RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 NBPF14Q5TI25 921 aa7.03□□□□□ -1.28
MALAT1-216ENST00000620465 FNBP4Q8N3X1 1017 aaPredicted RBP7.03□□□□□ -1.28
MALAT1-216ENST00000620465 ANKLE1Q8NAG6 615 aa7.03□□□□□ -1.28
MALAT1-216ENST00000620465 UNC93B1Q9H1C4 597 aa7.03□□□□□ -1.28
MALAT1-216ENST00000620465 PPEF1O14829 653 aaPredicted RBP7.01□□□□□ -1.29
MALAT1-216ENST00000620465 IRF5Q13568 498 aa7.01□□□□□ -1.29
MALAT1-216ENST00000620465 WASHC4Q2M389 1173 aa7.01□□□□□ -1.29
MALAT1-216ENST00000620465 PPP1R18Q6NYC8 613 aa7.01□□□□□ -1.29
MALAT1-216ENST00000620465 GPKOWQ92917 476 aaPredicted RBP eCLIP7.01□□□□□ -1.29
MALAT1-216ENST00000620465 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.01□□□□□ -1.29
MALAT1-216ENST00000620465 SUPT5HO00267 1087 aaKnown RBP7□□□□□ -1.29
MALAT1-216ENST00000620465 PTCRAQ6ISU1 281 aaPredicted RBP7□□□□□ -1.29
MALAT1-216ENST00000620465 PLA2G2EQ9NZK7 142 aa7□□□□□ -1.29
MALAT1-216ENST00000620465 ZNF330Q9Y3S2 320 aaPredicted RBP7□□□□□ -1.29
MALAT1-216ENST00000620465 ZBBXA8MT70 800 aa6.98□□□□□ -1.29
MALAT1-216ENST00000620465 ZBTB24O43167 697 aaPredicted RBP6.98□□□□□ -1.29
MALAT1-216ENST00000620465 PLA2G2CQ5R387 149 aa6.98□□□□□ -1.29
MALAT1-216ENST00000620465 GPSM3Q9Y4H4 160 aa6.98□□□□□ -1.29
MALAT1-216ENST00000620465 FBXO45P0C2W1 286 aa6.97□□□□□ -1.29
MALAT1-216ENST00000620465 PTK2Q05397 1052 aa6.97□□□□□ -1.29
MALAT1-216ENST00000620465 VAC14Q08AM6 782 aa6.97□□□□□ -1.29
MALAT1-216ENST00000620465 TRIM32Q13049 653 aa6.97□□□□□ -1.29
MALAT1-216ENST00000620465 NR1H3Q13133 447 aa6.97□□□□□ -1.29
MALAT1-216ENST00000620465 PDXDC2PQ6P474 469 aa6.97□□□□□ -1.29
MALAT1-216ENST00000620465 A0A0G2JS52 829 aa6.96□□□□□ -1.3
MALAT1-216ENST00000620465 LINC01559Q495D7 138 aa6.96□□□□□ -1.3
MALAT1-216ENST00000620465 ZNF511Q8NB15 262 aa6.96□□□□□ -1.3
MALAT1-216ENST00000620465 ZNF777Q9ULD5 760 aaPredicted RBP6.96□□□□□ -1.3
MALAT1-216ENST00000620465 ARID3CA6NKF2 412 aa6.95□□□□□ -1.3
MALAT1-216ENST00000620465 POM121CA8CG34 1229 aa6.95□□□□□ -1.3
MALAT1-216ENST00000620465 SOX11P35716 441 aa6.95□□□□□ -1.3
MALAT1-216ENST00000620465 RPIAP49247 311 aa6.95□□□□□ -1.3
MALAT1-216ENST00000620465 SH3BP5LQ7L8J4 393 aa6.95□□□□□ -1.3
MALAT1-216ENST00000620465 BAP1Q92560 729 aa6.95□□□□□ -1.3
MALAT1-216ENST00000620465 EIF4G2P78344 907 aaKnown RBP eCLIP6.94□□□□□ -1.3
MALAT1-216ENST00000620465 AGERQ15109 404 aa6.94□□□□□ -1.3
MALAT1-216ENST00000620465 BPHLQ86WA6 291 aaPredicted RBP6.94□□□□□ -1.3
MALAT1-216ENST00000620465 GLMNQ92990 594 aa6.94□□□□□ -1.3
MALAT1-216ENST00000620465 ARHGAP9Q9BRR9 750 aa6.94□□□□□ -1.3
MALAT1-216ENST00000620465 PLSCR2Q9NRY7 297 aa6.94□□□□□ -1.3
MALAT1-216ENST00000620465 WNT7BP56706 349 aa6.93□□□□□ -1.3
MALAT1-216ENST00000620465 SH3RF1Q7Z6J0 888 aa6.93□□□□□ -1.3
MALAT1-216ENST00000620465 ZNF592Q92610 1267 aa6.93□□□□□ -1.3
MALAT1-216ENST00000620465 CALR3Q96L12 384 aaKnown RBP6.93□□□□□ -1.3
MALAT1-216ENST00000620465 C1orf115Q9H7X2 142 aa6.93□□□□□ -1.3
MALAT1-216ENST00000620465 MAGEB6P1A0A0J9YX57 407 aa6.92□□□□□ -1.3
MALAT1-216ENST00000620465 CD2BP2O95400 341 aaKnown RBP6.92□□□□□ -1.3
MALAT1-216ENST00000620465 SH3BP2P78314 561 aa6.92□□□□□ -1.3
MALAT1-216ENST00000620465 ZBTB33Q86T24 672 aa6.92□□□□□ -1.3
MALAT1-216ENST00000620465 ADAM32Q8TC27 787 aa6.92□□□□□ -1.3
MALAT1-216ENST00000620465 FOXJ1Q92949 421 aa6.92□□□□□ -1.3
MALAT1-216ENST00000620465 OCSTAMPQ9BR26 566 aa6.92□□□□□ -1.3
MALAT1-216ENST00000620465 CARD14Q9BXL6 1004 aa6.92□□□□□ -1.3
MALAT1-216ENST00000620465 SLC19A1P41440 591 aa6.91□□□□□ -1.3
MALAT1-216ENST00000620465 SEMA3FQ13275 785 aa6.91□□□□□ -1.3
MALAT1-216ENST00000620465 LIAT1Q6ZQX7 453 aa6.91□□□□□ -1.3
MALAT1-216ENST00000620465 PCDHB9Q9Y5E1 797 aa6.91□□□□□ -1.3
MALAT1-216ENST00000620465 C4orf48Q5BLP8 95 aa6.9□□□□□ -1.3
MALAT1-216ENST00000620465 HDGFL1Q5TGJ6 251 aa6.9□□□□□ -1.3
MALAT1-216ENST00000620465 CCDC82Q8N4S0 544 aa6.9□□□□□ -1.3
MALAT1-216ENST00000620465 ADAMTS19Q8TE59 1207 aa6.9□□□□□ -1.3
MALAT1-216ENST00000620465 EMID1Q96A84 441 aaPredicted RBP6.9□□□□□ -1.3
MALAT1-216ENST00000620465 CCDC97Q96F63 343 aaPredicted RBP6.9□□□□□ -1.3
MALAT1-216ENST00000620465 C1QTNF2Q9BXJ5 285 aa6.9□□□□□ -1.3
MALAT1-216ENST00000620465 ALG2Q9H553 416 aa6.9□□□□□ -1.3
MALAT1-216ENST00000620465 MCCD1P59942 119 aaPredicted RBP6.89□□□□□ -1.31
MALAT1-216ENST00000620465 SKOR1P84550 965 aa6.89□□□□□ -1.31
MALAT1-216ENST00000620465 ERFEQ4G0M1 354 aa6.89□□□□□ -1.31
MALAT1-216ENST00000620465 SLC10A4Q96EP9 437 aa6.89□□□□□ -1.31
MALAT1-216ENST00000620465 SERPINA10Q9UK55 444 aa6.89□□□□□ -1.31
MALAT1-216ENST00000620465 VARSP26640 1264 aaKnown RBP6.88□□□□□ -1.31
MALAT1-216ENST00000620465 DZIP3Q86Y13 1208 aaKnown RBP6.88□□□□□ -1.31
MALAT1-216ENST00000620465 EHBP1Q8NDI1 1231 aa6.88□□□□□ -1.31
MALAT1-216ENST00000620465 FAM174AQ8TBP5 190 aa6.88□□□□□ -1.31
MALAT1-216ENST00000620465 NBPF20Q3BBV1 942 aa6.87□□□□□ -1.31
MALAT1-216ENST00000620465 RC3H1Q5TC82 1133 aaKnown RBP6.87□□□□□ -1.31
MALAT1-216ENST00000620465 SPRYD7Q5W111 196 aa6.87□□□□□ -1.31
MALAT1-216ENST00000620465 TRMT44Q8IYL2 757 aaKnown RBP6.87□□□□□ -1.31
MALAT1-216ENST00000620465 PRKD2Q9BZL6 878 aa6.87□□□□□ -1.31
MALAT1-216ENST00000620465 CDV3Q9UKY7 258 aaKnown RBP6.87□□□□□ -1.31
MALAT1-216ENST00000620465 V9GY48 417 aaPredicted RBP6.87□□□□□ -1.31
MALAT1-216ENST00000620465 WNT7AO00755 349 aa6.86□□□□□ -1.31
MALAT1-216ENST00000620465 ARID3AQ99856 593 aa6.86□□□□□ -1.31
MALAT1-216ENST00000620465 ZNF697Q5TEC3 545 aa6.85□□□□□ -1.31
MALAT1-216ENST00000620465 ZNF598Q86UK7 904 aaKnown RBP6.85□□□□□ -1.31
MALAT1-216ENST00000620465 UCN2Q96RP3 112 aa6.85□□□□□ -1.31
MALAT1-216ENST00000620465 SLFNL1Q499Z3 407 aa6.84□□□□□ -1.31
MALAT1-216ENST00000620465 CEP126Q9P2H0 1117 aa6.84□□□□□ -1.31
MALAT1-216ENST00000620465 MAP4K5Q9Y4K4 846 aa6.84□□□□□ -1.31
MALAT1-216ENST00000620465 RNF135Q8IUD6 432 aa6.83□□□□□ -1.32
MALAT1-216ENST00000620465 NFATC2IPQ8NCF5 419 aa6.83□□□□□ -1.32
MALAT1-216ENST00000620465 MRGPRX2Q96LB1 330 aa6.83□□□□□ -1.32
MALAT1-216ENST00000620465 VASH1Q7L8A9 365 aaPredicted RBP6.82□□□□□ -1.32
MALAT1-216ENST00000620465 PPP1R12CQ9BZL4 782 aa6.82□□□□□ -1.32
MALAT1-216ENST00000620465 TLL2Q9Y6L7 1015 aa6.82□□□□□ -1.32
MALAT1-216ENST00000620465 PALM3A6NDB9 673 aaPredicted RBP6.81□□□□□ -1.32
MALAT1-216ENST00000620465 PIK3CDO00329 1044 aa6.81□□□□□ -1.32
MALAT1-216ENST00000620465 RGS20O76081 388 aa6.81□□□□□ -1.32
MALAT1-216ENST00000620465 FOXC1Q12948 553 aa6.81□□□□□ -1.32
MALAT1-216ENST00000620465 RNF20Q5VTR2 975 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms