RNA–Protein interactions for RNA: ENST00000622107.4

LTBP4-237, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-237ENST00000622107 CCER1Q8TC90 406 aaPredicted RBP21.22■□□□□ 0.99
LTBP4-237ENST00000622107 POLR3AO14802 1390 aaPredicted RBP21.22■□□□□ 0.99
LTBP4-237ENST00000622107 UPF1Q92900 1129 aaKnown RBP eCLIP21.2■□□□□ 0.98
LTBP4-237ENST00000622107 PLCH1Q4KWH8 1693 aa21.2■□□□□ 0.98
LTBP4-237ENST00000622107 PLEKHG3A1L390 1219 aa21.19■□□□□ 0.98
LTBP4-237ENST00000622107 GJD4Q96KN9 370 aaPredicted RBP21.19■□□□□ 0.98
LTBP4-237ENST00000622107 ACEP12821 1306 aa21.19■□□□□ 0.98
LTBP4-237ENST00000622107 PPIP5K1Q6PFW1 1433 aa21.19■□□□□ 0.98
LTBP4-237ENST00000622107 NWD2Q9ULI1 1742 aa21.18■□□□□ 0.98
LTBP4-237ENST00000622107 RALGAPBQ86X10 1494 aa21.18■□□□□ 0.98
LTBP4-237ENST00000622107 CABP2Q9NPB3 220 aa21.17■□□□□ 0.98
LTBP4-237ENST00000622107 ATAD2Q6PL18 1390 aa21.16■□□□□ 0.98
LTBP4-237ENST00000622107 NBPF8Q3BBV2 869 aa21.16■□□□□ 0.98
LTBP4-237ENST00000622107 CRYBG1Q9Y4K1 1723 aa21.15■□□□□ 0.98
LTBP4-237ENST00000622107 GLI3P10071 1580 aa21.15■□□□□ 0.98
LTBP4-237ENST00000622107 EVC2Q86UK5 1308 aa21.15■□□□□ 0.98
LTBP4-237ENST00000622107 CARD11Q9BXL7 1154 aa21.15■□□□□ 0.98
LTBP4-237ENST00000622107 TIMELESSQ9UNS1 1208 aa21.15■□□□□ 0.98
LTBP4-237ENST00000622107 FAM83GA6ND36 823 aa21.14■□□□□ 0.97
LTBP4-237ENST00000622107 VPS72Q15906 364 aa21.14■□□□□ 0.97
LTBP4-237ENST00000622107 COL14A1Q05707 1796 aaKnown RBP21.13■□□□□ 0.97
LTBP4-237ENST00000622107 PHRF1Q9P1Y6 1649 aaKnown RBP21.11■□□□□ 0.97
LTBP4-237ENST00000622107 EP400Q96L91 3159 aa21.11■□□□□ 0.97
LTBP4-237ENST00000622107 BRD4O60885 1362 aaPredicted RBP21.1■□□□□ 0.97
LTBP4-237ENST00000622107 NRAPQ86VF7 1730 aa21.1■□□□□ 0.97
LTBP4-237ENST00000622107 PRDM11Q9NQV5 511 aa21.1■□□□□ 0.97
LTBP4-237ENST00000622107 CCDC9Q9Y3X0 531 aaKnown RBP21.1■□□□□ 0.97
LTBP4-237ENST00000622107 SBNO2Q9Y2G9 1366 aa21.1■□□□□ 0.97
LTBP4-237ENST00000622107 NUTM2GQ5VZR2 741 aa21.09■□□□□ 0.97
LTBP4-237ENST00000622107 BTG4Q9NY30 223 aa21.09■□□□□ 0.97
LTBP4-237ENST00000622107 CABP1Q9NZU7 370 aa21.09■□□□□ 0.97
LTBP4-237ENST00000622107 USP6P35125 1406 aa21.08■□□□□ 0.97
LTBP4-237ENST00000622107 KIAA0232Q92628 1395 aa21.08■□□□□ 0.96
LTBP4-237ENST00000622107 NRKQ7Z2Y5 1582 aa21.07■□□□□ 0.96
LTBP4-237ENST00000622107 ABTB2Q8N961 1025 aa21.07■□□□□ 0.96
LTBP4-237ENST00000622107 USP19O94966 1318 aa21.05■□□□□ 0.96
LTBP4-237ENST00000622107 NLRP13Q86W25 1043 aa21.03■□□□□ 0.96
LTBP4-237ENST00000622107 SEPT12Q8IYM1 358 aa21.03■□□□□ 0.96
LTBP4-237ENST00000622107 ZC3H6P61129 1189 aaKnown RBP21.02■□□□□ 0.96
LTBP4-237ENST00000622107 CHRNA2Q15822 529 aa21.02■□□□□ 0.96
LTBP4-237ENST00000622107 CPDO75976 1380 aa21.01■□□□□ 0.95
LTBP4-237ENST00000622107 SLC24A1O60721 1099 aa21.01■□□□□ 0.95
LTBP4-237ENST00000622107 SSH2Q76I76 1423 aa21.01■□□□□ 0.95
LTBP4-237ENST00000622107 A0A0G2JS52 829 aa21■□□□□ 0.95
LTBP4-237ENST00000622107 ONECUT3O60422 494 aaPredicted RBP21■□□□□ 0.95
LTBP4-237ENST00000622107 MYT1Q01538 1121 aa21■□□□□ 0.95
LTBP4-237ENST00000622107 SPATA31A5Q5VU36 1347 aa21■□□□□ 0.95
LTBP4-237ENST00000622107 SPATA31A7Q8IWB4 1347 aa21■□□□□ 0.95
LTBP4-237ENST00000622107 FAM98CQ17RN3 349 aaKnown RBP20.98■□□□□ 0.95
LTBP4-237ENST00000622107 ZNF692Q9BU19 519 aaPredicted RBP20.98■□□□□ 0.95
LTBP4-237ENST00000622107 PIK3C2AO00443 1686 aa20.98■□□□□ 0.95
LTBP4-237ENST00000622107 GCP02774 474 aa20.97■□□□□ 0.95
LTBP4-237ENST00000622107 NLRP6P59044 892 aa20.97■□□□□ 0.95
LTBP4-237ENST00000622107 STRN4Q9NRL3 753 aa20.97■□□□□ 0.95
LTBP4-237ENST00000622107 SLIT3O75094 1523 aa20.97■□□□□ 0.95
LTBP4-237ENST00000622107 BRWD3Q6RI45 1802 aa20.97■□□□□ 0.95
LTBP4-237ENST00000622107 CPSF1Q10570 1443 aaKnown RBP20.96■□□□□ 0.95
LTBP4-237ENST00000622107 AKAP12Q02952 1782 aa20.96■□□□□ 0.95
LTBP4-237ENST00000622107 CCDC125Q86Z20 511 aa20.96■□□□□ 0.95
LTBP4-237ENST00000622107 KTN1Q86UP2 1357 aaKnown RBP20.96■□□□□ 0.95
LTBP4-237ENST00000622107 LMO7Q8WWI1 1683 aa20.96■□□□□ 0.95
LTBP4-237ENST00000622107 KRT27Q7Z3Y8 459 aa20.95■□□□□ 0.94
LTBP4-237ENST00000622107 TTC21BQ7Z4L5 1316 aa20.95■□□□□ 0.94
LTBP4-237ENST00000622107 SPATA31A1Q5TZJ5 1347 aa20.94■□□□□ 0.94
LTBP4-237ENST00000622107 TTC21AQ8NDW8 1320 aa20.94■□□□□ 0.94
LTBP4-237ENST00000622107 BLMP54132 1417 aaPredicted RBP20.94■□□□□ 0.94
LTBP4-237ENST00000622107 THSD7AQ9UPZ6 1657 aa20.93■□□□□ 0.94
LTBP4-237ENST00000622107 CAMTA1Q9Y6Y1 1673 aa20.93■□□□□ 0.94
LTBP4-237ENST00000622107 EVA1CP58658 441 aa20.92■□□□□ 0.94
LTBP4-237ENST00000622107 MON2Q7Z3U7 1717 aa20.92■□□□□ 0.94
LTBP4-237ENST00000622107 TMC1Q8TDI8 760 aa20.91■□□□□ 0.94
LTBP4-237ENST00000622107 USP47Q96K76 1375 aa20.91■□□□□ 0.94
LTBP4-237ENST00000622107 COL5A2P05997 1499 aaPredicted RBP20.9■□□□□ 0.94
LTBP4-237ENST00000622107 CD163L1Q9NR16 1453 aa20.9■□□□□ 0.94
LTBP4-237ENST00000622107 ST20-MTHFSA0A0A6YYL1 179 aa20.9■□□□□ 0.94
LTBP4-237ENST00000622107 AATKQ6ZMQ8 1374 aa20.89■□□□□ 0.93
LTBP4-237ENST00000622107 ZBTB7CA1YPR0 619 aa20.89■□□□□ 0.93
LTBP4-237ENST00000622107 PUS7Q96PZ0 661 aaKnown RBP20.89■□□□□ 0.93
LTBP4-237ENST00000622107 TESK2Q96S53 571 aa20.89■□□□□ 0.93
LTBP4-237ENST00000622107 LARP1Q6PKG0 1096 aaKnown RBP20.88■□□□□ 0.93
LTBP4-237ENST00000622107 HDGFL2Q7Z4V5 671 aaPredicted RBP20.88■□□□□ 0.93
LTBP4-237ENST00000622107 KCNH5Q8NCM2 988 aa20.88■□□□□ 0.93
LTBP4-237ENST00000622107 NINLQ9Y2I6 1382 aa20.87■□□□□ 0.93
LTBP4-237ENST00000622107 SF3B2Q13435 895 aaKnown RBP20.87■□□□□ 0.93
LTBP4-237ENST00000622107 USP35Q9P2H5 1018 aa20.87■□□□□ 0.93
LTBP4-237ENST00000622107 TMF1P82094 1093 aa20.86■□□□□ 0.93
LTBP4-237ENST00000622107 CDCA8Q53HL2 280 aa20.86■□□□□ 0.93
LTBP4-237ENST00000622107 SLC12A5Q9H2X9 1139 aa20.86■□□□□ 0.93
LTBP4-237ENST00000622107 TERF2IPQ9NYB0 399 aa20.86■□□□□ 0.93
LTBP4-237ENST00000622107 EDC4Q6P2E9 1401 aaKnown RBP20.86■□□□□ 0.93
LTBP4-237ENST00000622107 NFAT5O94916 1531 aa20.85■□□□□ 0.93
LTBP4-237ENST00000622107 BARGINQ6ZT62 677 aa20.85■□□□□ 0.93
LTBP4-237ENST00000622107 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.85■□□□□ 0.93
LTBP4-237ENST00000622107 A0A1W2PP64 1363 aa20.85■□□□□ 0.93
LTBP4-237ENST00000622107 SOX12O15370 315 aa20.84■□□□□ 0.93
LTBP4-237ENST00000622107 TCP11L2Q8N4U5 519 aa20.84■□□□□ 0.93
LTBP4-237ENST00000622107 CRB1P82279 1406 aa20.84■□□□□ 0.93
LTBP4-237ENST00000622107 USP31Q70CQ4 1352 aa20.84■□□□□ 0.93
LTBP4-237ENST00000622107 THRAP3Q9Y2W1 955 aaKnown RBP20.83■□□□□ 0.93
LTBP4-237ENST00000622107 USP54Q70EL1 1684 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms