RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 RLBP1P12271 317 aa10.34□□□□□ -0.75
PTPDC1-204ENST00000620992 XPCQ01831 940 aaPredicted RBP10.34□□□□□ -0.75
PTPDC1-204ENST00000620992 NLRP2Q9NX02 1062 aa10.34□□□□□ -0.75
PTPDC1-204ENST00000620992 POLR3AO14802 1390 aaPredicted RBP10.34□□□□□ -0.75
PTPDC1-204ENST00000620992 NUTM2BA6NNL0 878 aaPredicted RBP10.34□□□□□ -0.75
PTPDC1-204ENST00000620992 NUTM2EB1AL46 878 aaPredicted RBP10.34□□□□□ -0.75
PTPDC1-204ENST00000620992 DNTTIP2Q5QJE6 756 aaKnown RBP10.34□□□□□ -0.75
PTPDC1-204ENST00000620992 NUTM2AQ8IVF1 878 aaPredicted RBP10.34□□□□□ -0.75
PTPDC1-204ENST00000620992 GZF1Q9H116 711 aaPredicted RBP10.34□□□□□ -0.75
PTPDC1-204ENST00000620992 TET3O43151 1660 aa10.34□□□□□ -0.75
PTPDC1-204ENST00000620992 IPO8O15397 1037 aaKnown RBP10.34□□□□□ -0.75
PTPDC1-204ENST00000620992 FOXD4L5Q5VV16 416 aaPredicted RBP10.34□□□□□ -0.75
PTPDC1-204ENST00000620992 FOXD4L4Q8WXT5 416 aaPredicted RBP10.34□□□□□ -0.75
PTPDC1-204ENST00000620992 FOXD4L6Q3SYB3 417 aaPredicted RBP10.33□□□□□ -0.76
PTPDC1-204ENST00000620992 FOXD4L3Q6VB84 417 aaPredicted RBP10.33□□□□□ -0.76
PTPDC1-204ENST00000620992 TSR2Q969E8 191 aaKnown RBP10.33□□□□□ -0.76
PTPDC1-204ENST00000620992 PCDHB15Q9Y5E8 787 aa10.33□□□□□ -0.76
PTPDC1-204ENST00000620992 EVC2Q86UK5 1308 aa10.33□□□□□ -0.76
PTPDC1-204ENST00000620992 PRKCSHP14314 528 aaPredicted RBP10.33□□□□□ -0.76
PTPDC1-204ENST00000620992 KIAA1211Q6ZU35 1233 aa10.33□□□□□ -0.76
PTPDC1-204ENST00000620992 UHRF1BP1LA0JNW5 1464 aa10.33□□□□□ -0.76
PTPDC1-204ENST00000620992 PIP4K2BP78356 416 aa10.32□□□□□ -0.76
PTPDC1-204ENST00000620992 TMX4Q9H1E5 349 aaPredicted RBP10.32□□□□□ -0.76
PTPDC1-204ENST00000620992 RWDD1Q9H446 243 aaPredicted RBP10.32□□□□□ -0.76
PTPDC1-204ENST00000620992 C14orf93Q9H972 538 aaKnown RBP10.32□□□□□ -0.76
PTPDC1-204ENST00000620992 RAD21O60216 631 aa10.32□□□□□ -0.76
PTPDC1-204ENST00000620992 MFAP1P55081 439 aaKnown RBP10.32□□□□□ -0.76
PTPDC1-204ENST00000620992 PPP1R1BQ9UD71 204 aaPredicted RBP10.32□□□□□ -0.76
PTPDC1-204ENST00000620992 PDZRN3Q9UPQ7 1066 aa10.32□□□□□ -0.76
PTPDC1-204ENST00000620992 MYOM1P52179 1685 aa10.32□□□□□ -0.76
PTPDC1-204ENST00000620992 NLRP6P59044 892 aa10.32□□□□□ -0.76
PTPDC1-204ENST00000620992 ABCA6Q8N139 1617 aa10.31□□□□□ -0.76
PTPDC1-204ENST00000620992 MAP3K4Q9Y6R4 1608 aa10.31□□□□□ -0.76
PTPDC1-204ENST00000620992 SAMD1Q6SPF0 538 aaPredicted RBP10.31□□□□□ -0.76
PTPDC1-204ENST00000620992 STRN4Q9NRL3 753 aa10.31□□□□□ -0.76
PTPDC1-204ENST00000620992 CLASP1Q7Z460 1538 aa10.31□□□□□ -0.76
PTPDC1-204ENST00000620992 WDR63Q8IWG1 891 aa10.31□□□□□ -0.76
PTPDC1-204ENST00000620992 GNL2Q13823 731 aaKnown RBP10.31□□□□□ -0.76
PTPDC1-204ENST00000620992 ATF3P18847 181 aa10.3□□□□□ -0.76
PTPDC1-204ENST00000620992 PDE4CQ08493 712 aa10.3□□□□□ -0.76
PTPDC1-204ENST00000620992 AIMP1Q12904 312 aaKnown RBP10.3□□□□□ -0.76
PTPDC1-204ENST00000620992 ZKSCAN2Q63HK3 967 aa10.3□□□□□ -0.76
PTPDC1-204ENST00000620992 TXNDC2Q86VQ3 553 aa10.3□□□□□ -0.76
PTPDC1-204ENST00000620992 ASXL2Q76L83 1435 aa10.3□□□□□ -0.76
PTPDC1-204ENST00000620992 MYOM2P54296 1465 aa10.3□□□□□ -0.76
PTPDC1-204ENST00000620992 NINLQ9Y2I6 1382 aa10.3□□□□□ -0.76
PTPDC1-204ENST00000620992 C1orf141Q5JVX7 400 aa10.3□□□□□ -0.76
PTPDC1-204ENST00000620992 KIF1BO60333 1816 aa10.29□□□□□ -0.76
PTPDC1-204ENST00000620992 DZIP1LQ8IYY4 767 aaKnown RBP10.29□□□□□ -0.76
PTPDC1-204ENST00000620992 EXOSC9Q06265 439 aaKnown RBP10.29□□□□□ -0.76
PTPDC1-204ENST00000620992 ESCO1Q5FWF5 840 aa10.29□□□□□ -0.76
PTPDC1-204ENST00000620992 PROSER2Q86WR7 435 aaPredicted RBP10.29□□□□□ -0.76
PTPDC1-204ENST00000620992 CHMP4BQ9H444 224 aaKnown RBP10.29□□□□□ -0.76
PTPDC1-204ENST00000620992 SBNO2Q9Y2G9 1366 aa10.28□□□□□ -0.76
PTPDC1-204ENST00000620992 MVPQ14764 893 aaKnown RBP10.27□□□□□ -0.76
PTPDC1-204ENST00000620992 HSCBQ8IWL3 235 aa10.27□□□□□ -0.77
PTPDC1-204ENST00000620992 RILPL2Q969X0 211 aa10.27□□□□□ -0.77
PTPDC1-204ENST00000620992 NPATQ14207 1427 aa10.27□□□□□ -0.77
PTPDC1-204ENST00000620992 USP19O94966 1318 aa10.27□□□□□ -0.77
PTPDC1-204ENST00000620992 DEPDC5O75140 1603 aa10.27□□□□□ -0.77
PTPDC1-204ENST00000620992 EFCAB6Q5THR3 1501 aa10.27□□□□□ -0.77
PTPDC1-204ENST00000620992 FBXW7Q969H0 707 aa10.27□□□□□ -0.77
PTPDC1-204ENST00000620992 TTC5Q8N0Z6 440 aa10.26□□□□□ -0.77
PTPDC1-204ENST00000620992 INO80Q9ULG1 1556 aaPredicted RBP10.26□□□□□ -0.77
PTPDC1-204ENST00000620992 RIPK4P57078 832 aa10.26□□□□□ -0.77
PTPDC1-204ENST00000620992 ARAP3Q8WWN8 1544 aa10.26□□□□□ -0.77
PTPDC1-204ENST00000620992 CREBRFQ8IUR6 639 aa10.26□□□□□ -0.77
PTPDC1-204ENST00000620992 ZNF518AQ6AHZ1 1483 aa10.26□□□□□ -0.77
PTPDC1-204ENST00000620992 KIAA1210Q9ULL0 1709 aa10.25□□□□□ -0.77
PTPDC1-204ENST00000620992 TMPOP42166 694 aaKnown RBP10.25□□□□□ -0.77
PTPDC1-204ENST00000620992 CALD1Q05682 793 aaKnown RBP10.25□□□□□ -0.77
PTPDC1-204ENST00000620992 RPGRIP1LQ68CZ1 1315 aa10.25□□□□□ -0.77
PTPDC1-204ENST00000620992 IDI1Q13907 227 aa10.25□□□□□ -0.77
PTPDC1-204ENST00000620992 SSH1Q8WYL5 1049 aa10.25□□□□□ -0.77
PTPDC1-204ENST00000620992 CD109Q6YHK3 1445 aa10.25□□□□□ -0.77
PTPDC1-204ENST00000620992 ABTB2Q8N961 1025 aa10.25□□□□□ -0.77
PTPDC1-204ENST00000620992 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.25□□□□□ -0.77
PTPDC1-204ENST00000620992 PPRC1Q5VV67 1664 aaKnown RBP10.24□□□□□ -0.77
PTPDC1-204ENST00000620992 VWDEQ8N2E2 1590 aa10.24□□□□□ -0.77
PTPDC1-204ENST00000620992 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.24□□□□□ -0.77
PTPDC1-204ENST00000620992 CEBPAP49715 358 aaPredicted RBP10.24□□□□□ -0.77
PTPDC1-204ENST00000620992 ANKRD45Q5TZF3 282 aa10.24□□□□□ -0.77
PTPDC1-204ENST00000620992 PRAM1Q96QH2 718 aa10.24□□□□□ -0.77
PTPDC1-204ENST00000620992 NOB1Q9ULX3 412 aaKnown RBP10.24□□□□□ -0.77
PTPDC1-204ENST00000620992 MROH2AA6NES4 1674 aa10.24□□□□□ -0.77
PTPDC1-204ENST00000620992 TRIM27P14373 513 aa10.24□□□□□ -0.77
PTPDC1-204ENST00000620992 AAMPQ13685 434 aa10.24□□□□□ -0.77
PTPDC1-204ENST00000620992 CCDC27Q2M243 656 aa10.24□□□□□ -0.77
PTPDC1-204ENST00000620992 VPS53Q5VIR6 699 aa10.24□□□□□ -0.77
PTPDC1-204ENST00000620992 C9orf78Q9NZ63 289 aaPredicted RBP10.24□□□□□ -0.77
PTPDC1-204ENST00000620992 ANKRD36BQ8N2N9 1353 aa10.24□□□□□ -0.77
PTPDC1-204ENST00000620992 RAPGEF4Q8WZA2 1011 aa10.24□□□□□ -0.77
PTPDC1-204ENST00000620992 FKBP5Q13451 457 aaPredicted RBP10.23□□□□□ -0.77
PTPDC1-204ENST00000620992 FBLN1P23142 703 aa10.23□□□□□ -0.77
PTPDC1-204ENST00000620992 MCCP23508 829 aa10.23□□□□□ -0.77
PTPDC1-204ENST00000620992 DDX54Q8TDD1 881 aaKnown RBP10.23□□□□□ -0.77
PTPDC1-204ENST00000620992 TBC1D2Q9BYX2 928 aa10.23□□□□□ -0.77
PTPDC1-204ENST00000620992 MROH1Q8NDA8 1641 aa10.23□□□□□ -0.77
PTPDC1-204ENST00000620992 DIAPH1O60610 1272 aaKnown RBP10.23□□□□□ -0.77
PTPDC1-204ENST00000620992 HSP90B1P14625 803 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms