		6.56	□□□□□ -1.36
SEM1-222	ENST00000622838	FGD1	P98174	961 aa		6.56	□□□□□ -1.36
SEM1-222	ENST00000622838	SET	Q01105	290 aa	Predicted RBP	6.56	□□□□□ -1.36
SEM1-222	ENST00000622838	TAGLN	Q01995	201 aa	Known RBP	6.56	□□□□□ -1.36
SEM1-222	ENST00000622838	EGFLAM	Q63HQ2	1017 aa		6.56	□□□□□ -1.36
SEM1-222	ENST00000622838	TREML4	Q6UXN2	200 aa		6.56	□□□□□ -1.36
SEM1-222	ENST00000622838	STK32A	Q8WU08	396 aa		6.56	□□□□□ -1.36
SEM1-222	ENST00000622838	TANGO6	Q9C0B7	1094 aa		6.56	□□□□□ -1.36
SEM1-222	ENST00000622838	BCL11A	Q9H165	835 aa		6.56	□□□□□ -1.36
SEM1-222	ENST00000622838	KIAA1468	Q9P260	1216 aa		6.56	□□□□□ -1.36
SEM1-222	ENST00000622838		V9GY48	417 aa	Predicted RBP	6.56	□□□□□ -1.36
SEM1-222	ENST00000622838	hCG_2014768	A0A024R1R8	64 aa		6.55	□□□□□ -1.36
SEM1-222	ENST00000622838	MAFG	O15525	162 aa		6.55	□□□□□ -1.36
SEM1-222	ENST00000622838	USP17L8	P0C7I0	530 aa		6.55	□□□□□ -1.36
SEM1-222	ENST00000622838	SERPINB4	P48594	390 aa		6.55	□□□□□ -1.36
SEM1-222	ENST00000622838	MCCD1	P59942	119 aa	Predicted RBP	6.55	□□□□□ -1.36
SEM1-222	ENST00000622838	PSME1	Q06323	249 aa		6.55	□□□□□ -1.36
SEM1-222	ENST00000622838	VAC14	Q08AM6	782 aa		6.55	□□□□□ -1.36
SEM1-222	ENST00000622838	ELOA	Q14241	798 aa	Known RBP	6.55	□□□□□ -1.36
SEM1-222	ENST00000622838	PTPRO	Q16827	1216 aa		6.55	□□□□□ -1.36
SEM1-222	ENST00000622838	SDE2	Q6IQ49	451 aa		6.55	□□□□□ -1.36
SEM1-222	ENST00000622838	MORC4	Q8TE76	937 aa		6.55	□□□□□ -1.36
SEM1-222	ENST00000622838	VTI1A	Q96AJ9	217 aa		6.55	□□□□□ -1.36
SEM1-222	ENST00000622838	GJD4	Q96KN9	370 aa	Predicted RBP	6.55	□□□□□ -1.36
SEM1-222	ENST00000622838	ANAPC15	P60006	121 aa		6.54	□□□□□ -1.36
SEM1-222	ENST00000622838	IGBP1	P78318	339 aa		6.54	□□□□□ -1.36
SEM1-222	ENST00000622838	DIXDC1	Q155Q3	683 aa		6.54	□□□□□ -1.36
SEM1-222	ENST00000622838	PIK3R5	Q8WYR1	880 aa		6.54	□□□□□ -1.36
SEM1-222	ENST00000622838	KCNB2	Q92953	911 aa		6.54	□□□□□ -1.36
SEM1-222	ENST00000622838	LRCH3	Q96II8	777 aa		6.54	□□□□□ -1.36
SEM1-222	ENST00000622838	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	6.54	□□□□□ -1.36
SEM1-222	ENST00000622838	BIN2	Q9UBW5	565 aa	Predicted RBP	6.54	□□□□□ -1.36
SEM1-222	ENST00000622838	SEPT9	Q9UHD8	586 aa	Predicted RBP	6.54	□□□□□ -1.36
SEM1-222	ENST00000622838	TBX22	Q9Y458	520 aa		6.54	□□□□□ -1.36
SEM1-222	ENST00000622838	PEX14	O75381	377 aa		6.53	□□□□□ -1.36
SEM1-222	ENST00000622838	AP1G2	O75843	785 aa		6.53	□□□□□ -1.36
SEM1-222	ENST00000622838	PARN	O95453	639 aa	Known RBP	6.53	□□□□□ -1.36
SEM1-222	ENST00000622838	MAP4K4	O95819	1239 aa	Predicted RBP	6.53	□□□□□ -1.36
SEM1-222	ENST00000622838	SSFA2	P28290	1259 aa		6.53	□□□□□ -1.36
SEM1-222	ENST00000622838	HDLBP	Q00341	1268 aa	Known RBP	6.53	□□□□□ -1.36
SEM1-222	ENST00000622838	FAM98C	Q17RN3	349 aa	Known RBP	6.53	□□□□□ -1.36
SEM1-222	ENST00000622838	SPTY2D1	Q68D10	685 aa	Predicted RBP	6.53	□□□□□ -1.36
SEM1-222	ENST00000622838	EPAS1	Q99814	870 aa		6.53	□□□□□ -1.36
SEM1-222	ENST00000622838	TSR3	Q9UJK0	312 aa	Known RBP	6.53	□□□□□ -1.36
SEM1-222	ENST00000622838	CENPB	P07199	599 aa	Predicted RBP	6.52	□□□□□ -1.37
SEM1-222	ENST00000622838	RAD51AP2	Q09MP3	1159 aa		6.52	□□□□□ -1.37
SEM1-222	ENST00000622838	TUSC1	Q2TAM9	212 aa		6.52	□□□□□ -1.37
SEM1-222	ENST00000622838	CCDC144B	Q3MJ40	725 aa		6.52	□□□□□ -1.37
SEM1-222	ENST00000622838	PPP1R18	Q6NYC8	613 aa		6.52	□□□□□ -1.37
SEM1-222	ENST00000622838	RIC3	Q7Z5B4	369 aa		6.52	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms