RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 TRIM6-TRIM34B2RNG4 842 aa14.04□□□□□ -0.16
PCDHGA11-203ENST00000622044 PLEKHG5O94827 1062 aa14.04□□□□□ -0.16
PCDHGA11-203ENST00000622044 RBM27Q9P2N5 1060 aaKnown RBP14.04□□□□□ -0.16
PCDHGA11-203ENST00000622044 ERBB4Q15303 1308 aa14.04□□□□□ -0.16
PCDHGA11-203ENST00000622044 NUTM2FA1L443 756 aa14.03□□□□□ -0.16
PCDHGA11-203ENST00000622044 CD2BP2O95400 341 aaKnown RBP14.03□□□□□ -0.16
PCDHGA11-203ENST00000622044 HDAC1Q13547 482 aaPredicted RBP14.03□□□□□ -0.16
PCDHGA11-203ENST00000622044 ZSCAN30Q86W11 494 aa14.03□□□□□ -0.16
PCDHGA11-203ENST00000622044 TRHP20396 242 aaPredicted RBP14.02□□□□□ -0.16
PCDHGA11-203ENST00000622044 NUCB1Q02818 461 aa14.02□□□□□ -0.16
PCDHGA11-203ENST00000622044 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.02□□□□□ -0.16
PCDHGA11-203ENST00000622044 CIZ1Q9ULV3 898 aaPredicted RBP14.02□□□□□ -0.16
PCDHGA11-203ENST00000622044 NOS1P29475 1434 aa14.02□□□□□ -0.16
PCDHGA11-203ENST00000622044 SMARCA5O60264 1052 aaPredicted RBP14.02□□□□□ -0.17
PCDHGA11-203ENST00000622044 BAG4O95429 457 aaKnown RBP14.02□□□□□ -0.17
PCDHGA11-203ENST00000622044 RILPL2Q969X0 211 aa14.02□□□□□ -0.17
PCDHGA11-203ENST00000622044 ASXL2Q76L83 1435 aa14.02□□□□□ -0.17
PCDHGA11-203ENST00000622044 DCTN1Q14203 1278 aa14.02□□□□□ -0.17
PCDHGA11-203ENST00000622044 SMC5Q8IY18 1101 aa14.01□□□□□ -0.17
PCDHGA11-203ENST00000622044 CDC42BPAQ5VT25 1732 aa14.01□□□□□ -0.17
PCDHGA11-203ENST00000622044 ABCC2Q92887 1545 aa14.01□□□□□ -0.17
PCDHGA11-203ENST00000622044 NUCB2P80303 420 aa14.01□□□□□ -0.17
PCDHGA11-203ENST00000622044 TWISTNBQ3B726 338 aaPredicted RBP14.01□□□□□ -0.17
PCDHGA11-203ENST00000622044 ZBTB40Q9NUA8 1239 aa14.01□□□□□ -0.17
PCDHGA11-203ENST00000622044 SYCE3A1L190 88 aa14.01□□□□□ -0.17
PCDHGA11-203ENST00000622044 TPM2P07951 284 aa14.01□□□□□ -0.17
PCDHGA11-203ENST00000622044 CHAMP1Q96JM3 812 aa14.01□□□□□ -0.17
PCDHGA11-203ENST00000622044 ISY1Q9ULR0 285 aaKnown RBP14.01□□□□□ -0.17
PCDHGA11-203ENST00000622044 VGFO15240 615 aaPredicted RBP14□□□□□ -0.17
PCDHGA11-203ENST00000622044 RAB3GAP1Q15042 981 aa14□□□□□ -0.17
PCDHGA11-203ENST00000622044 GCC1Q96CN9 775 aa14□□□□□ -0.17
PCDHGA11-203ENST00000622044 BMP2KLQ5H9B9 411 aa14□□□□□ -0.17
PCDHGA11-203ENST00000622044 TTC37Q6PGP7 1564 aa14□□□□□ -0.17
PCDHGA11-203ENST00000622044 SAMD9LQ8IVG5 1584 aa14□□□□□ -0.17
PCDHGA11-203ENST00000622044 NEK4P51957 841 aa14□□□□□ -0.17
PCDHGA11-203ENST00000622044 C16orf71Q8IYS4 520 aaPredicted RBP14□□□□□ -0.17
PCDHGA11-203ENST00000622044 NECTIN2Q92692 538 aa14□□□□□ -0.17
PCDHGA11-203ENST00000622044 PRAM1Q96QH2 718 aa14□□□□□ -0.17
PCDHGA11-203ENST00000622044 INTS3Q68E01 1043 aaKnown RBP13.99□□□□□ -0.17
PCDHGA11-203ENST00000622044 E9PCH4 1651 aa13.99□□□□□ -0.17
PCDHGA11-203ENST00000622044 CT47B1P0C2W7 299 aaPredicted RBP13.99□□□□□ -0.17
PCDHGA11-203ENST00000622044 CABP1Q9NZU7 370 aa13.99□□□□□ -0.17
PCDHGA11-203ENST00000622044 CROCC2H7BZ55 1655 aa13.99□□□□□ -0.17
PCDHGA11-203ENST00000622044 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.99□□□□□ -0.17
PCDHGA11-203ENST00000622044 NPC1L1Q9UHC9 1359 aa13.99□□□□□ -0.17
PCDHGA11-203ENST00000622044 TSPYL6Q8N831 410 aa13.98□□□□□ -0.17
PCDHGA11-203ENST00000622044 ANO2Q9NQ90 1003 aa13.98□□□□□ -0.17
PCDHGA11-203ENST00000622044 UQCRHLA0A096LP55 91 aa13.98□□□□□ -0.17
PCDHGA11-203ENST00000622044 UQCRHP07919 91 aa13.98□□□□□ -0.17
PCDHGA11-203ENST00000622044 RABEP1Q15276 862 aa13.98□□□□□ -0.17
PCDHGA11-203ENST00000622044 DUOX2Q9NRD8 1548 aa13.98□□□□□ -0.17
PCDHGA11-203ENST00000622044 FANCAO15360 1455 aa13.98□□□□□ -0.17
PCDHGA11-203ENST00000622044 ATAD2Q6PL18 1390 aa13.98□□□□□ -0.17
PCDHGA11-203ENST00000622044 ADCY10Q96PN6 1610 aa13.98□□□□□ -0.17
PCDHGA11-203ENST00000622044 BCL11BQ9C0K0 894 aaPredicted RBP13.97□□□□□ -0.17
PCDHGA11-203ENST00000622044 ESF1Q9H501 851 aaKnown RBP13.97□□□□□ -0.17
PCDHGA11-203ENST00000622044 CCDC27Q2M243 656 aa13.97□□□□□ -0.17
PCDHGA11-203ENST00000622044 TRIM35Q9UPQ4 493 aa13.97□□□□□ -0.17
PCDHGA11-203ENST00000622044 PLCH2O75038 1416 aa13.97□□□□□ -0.17
PCDHGA11-203ENST00000622044 GNAI1P63096 354 aa13.96□□□□□ -0.17
PCDHGA11-203ENST00000622044 KIAA2012Q0VF49 1180 aa13.96□□□□□ -0.17
PCDHGA11-203ENST00000622044 ZGPATQ8N5A5 531 aaKnown RBP13.96□□□□□ -0.17
PCDHGA11-203ENST00000622044 FAM83GA6ND36 823 aa13.96□□□□□ -0.17
PCDHGA11-203ENST00000622044 PKP1Q13835 747 aa13.96□□□□□ -0.17
PCDHGA11-203ENST00000622044 TSHZ3Q63HK5 1081 aa13.96□□□□□ -0.17
PCDHGA11-203ENST00000622044 API5Q9BZZ5 524 aaKnown RBP13.96□□□□□ -0.17
PCDHGA11-203ENST00000622044 GDPD2Q9HCC8 539 aa13.96□□□□□ -0.17
PCDHGA11-203ENST00000622044 PRDM10Q9NQV6 1147 aa13.96□□□□□ -0.17
PCDHGA11-203ENST00000622044 MCCP23508 829 aa13.96□□□□□ -0.18
PCDHGA11-203ENST00000622044 RBM25P49756 843 aaKnown RBP13.96□□□□□ -0.18
PCDHGA11-203ENST00000622044 SNX21Q969T3 373 aa13.96□□□□□ -0.18
PCDHGA11-203ENST00000622044 ADGRL1O94910 1474 aa13.96□□□□□ -0.18
PCDHGA11-203ENST00000622044 CD109Q6YHK3 1445 aa13.95□□□□□ -0.18
PCDHGA11-203ENST00000622044 REC8O95072 547 aa13.95□□□□□ -0.18
PCDHGA11-203ENST00000622044 KLHL40Q2TBA0 621 aa13.95□□□□□ -0.18
PCDHGA11-203ENST00000622044 ZSCAN23Q3MJ62 389 aa13.95□□□□□ -0.18
PCDHGA11-203ENST00000622044 PRIM1P49642 420 aaKnown RBP13.95□□□□□ -0.18
PCDHGA11-203ENST00000622044 CHMP3Q9Y3E7 222 aa13.95□□□□□ -0.18
PCDHGA11-203ENST00000622044 ERVK-7P63135 1459 aa13.95□□□□□ -0.18
PCDHGA11-203ENST00000622044 RRS1Q15050 365 aaKnown RBP13.94□□□□□ -0.18
PCDHGA11-203ENST00000622044 OTUD7AQ8TE49 926 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA11-203ENST00000622044 UGGT1Q9NYU2 1555 aa13.94□□□□□ -0.18
PCDHGA11-203ENST00000622044 MAST1Q9Y2H9 1570 aa13.94□□□□□ -0.18
PCDHGA11-203ENST00000622044 PTPRTO14522 1441 aa13.93□□□□□ -0.18
PCDHGA11-203ENST00000622044 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.93□□□□□ -0.18
PCDHGA11-203ENST00000622044 EMILIN1Q9Y6C2 1016 aa13.93□□□□□ -0.18
PCDHGA11-203ENST00000622044 UPF3BQ9BZI7 483 aaKnown RBP13.93□□□□□ -0.18
PCDHGA11-203ENST00000622044 SYNMO15061 1565 aa13.93□□□□□ -0.18
PCDHGA11-203ENST00000622044 ARHGEF5Q12774 1597 aa13.93□□□□□ -0.18
PCDHGA11-203ENST00000622044 FYB1O15117 783 aa13.92□□□□□ -0.18
PCDHGA11-203ENST00000622044 C14orf93Q9H972 538 aaKnown RBP13.92□□□□□ -0.18
PCDHGA11-203ENST00000622044 SYAP1Q96A49 352 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA11-203ENST00000622044 PHACTR3Q96KR7 559 aa13.92□□□□□ -0.18
PCDHGA11-203ENST00000622044 CFAP44Q96MT7 982 aa13.92□□□□□ -0.18
PCDHGA11-203ENST00000622044 HMMRO75330 724 aa13.91□□□□□ -0.18
PCDHGA11-203ENST00000622044 KRT24Q2M2I5 525 aa13.91□□□□□ -0.18
PCDHGA11-203ENST00000622044 RBSNQ9H1K0 784 aa13.91□□□□□ -0.18
PCDHGA11-203ENST00000622044 PDCL3Q9H2J4 239 aa13.91□□□□□ -0.18
PCDHGA11-203ENST00000622044 MIS18AQ9NYP9 233 aa13.91□□□□□ -0.18
PCDHGA11-203ENST00000622044 ATP10AO60312 1499 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms