RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 C14orf37Q86TY3 774 aa12.17□□□□□ -0.46
GTF2I-219ENST00000621040 LTN1O94822 1766 aa12.17□□□□□ -0.46
GTF2I-219ENST00000621040 LRRC59Q96AG4 307 aaKnown RBP12.17□□□□□ -0.46
GTF2I-219ENST00000621040 PHF8Q9UPP1 1060 aa12.17□□□□□ -0.46
GTF2I-219ENST00000621040 ARHGEF10O15013 1369 aa12.16□□□□□ -0.46
GTF2I-219ENST00000621040 NINLQ9Y2I6 1382 aa12.16□□□□□ -0.46
GTF2I-219ENST00000621040 GLI3P10071 1580 aa12.16□□□□□ -0.46
GTF2I-219ENST00000621040 CDK19Q9BWU1 502 aa12.16□□□□□ -0.46
GTF2I-219ENST00000621040 MINK1Q8N4C8 1332 aaPredicted RBP12.16□□□□□ -0.46
GTF2I-219ENST00000621040 POGKQ9P215 609 aa12.16□□□□□ -0.46
GTF2I-219ENST00000621040 CAMTA1Q9Y6Y1 1673 aa12.16□□□□□ -0.46
GTF2I-219ENST00000621040 DDX17Q92841 729 aaKnown RBP12.15□□□□□ -0.46
GTF2I-219ENST00000621040 USP19O94966 1318 aa12.15□□□□□ -0.46
GTF2I-219ENST00000621040 ATRNO75882 1429 aa12.15□□□□□ -0.46
GTF2I-219ENST00000621040 ATAD2Q6PL18 1390 aa12.15□□□□□ -0.46
GTF2I-219ENST00000621040 FAM208AQ9UK61 1670 aaKnown RBP12.15□□□□□ -0.46
GTF2I-219ENST00000621040 NUDT16Q96DE0 195 aaKnown RBP12.15□□□□□ -0.46
GTF2I-219ENST00000621040 RGPD5Q99666 1765 aa12.15□□□□□ -0.47
GTF2I-219ENST00000621040 USP47Q96K76 1375 aa12.14□□□□□ -0.47
GTF2I-219ENST00000621040 BCL9LQ86UU0 1499 aa12.14□□□□□ -0.47
GTF2I-219ENST00000621040 BRWD3Q6RI45 1802 aa12.14□□□□□ -0.47
GTF2I-219ENST00000621040 ESCO1Q5FWF5 840 aa12.13□□□□□ -0.47
GTF2I-219ENST00000621040 YTHDC1Q96MU7 727 aaKnown RBP12.13□□□□□ -0.47
GTF2I-219ENST00000621040 USP31Q70CQ4 1352 aa12.12□□□□□ -0.47
GTF2I-219ENST00000621040 EVC2Q86UK5 1308 aa12.12□□□□□ -0.47
GTF2I-219ENST00000621040 CCDC61Q9Y6R9 512 aa12.12□□□□□ -0.47
GTF2I-219ENST00000621040 PARP4Q9UKK3 1724 aaKnown RBP12.12□□□□□ -0.47
GTF2I-219ENST00000621040 DISP3Q9P2K9 1392 aa12.12□□□□□ -0.47
GTF2I-219ENST00000621040 CPDO75976 1380 aa12.11□□□□□ -0.47
GTF2I-219ENST00000621040 HIRIP3Q9BW71 556 aaPredicted RBP12.11□□□□□ -0.47
GTF2I-219ENST00000621040 OVOS2A0A0J9YW53 1432 aa12.1□□□□□ -0.47
GTF2I-219ENST00000621040 OVOS2Q6IE36 1432 aa12.1□□□□□ -0.47
GTF2I-219ENST00000621040 KRT28Q7Z3Y7 464 aa12.1□□□□□ -0.47
GTF2I-219ENST00000621040 FNBP4Q8N3X1 1017 aaPredicted RBP12.1□□□□□ -0.47
GTF2I-219ENST00000621040 CARD11Q9BXL7 1154 aa12.1□□□□□ -0.47
GTF2I-219ENST00000621040 UBE2Q2Q8WVN8 375 aa12.1□□□□□ -0.47
GTF2I-219ENST00000621040 ACEP12821 1306 aa12.09□□□□□ -0.47
GTF2I-219ENST00000621040 SAFB2Q14151 953 aaKnown RBP eCLIP12.09□□□□□ -0.47
GTF2I-219ENST00000621040 EDC4Q6P2E9 1401 aaKnown RBP12.09□□□□□ -0.47
GTF2I-219ENST00000621040 FOXO3O43524 673 aa12.09□□□□□ -0.47
GTF2I-219ENST00000621040 PEAK1Q9H792 1746 aa12.08□□□□□ -0.47
GTF2I-219ENST00000621040 PSME1Q06323 249 aa12.08□□□□□ -0.48
GTF2I-219ENST00000621040 SUPT16HQ9Y5B9 1047 aaKnown RBP12.08□□□□□ -0.48
GTF2I-219ENST00000621040 SHANK3Q9BYB0 1731 aa12.07□□□□□ -0.48
GTF2I-219ENST00000621040 CABP2Q9NPB3 220 aa12.06□□□□□ -0.48
GTF2I-219ENST00000621040 A0A1W2PP64 1363 aa12.06□□□□□ -0.48
GTF2I-219ENST00000621040 ANKRD36BQ8N2N9 1353 aa12.06□□□□□ -0.48
GTF2I-219ENST00000621040 ILDR2Q71H61 639 aa12.05□□□□□ -0.48
GTF2I-219ENST00000621040 TTC21AQ8NDW8 1320 aa12.05□□□□□ -0.48
GTF2I-219ENST00000621040 ANO8Q9HCE9 1232 aaPredicted RBP12.05□□□□□ -0.48
GTF2I-219ENST00000621040 LRRC37A3O60309 1634 aa12.05□□□□□ -0.48
GTF2I-219ENST00000621040 ST20-MTHFSA0A0A6YYL1 179 aa12.05□□□□□ -0.48
GTF2I-219ENST00000621040 RGS12O14924 1447 aa12.04□□□□□ -0.48
GTF2I-219ENST00000621040 TNS1Q9HBL0 1735 aaKnown RBP12.04□□□□□ -0.48
GTF2I-219ENST00000621040 RGPD3A6NKT7 1758 aaPredicted RBP12.04□□□□□ -0.48
GTF2I-219ENST00000621040 RGPD4Q7Z3J3 1758 aa12.04□□□□□ -0.48
GTF2I-219ENST00000621040 POTEAQ6S8J7 498 aa12.04□□□□□ -0.48
GTF2I-219ENST00000621040 PMFBP1Q8TBY8 1022 aa12.04□□□□□ -0.48
GTF2I-219ENST00000621040 NUTM2FA1L443 756 aa12.03□□□□□ -0.48
GTF2I-219ENST00000621040 SBF2Q86WG5 1849 aa12.03□□□□□ -0.48
GTF2I-219ENST00000621040 ZNF692Q9BU19 519 aaPredicted RBP12.02□□□□□ -0.48
GTF2I-219ENST00000621040 CABP1Q9NZU7 370 aa12.02□□□□□ -0.49
GTF2I-219ENST00000621040 RGPD2P0DJD1 1756 aa12.02□□□□□ -0.49
GTF2I-219ENST00000621040 COL5A2P05997 1499 aaPredicted RBP12.02□□□□□ -0.49
GTF2I-219ENST00000621040 AFF2P51816 1311 aa12.01□□□□□ -0.49
GTF2I-219ENST00000621040 RGPD1P0DJD0 1748 aa12.01□□□□□ -0.49
GTF2I-219ENST00000621040 XPCQ01831 940 aaPredicted RBP12.01□□□□□ -0.49
GTF2I-219ENST00000621040 TTC21BQ7Z4L5 1316 aa12.01□□□□□ -0.49
GTF2I-219ENST00000621040 ZNF772Q68DY9 489 aaPredicted RBP12.01□□□□□ -0.49
GTF2I-219ENST00000621040 SMG6Q86US8 1419 aaKnown RBP12□□□□□ -0.49
GTF2I-219ENST00000621040 MAP2P11137 1827 aaKnown RBP12□□□□□ -0.49
GTF2I-219ENST00000621040 KTN1Q86UP2 1357 aaKnown RBP12□□□□□ -0.49
GTF2I-219ENST00000621040 SRPK2P78362 688 aaKnown RBP11.99□□□□□ -0.49
GTF2I-219ENST00000621040 CNGB1Q14028 1251 aaPredicted RBP11.99□□□□□ -0.49
GTF2I-219ENST00000621040 NCAPD2Q15021 1401 aa11.99□□□□□ -0.49
GTF2I-219ENST00000621040 AATKQ6ZMQ8 1374 aa11.99□□□□□ -0.49
GTF2I-219ENST00000621040 ONECUT3O60422 494 aaPredicted RBP11.99□□□□□ -0.49
GTF2I-219ENST00000621040 PKD1L3Q7Z443 1732 aa11.98□□□□□ -0.49
GTF2I-219ENST00000621040 NGDNQ8NEJ9 315 aaKnown RBP11.97□□□□□ -0.49
GTF2I-219ENST00000621040 DISP2A7MBM2 1401 aa11.97□□□□□ -0.49
GTF2I-219ENST00000621040 RREB1Q92766 1687 aa11.97□□□□□ -0.49
GTF2I-219ENST00000621040 DAXXQ9UER7 740 aaPredicted RBP11.97□□□□□ -0.49
GTF2I-219ENST00000621040 FAM83GA6ND36 823 aa11.96□□□□□ -0.49
GTF2I-219ENST00000621040 TMF1P82094 1093 aa11.96□□□□□ -0.49
GTF2I-219ENST00000621040 KIAA0232Q92628 1395 aa11.96□□□□□ -0.5
GTF2I-219ENST00000621040 VPS72Q15906 364 aa11.96□□□□□ -0.5
GTF2I-219ENST00000621040 HSPA5P11021 654 aaKnown RBP11.95□□□□□ -0.5
GTF2I-219ENST00000621040 UNC5CLQ8IV45 518 aa11.95□□□□□ -0.5
GTF2I-219ENST00000621040 ERICH6BQ5W0A0 696 aa11.95□□□□□ -0.5
GTF2I-219ENST00000621040 SLC12A5Q9H2X9 1139 aa11.94□□□□□ -0.5
GTF2I-219ENST00000621040 EIF5BO60841 1220 aaKnown RBP11.94□□□□□ -0.5
GTF2I-219ENST00000621040 BLMP54132 1417 aaPredicted RBP11.94□□□□□ -0.5
GTF2I-219ENST00000621040 RTL1A6NKG5 1358 aa11.94□□□□□ -0.5
GTF2I-219ENST00000621040 KIF24Q5T7B8 1368 aa11.94□□□□□ -0.5
GTF2I-219ENST00000621040 CDCA8Q53HL2 280 aa11.93□□□□□ -0.5
GTF2I-219ENST00000621040 BCL9O00512 1426 aa11.93□□□□□ -0.5
GTF2I-219ENST00000621040 C11orf95C9JLR9 678 aaPredicted RBP11.93□□□□□ -0.5
GTF2I-219ENST00000621040 CABLES1Q8TDN4 633 aa11.93□□□□□ -0.5
GTF2I-219ENST00000621040 SPATA31A5Q5VU36 1347 aa11.93□□□□□ -0.5
GTF2I-219ENST00000621040 SPATA31A7Q8IWB4 1347 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms