RNA–Protein interactions for RNA: ENST00000622457.1

LTBP4-238, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-238ENST00000622457 ESCO1Q5FWF5 840 aa16.9■□□□□ 0.3
LTBP4-238ENST00000622457 ONECUT3O60422 494 aaPredicted RBP16.89■□□□□ 0.29
LTBP4-238ENST00000622457 NRAPQ86VF7 1730 aa16.89■□□□□ 0.29
LTBP4-238ENST00000622457 TRPM3Q9HCF6 1732 aaPredicted RBP16.89■□□□□ 0.29
LTBP4-238ENST00000622457 NWD2Q9ULI1 1742 aa16.89■□□□□ 0.29
LTBP4-238ENST00000622457 WASLO00401 505 aaPredicted RBP16.88■□□□□ 0.29
LTBP4-238ENST00000622457 EZH2Q15910 746 aaKnown RBP16.88■□□□□ 0.29
LTBP4-238ENST00000622457 MINK1Q8N4C8 1332 aaPredicted RBP16.88■□□□□ 0.29
LTBP4-238ENST00000622457 PLEKHG5O94827 1062 aa16.87■□□□□ 0.29
LTBP4-238ENST00000622457 CABLES1Q8TDN4 633 aa16.87■□□□□ 0.29
LTBP4-238ENST00000622457 CENPJQ9HC77 1338 aaPredicted RBP16.87■□□□□ 0.29
LTBP4-238ENST00000622457 VPS72Q15906 364 aa16.86■□□□□ 0.29
LTBP4-238ENST00000622457 HIRIP3Q9BW71 556 aaPredicted RBP16.86■□□□□ 0.29
LTBP4-238ENST00000622457 NUP188Q5SRE5 1749 aa16.86■□□□□ 0.29
LTBP4-238ENST00000622457 ALS2Q96Q42 1657 aa16.85■□□□□ 0.29
LTBP4-238ENST00000622457 NUTM2FA1L443 756 aa16.85■□□□□ 0.29
LTBP4-238ENST00000622457 NBPF8Q3BBV2 869 aa16.85■□□□□ 0.29
LTBP4-238ENST00000622457 PHF8Q9UPP1 1060 aa16.85■□□□□ 0.29
LTBP4-238ENST00000622457 PRR36Q9H6K5 1346 aa16.84■□□□□ 0.29
LTBP4-238ENST00000622457 SBNO2Q9Y2G9 1366 aa16.84■□□□□ 0.29
LTBP4-238ENST00000622457 RREB1Q92766 1687 aa16.84■□□□□ 0.29
LTBP4-238ENST00000622457 TNS3Q68CZ2 1445 aa16.83■□□□□ 0.28
LTBP4-238ENST00000622457 SBNO1A3KN83 1393 aa16.82■□□□□ 0.28
LTBP4-238ENST00000622457 TIMELESSQ9UNS1 1208 aa16.82■□□□□ 0.28
LTBP4-238ENST00000622457 CCDC9Q9Y3X0 531 aaKnown RBP16.82■□□□□ 0.28
LTBP4-238ENST00000622457 SPATA31A3Q5VYP0 1347 aa16.81■□□□□ 0.28
LTBP4-238ENST00000622457 SENP3-EIF4A1A0A087X0R7 540 aa16.81■□□□□ 0.28
LTBP4-238ENST00000622457 FAM98CQ17RN3 349 aaKnown RBP16.81■□□□□ 0.28
LTBP4-238ENST00000622457 CRYBG1Q9Y4K1 1723 aa16.81■□□□□ 0.28
LTBP4-238ENST00000622457 DISP2A7MBM2 1401 aa16.8■□□□□ 0.28
LTBP4-238ENST00000622457 CAMKK2Q96RR4 588 aa16.8■□□□□ 0.28
LTBP4-238ENST00000622457 ZNF784Q8NCA9 323 aaPredicted RBP16.79■□□□□ 0.28
LTBP4-238ENST00000622457 THSD7AQ9UPZ6 1657 aa16.78■□□□□ 0.28
LTBP4-238ENST00000622457 POLR3AO14802 1390 aaPredicted RBP16.78■□□□□ 0.28
LTBP4-238ENST00000622457 A0A0G2JS52 829 aa16.78■□□□□ 0.28
LTBP4-238ENST00000622457 MYT1Q01538 1121 aa16.78■□□□□ 0.28
LTBP4-238ENST00000622457 NUDT16Q96DE0 195 aaKnown RBP16.78■□□□□ 0.28
LTBP4-238ENST00000622457 CDK19Q9BWU1 502 aa16.78■□□□□ 0.28
LTBP4-238ENST00000622457 ARHGEF10O15013 1369 aa16.77■□□□□ 0.28
LTBP4-238ENST00000622457 AKAP12Q02952 1782 aa16.77■□□□□ 0.28
LTBP4-238ENST00000622457 FAM83GA6ND36 823 aa16.77■□□□□ 0.28
LTBP4-238ENST00000622457 PSME1Q06323 249 aa16.77■□□□□ 0.28
LTBP4-238ENST00000622457 KRT28Q7Z3Y7 464 aa16.77■□□□□ 0.28
LTBP4-238ENST00000622457 CARD11Q9BXL7 1154 aa16.77■□□□□ 0.28
LTBP4-238ENST00000622457 CCDC61Q9Y6R9 512 aa16.76■□□□□ 0.27
LTBP4-238ENST00000622457 EVC2Q86UK5 1308 aa16.75■□□□□ 0.27
LTBP4-238ENST00000622457 PMFBP1Q8TBY8 1022 aa16.75■□□□□ 0.27
LTBP4-238ENST00000622457 PPIP5K1Q6PFW1 1433 aa16.74■□□□□ 0.27
LTBP4-238ENST00000622457 PLEKHG3A1L390 1219 aa16.74■□□□□ 0.27
LTBP4-238ENST00000622457 PHRF1Q9P1Y6 1649 aaKnown RBP16.74■□□□□ 0.27
LTBP4-238ENST00000622457 CHD4Q14839 1912 aa16.73■□□□□ 0.27
LTBP4-238ENST00000622457 UTRNP46939 3433 aa16.73■□□□□ 0.27
LTBP4-238ENST00000622457 TRIM37O94972 964 aa16.72■□□□□ 0.27
LTBP4-238ENST00000622457 SRPK2P78362 688 aaKnown RBP16.72■□□□□ 0.27
LTBP4-238ENST00000622457 NGDNQ8NEJ9 315 aaKnown RBP16.72■□□□□ 0.27
LTBP4-238ENST00000622457 MON2Q7Z3U7 1717 aa16.72■□□□□ 0.27
LTBP4-238ENST00000622457 BRD4O60885 1362 aaPredicted RBP16.72■□□□□ 0.27
LTBP4-238ENST00000622457 NRKQ7Z2Y5 1582 aa16.72■□□□□ 0.27
LTBP4-238ENST00000622457 CCER1Q8TC90 406 aaPredicted RBP16.71■□□□□ 0.27
LTBP4-238ENST00000622457 MYOM1P52179 1685 aa16.7■□□□□ 0.26
LTBP4-238ENST00000622457 ACEP12821 1306 aa16.7■□□□□ 0.26
LTBP4-238ENST00000622457 C1QTNF8P60827 252 aa16.69■□□□□ 0.26
LTBP4-238ENST00000622457 CABP2Q9NPB3 220 aa16.69■□□□□ 0.26
LTBP4-238ENST00000622457 CASZ1Q86V15 1759 aa16.69■□□□□ 0.26
LTBP4-238ENST00000622457 USP47Q96K76 1375 aa16.67■□□□□ 0.26
LTBP4-238ENST00000622457 COL14A1Q05707 1796 aaKnown RBP16.67■□□□□ 0.26
LTBP4-238ENST00000622457 USP54Q70EL1 1684 aa16.67■□□□□ 0.26
LTBP4-238ENST00000622457 SLC24A1O60721 1099 aa16.67■□□□□ 0.26
LTBP4-238ENST00000622457 HAP1P54257 671 aaPredicted RBP16.67■□□□□ 0.26
LTBP4-238ENST00000622457 PDGFDQ9GZP0 370 aaPredicted RBP16.67■□□□□ 0.26
LTBP4-238ENST00000622457 BTG4Q9NY30 223 aa16.67■□□□□ 0.26
LTBP4-238ENST00000622457 USP6P35125 1406 aa16.67■□□□□ 0.26
LTBP4-238ENST00000622457 NINLQ9Y2I6 1382 aa16.66■□□□□ 0.26
LTBP4-238ENST00000622457 PIK3C2AO00443 1686 aa16.66■□□□□ 0.26
LTBP4-238ENST00000622457 KCNQ2O43526 872 aa16.66■□□□□ 0.26
LTBP4-238ENST00000622457 APBA3O96018 575 aa16.66■□□□□ 0.26
LTBP4-238ENST00000622457 PUS7Q96PZ0 661 aaKnown RBP16.66■□□□□ 0.26
LTBP4-238ENST00000622457 PPP1R1BQ9UD71 204 aaPredicted RBP16.66■□□□□ 0.26
LTBP4-238ENST00000622457 SSH2Q76I76 1423 aa16.65■□□□□ 0.26
LTBP4-238ENST00000622457 SPATA31A5Q5VU36 1347 aa16.65■□□□□ 0.26
LTBP4-238ENST00000622457 SPATA31A7Q8IWB4 1347 aa16.65■□□□□ 0.26
LTBP4-238ENST00000622457 CPSF1Q10570 1443 aaKnown RBP16.64■□□□□ 0.25
LTBP4-238ENST00000622457 TESK2Q96S53 571 aa16.64■□□□□ 0.25
LTBP4-238ENST00000622457 SPON1Q9HCB6 807 aa16.64■□□□□ 0.25
LTBP4-238ENST00000622457 LMOD2Q6P5Q4 547 aa16.63■□□□□ 0.25
LTBP4-238ENST00000622457 ST20-MTHFSA0A0A6YYL1 179 aa16.62■□□□□ 0.25
LTBP4-238ENST00000622457 CABP1Q9NZU7 370 aa16.62■□□□□ 0.25
LTBP4-238ENST00000622457 CEP350Q5VT06 3117 aa16.62■□□□□ 0.25
LTBP4-238ENST00000622457 CD163L1Q9NR16 1453 aa16.61■□□□□ 0.25
LTBP4-238ENST00000622457 SLIT3O75094 1523 aa16.61■□□□□ 0.25
LTBP4-238ENST00000622457 PAK3O75914 559 aaPredicted RBP16.61■□□□□ 0.25
LTBP4-238ENST00000622457 ZNF692Q9BU19 519 aaPredicted RBP16.6■□□□□ 0.25
LTBP4-238ENST00000622457 USP19O94966 1318 aa16.6■□□□□ 0.25
LTBP4-238ENST00000622457 ANO8Q9HCE9 1232 aaPredicted RBP16.59■□□□□ 0.25
LTBP4-238ENST00000622457 LMO7Q8WWI1 1683 aa16.59■□□□□ 0.25
LTBP4-238ENST00000622457 SBF2Q86WG5 1849 aa16.57■□□□□ 0.24
LTBP4-238ENST00000622457 PARD3Q8TEW0 1356 aa16.57■□□□□ 0.24
LTBP4-238ENST00000622457 TTC21AQ8NDW8 1320 aa16.57■□□□□ 0.24
LTBP4-238ENST00000622457 CPDO75976 1380 aa16.56■□□□□ 0.24
LTBP4-238ENST00000622457 KTN1Q86UP2 1357 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms