RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 LSM11P83369 360 aaKnown RBP eCLIP7.79□□□□□ -1.16
RPRD1B-209ENST00000622494 CHIC2Q9UKJ5 165 aa7.79□□□□□ -1.16
RPRD1B-209ENST00000622494 ZMYM3Q14202 1370 aa7.79□□□□□ -1.16
RPRD1B-209ENST00000622494 DHX29Q7Z478 1369 aaKnown RBP7.79□□□□□ -1.16
RPRD1B-209ENST00000622494 MAST1Q9Y2H9 1570 aa7.79□□□□□ -1.16
RPRD1B-209ENST00000622494 UHRF1BP1Q6BDS2 1440 aa7.78□□□□□ -1.16
RPRD1B-209ENST00000622494 FGD6Q6ZV73 1430 aa7.78□□□□□ -1.16
RPRD1B-209ENST00000622494 DNMT1P26358 1616 aaKnown RBP7.78□□□□□ -1.16
RPRD1B-209ENST00000622494 CAMSAP1Q5T5Y3 1602 aa7.78□□□□□ -1.16
RPRD1B-209ENST00000622494 RNF17Q9BXT8 1623 aaKnown RBP7.78□□□□□ -1.16
RPRD1B-209ENST00000622494 BARGINQ6ZT62 677 aa7.78□□□□□ -1.16
RPRD1B-209ENST00000622494 CDCA7LQ96GN5 454 aa7.78□□□□□ -1.16
RPRD1B-209ENST00000622494 PCDH10Q9P2E7 1040 aa7.78□□□□□ -1.16
RPRD1B-209ENST00000622494 FAM198AQ9UFP1 575 aa7.78□□□□□ -1.16
RPRD1B-209ENST00000622494 TSKSQ9UJT2 592 aa7.78□□□□□ -1.16
RPRD1B-209ENST00000622494 VPS9D1Q9Y2B5 631 aa7.78□□□□□ -1.16
RPRD1B-209ENST00000622494 ABCC3O15438 1527 aa7.78□□□□□ -1.16
RPRD1B-209ENST00000622494 RTEL1-TNFRSF6BF6WH68 1400 aa7.78□□□□□ -1.16
RPRD1B-209ENST00000622494 ZNF142P52746 1687 aaPredicted RBP7.77□□□□□ -1.17
RPRD1B-209ENST00000622494 CEP170BQ9Y4F5 1589 aaPredicted RBP7.77□□□□□ -1.17
RPRD1B-209ENST00000622494 TRIM6-TRIM34B2RNG4 842 aa7.77□□□□□ -1.17
RPRD1B-209ENST00000622494 FECHP22830 423 aa7.77□□□□□ -1.17
RPRD1B-209ENST00000622494 PROX2Q3B8N5 592 aa7.77□□□□□ -1.17
RPRD1B-209ENST00000622494 DAPK1P53355 1430 aa7.77□□□□□ -1.17
RPRD1B-209ENST00000622494 PADI6Q6TGC4 694 aa7.76□□□□□ -1.17
RPRD1B-209ENST00000622494 ESF1Q9H501 851 aaKnown RBP7.76□□□□□ -1.17
RPRD1B-209ENST00000622494 RRP7BPQ9NSQ0 103 aa7.76□□□□□ -1.17
RPRD1B-209ENST00000622494 SETD1BQ9UPS6 1966 aaKnown RBP7.76□□□□□ -1.17
RPRD1B-209ENST00000622494 KDM5DQ9BY66 1539 aa7.76□□□□□ -1.17
RPRD1B-209ENST00000622494 NCOA1Q15788 1441 aa7.76□□□□□ -1.17
RPRD1B-209ENST00000622494 TCOF1Q13428 1488 aaKnown RBP7.75□□□□□ -1.17
RPRD1B-209ENST00000622494 BHMG1C9JSJ3 638 aaPredicted RBP7.75□□□□□ -1.17
RPRD1B-209ENST00000622494 HRO43593 1189 aa7.75□□□□□ -1.17
RPRD1B-209ENST00000622494 ADGRD1Q6QNK2 874 aa7.75□□□□□ -1.17
RPRD1B-209ENST00000622494 CNTLNQ9NXG0 1405 aa7.75□□□□□ -1.17
RPRD1B-209ENST00000622494 NEURL4Q96JN8 1562 aa7.75□□□□□ -1.17
RPRD1B-209ENST00000622494 KIF15Q9NS87 1388 aa7.74□□□□□ -1.17
RPRD1B-209ENST00000622494 MAP2K5Q13163 448 aa7.74□□□□□ -1.17
RPRD1B-209ENST00000622494 FAM50AQ14320 339 aaKnown RBP7.74□□□□□ -1.17
RPRD1B-209ENST00000622494 RABGEF1Q9UJ41 708 aa7.74□□□□□ -1.17
RPRD1B-209ENST00000622494 MIA2Q96PC5 1412 aa7.74□□□□□ -1.17
RPRD1B-209ENST00000622494 TPRNQ4KMQ1 711 aa7.73□□□□□ -1.17
RPRD1B-209ENST00000622494 LTBP4Q8N2S1 1624 aa7.73□□□□□ -1.17
RPRD1B-209ENST00000622494 EIF2AK4Q9P2K8 1649 aaKnown RBP7.73□□□□□ -1.17
RPRD1B-209ENST00000622494 PZPP20742 1482 aa7.73□□□□□ -1.17
RPRD1B-209ENST00000622494 MINK1Q8N4C8 1332 aaPredicted RBP7.73□□□□□ -1.17
RPRD1B-209ENST00000622494 TNRQ92752 1358 aa7.72□□□□□ -1.17
RPRD1B-209ENST00000622494 POLR1AO95602 1720 aaPredicted RBP7.72□□□□□ -1.17
RPRD1B-209ENST00000622494 STRCP1A6NGW2 1772 aa7.72□□□□□ -1.17
RPRD1B-209ENST00000622494 NPATQ14207 1427 aa7.72□□□□□ -1.17
RPRD1B-209ENST00000622494 DEPDC5O75140 1603 aa7.72□□□□□ -1.17
RPRD1B-209ENST00000622494 C3orf80F5H4A9 247 aa7.72□□□□□ -1.17
RPRD1B-209ENST00000622494 TSPY4P0CV99 314 aa7.72□□□□□ -1.17
RPRD1B-209ENST00000622494 TSPY10P0CW01 314 aa7.72□□□□□ -1.17
RPRD1B-209ENST00000622494 ITGAEP38570 1179 aa7.72□□□□□ -1.17
RPRD1B-209ENST00000622494 KIAA1468Q9P260 1216 aa7.72□□□□□ -1.17
RPRD1B-209ENST00000622494 ADGRG1Q9Y653 693 aa7.72□□□□□ -1.17
RPRD1B-209ENST00000622494 SHANK2Q9UPX8 1470 aa7.72□□□□□ -1.17
RPRD1B-209ENST00000622494 ZNF335Q9H4Z2 1342 aaPredicted RBP7.72□□□□□ -1.17
RPRD1B-209ENST00000622494 WASHC2CQ9Y4E1 1318 aa7.72□□□□□ -1.17
RPRD1B-209ENST00000622494 DUOX2Q9NRD8 1548 aa7.72□□□□□ -1.17
RPRD1B-209ENST00000622494 MYO5BQ9ULV0 1848 aa7.71□□□□□ -1.17
RPRD1B-209ENST00000622494 A2ML1A8K2U0 1454 aa7.71□□□□□ -1.18
RPRD1B-209ENST00000622494 ERVK-7P63135 1459 aa7.71□□□□□ -1.18
RPRD1B-209ENST00000622494 IRF6O14896 467 aa7.71□□□□□ -1.18
RPRD1B-209ENST00000622494 ANKRD13DQ6ZTN6 518 aa7.71□□□□□ -1.18
RPRD1B-209ENST00000622494 PACS2Q86VP3 889 aa7.71□□□□□ -1.18
RPRD1B-209ENST00000622494 PRDM15P57071 1507 aaPredicted RBP7.71□□□□□ -1.18
RPRD1B-209ENST00000622494 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.71□□□□□ -1.18
RPRD1B-209ENST00000622494 ZC3H13Q5T200 1668 aaKnown RBP7.7□□□□□ -1.18
RPRD1B-209ENST00000622494 UBR1Q8IWV7 1749 aa7.7□□□□□ -1.18
RPRD1B-209ENST00000622494 TATDN2Q93075 761 aa7.7□□□□□ -1.18
RPRD1B-209ENST00000622494 EYA1Q99502 592 aa7.7□□□□□ -1.18
RPRD1B-209ENST00000622494 SYNMO15061 1565 aa7.7□□□□□ -1.18
RPRD1B-209ENST00000622494 SPATA31D1Q6ZQQ2 1576 aa7.7□□□□□ -1.18
RPRD1B-209ENST00000622494 UGGT1Q9NYU2 1555 aa7.7□□□□□ -1.18
RPRD1B-209ENST00000622494 PIK3C2BO00750 1634 aa7.7□□□□□ -1.18
RPRD1B-209ENST00000622494 NBPF26B4DH59 902 aa7.69□□□□□ -1.18
RPRD1B-209ENST00000622494 LAPTM4BQ86VI4 370 aa7.69□□□□□ -1.18
RPRD1B-209ENST00000622494 CCDC102AQ96A19 550 aa7.69□□□□□ -1.18
RPRD1B-209ENST00000622494 VWDEQ8N2E2 1590 aa7.68□□□□□ -1.18
RPRD1B-209ENST00000622494 NUDT18Q6ZVK8 323 aa7.68□□□□□ -1.18
RPRD1B-209ENST00000622494 PXYLP1Q8TE99 480 aa7.68□□□□□ -1.18
RPRD1B-209ENST00000622494 FBXO41Q8TF61 875 aa7.68□□□□□ -1.18
RPRD1B-209ENST00000622494 NBPF3Q9H094 633 aa7.68□□□□□ -1.18
RPRD1B-209ENST00000622494 PTPRTO14522 1441 aa7.68□□□□□ -1.18
RPRD1B-209ENST00000622494 ADGRL2O95490 1459 aa7.68□□□□□ -1.18
RPRD1B-209ENST00000622494 OATP04181 439 aa7.67□□□□□ -1.18
RPRD1B-209ENST00000622494 PRKCSHP14314 528 aaPredicted RBP7.67□□□□□ -1.18
RPRD1B-209ENST00000622494 FAM161AQ3B820 660 aa7.67□□□□□ -1.18
RPRD1B-209ENST00000622494 METTL3Q86U44 580 aaKnown RBP7.67□□□□□ -1.18
RPRD1B-209ENST00000622494 SLC24A3Q9HC58 644 aa7.67□□□□□ -1.18
RPRD1B-209ENST00000622494 PNMA3Q9UL41 463 aa7.67□□□□□ -1.18
RPRD1B-209ENST00000622494 ERBINQ96RT1 1412 aa7.67□□□□□ -1.18
RPRD1B-209ENST00000622494 RSPH4AQ5TD94 716 aa7.66□□□□□ -1.18
RPRD1B-209ENST00000622494 KRI1Q8N9T8 703 aaKnown RBP7.66□□□□□ -1.18
RPRD1B-209ENST00000622494 RBM46Q8TBY0 533 aaKnown RBP7.66□□□□□ -1.18
RPRD1B-209ENST00000622494 AK7Q96M32 723 aa7.66□□□□□ -1.18
RPRD1B-209ENST00000622494 PHOX2BQ99453 314 aa7.66□□□□□ -1.18
RPRD1B-209ENST00000622494 EFCAB6Q5THR3 1501 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms