RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 RIMS2Q9UQ26 1411 aa13.31□□□□□ -0.28
TP53-225ENST00000619485 SPATA31D1Q6ZQQ2 1576 aa13.31□□□□□ -0.28
TP53-225ENST00000619485 REREQ9P2R6 1566 aa13.31□□□□□ -0.28
TP53-225ENST00000619485 SETD1AO15047 1707 aaKnown RBP13.31□□□□□ -0.28
TP53-225ENST00000619485 BCL2L13Q9BXK5 485 aa13.31□□□□□ -0.28
TP53-225ENST00000619485 SLKQ9H2G2 1235 aaPredicted RBP13.31□□□□□ -0.28
TP53-225ENST00000619485 GGNBP2Q9H3C7 697 aa13.3□□□□□ -0.28
TP53-225ENST00000619485 A0A1W2PP64 1363 aa13.3□□□□□ -0.28
TP53-225ENST00000619485 SHPRHQ149N8 1683 aa13.29□□□□□ -0.28
TP53-225ENST00000619485 SEC24BO95487 1268 aa13.29□□□□□ -0.28
TP53-225ENST00000619485 MORC1Q86VD1 984 aa13.29□□□□□ -0.28
TP53-225ENST00000619485 TXNDC2Q86VQ3 553 aa13.29□□□□□ -0.28
TP53-225ENST00000619485 POGKQ9P215 609 aa13.29□□□□□ -0.28
TP53-225ENST00000619485 CD163L1Q9NR16 1453 aa13.28□□□□□ -0.28
TP53-225ENST00000619485 ARXQ96QS3 562 aa13.28□□□□□ -0.28
TP53-225ENST00000619485 PLEKHG5O94827 1062 aa13.28□□□□□ -0.28
TP53-225ENST00000619485 TRHP20396 242 aaPredicted RBP13.28□□□□□ -0.28
TP53-225ENST00000619485 TRMT2AQ8IZ69 625 aaKnown RBP13.28□□□□□ -0.28
TP53-225ENST00000619485 CLUAP1Q96AJ1 413 aa13.28□□□□□ -0.28
TP53-225ENST00000619485 ZRANB1Q9UGI0 708 aa13.28□□□□□ -0.28
TP53-225ENST00000619485 ZFYVE9O95405 1425 aa13.27□□□□□ -0.29
TP53-225ENST00000619485 NUTM2FA1L443 756 aa13.27□□□□□ -0.29
TP53-225ENST00000619485 CDK19Q9BWU1 502 aa13.27□□□□□ -0.29
TP53-225ENST00000619485 EVC2Q86UK5 1308 aa13.27□□□□□ -0.29
TP53-225ENST00000619485 LTKP29376 864 aa13.26□□□□□ -0.29
TP53-225ENST00000619485 MTHFSP49914 203 aa13.26□□□□□ -0.29
TP53-225ENST00000619485 WWC1Q8IX03 1113 aa13.26□□□□□ -0.29
TP53-225ENST00000619485 CABP1Q9NZU7 370 aa13.26□□□□□ -0.29
TP53-225ENST00000619485 CGNL1Q0VF96 1302 aa13.26□□□□□ -0.29
TP53-225ENST00000619485 SPRYD3Q8NCJ5 442 aa13.24□□□□□ -0.29
TP53-225ENST00000619485 TNNQ9UQP3 1299 aa13.24□□□□□ -0.29
TP53-225ENST00000619485 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.24□□□□□ -0.29
TP53-225ENST00000619485 NPC1L1Q9UHC9 1359 aa13.24□□□□□ -0.29
TP53-225ENST00000619485 BECN1Q14457 450 aa13.23□□□□□ -0.29
TP53-225ENST00000619485 SLC26A8Q96RN1 970 aa13.23□□□□□ -0.29
TP53-225ENST00000619485 ESF1Q9H501 851 aaKnown RBP13.23□□□□□ -0.29
TP53-225ENST00000619485 PDE3AQ14432 1141 aa13.22□□□□□ -0.29
TP53-225ENST00000619485 ANKRD36BQ8N2N9 1353 aa13.22□□□□□ -0.29
TP53-225ENST00000619485 TNRQ92752 1358 aa13.22□□□□□ -0.29
TP53-225ENST00000619485 MAPK8IP3Q9UPT6 1336 aa13.22□□□□□ -0.29
TP53-225ENST00000619485 UPF2Q9HAU5 1272 aaKnown RBP13.22□□□□□ -0.29
TP53-225ENST00000619485 USP19O94966 1318 aa13.22□□□□□ -0.29
TP53-225ENST00000619485 UBR1Q8IWV7 1749 aa13.22□□□□□ -0.29
TP53-225ENST00000619485 RLBP1P12271 317 aa13.21□□□□□ -0.29
TP53-225ENST00000619485 TCP11L2Q8N4U5 519 aa13.21□□□□□ -0.29
TP53-225ENST00000619485 FYB1O15117 783 aa13.2□□□□□ -0.3
TP53-225ENST00000619485 NLRP1Q9C000 1473 aa13.2□□□□□ -0.3
TP53-225ENST00000619485 PCDHB15Q9Y5E8 787 aa13.2□□□□□ -0.3
TP53-225ENST00000619485 RARSP54136 660 aaKnown RBP13.19□□□□□ -0.3
TP53-225ENST00000619485 ROBO2Q9HCK4 1378 aa13.19□□□□□ -0.3
TP53-225ENST00000619485 C3P01024 1663 aa13.18□□□□□ -0.3
TP53-225ENST00000619485 RBM33Q96EV2 1170 aaKnown RBP13.18□□□□□ -0.3
TP53-225ENST00000619485 PRR36Q9H6K5 1346 aa13.18□□□□□ -0.3
TP53-225ENST00000619485 PMFBP1Q8TBY8 1022 aa13.17□□□□□ -0.3
TP53-225ENST00000619485 RUNDC1Q96C34 613 aa13.17□□□□□ -0.3
TP53-225ENST00000619485 PDZRN3Q9UPQ7 1066 aa13.17□□□□□ -0.3
TP53-225ENST00000619485 ABCC11Q96J66 1382 aa13.17□□□□□ -0.3
TP53-225ENST00000619485 USP32Q8NFA0 1604 aa13.17□□□□□ -0.3
TP53-225ENST00000619485 NME9Q86XW9 330 aa13.17□□□□□ -0.3
TP53-225ENST00000619485 FTSJ3Q8IY81 847 aaKnown RBP13.17□□□□□ -0.3
TP53-225ENST00000619485 POLR3AO14802 1390 aaPredicted RBP13.17□□□□□ -0.3
TP53-225ENST00000619485 ADAMTS13Q76LX8 1427 aa13.17□□□□□ -0.3
TP53-225ENST00000619485 PTPRUQ92729 1446 aa13.17□□□□□ -0.3
TP53-225ENST00000619485 TMEM2Q9UHN6 1383 aa13.16□□□□□ -0.3
TP53-225ENST00000619485 U2AF1L5P0DN76 240 aaPredicted RBP13.16□□□□□ -0.3
TP53-225ENST00000619485 U2AF1Q01081 240 aaKnown RBP eCLIP13.16□□□□□ -0.35e-7■■■■□ 23
TP53-225ENST00000619485 IFNLR1Q8IU57 520 aaPredicted RBP13.16□□□□□ -0.3
TP53-225ENST00000619485 PODXL2Q9NZ53 605 aa13.16□□□□□ -0.3
TP53-225ENST00000619485 CPS1P31327 1500 aa13.15□□□□□ -0.3
TP53-225ENST00000619485 GZF1Q9H116 711 aaPredicted RBP13.15□□□□□ -0.3
TP53-225ENST00000619485 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.15□□□□□ -0.3
TP53-225ENST00000619485 U2SURPO15042 1029 aaKnown RBP13.14□□□□□ -0.31
TP53-225ENST00000619485 NGEFQ8N5V2 710 aa13.14□□□□□ -0.31
TP53-225ENST00000619485 MFAP1P55081 439 aaKnown RBP13.14□□□□□ -0.31
TP53-225ENST00000619485 TSR2Q969E8 191 aaKnown RBP13.14□□□□□ -0.31
TP53-225ENST00000619485 CFAP53Q96M91 514 aa13.14□□□□□ -0.31
TP53-225ENST00000619485 RWDD1Q9H446 243 aaPredicted RBP13.14□□□□□ -0.31
TP53-225ENST00000619485 NINLQ9Y2I6 1382 aa13.14□□□□□ -0.31
TP53-225ENST00000619485 COL3A1P02461 1466 aaPredicted RBP13.14□□□□□ -0.31
TP53-225ENST00000619485 FER1L4A9Z1Z3 1794 aa13.13□□□□□ -0.31
TP53-225ENST00000619485 IQSEC2Q5JU85 1478 aa13.13□□□□□ -0.31
TP53-225ENST00000619485 TBC1D2Q9BYX2 928 aa13.13□□□□□ -0.31
TP53-225ENST00000619485 EMILIN1Q9Y6C2 1016 aa13.13□□□□□ -0.31
TP53-225ENST00000619485 PPIP5K1Q6PFW1 1433 aa13.12□□□□□ -0.31
TP53-225ENST00000619485 WASLO00401 505 aaPredicted RBP13.12□□□□□ -0.31
TP53-225ENST00000619485 HOXD11P31277 338 aaPredicted RBP13.12□□□□□ -0.31
TP53-225ENST00000619485 TBC1D32Q96NH3 1257 aa13.12□□□□□ -0.31
TP53-225ENST00000619485 KIF20BQ96Q89 1820 aa13.12□□□□□ -0.31
TP53-225ENST00000619485 NUDT16Q96DE0 195 aaKnown RBP13.11□□□□□ -0.31
TP53-225ENST00000619485 SOX12O15370 315 aa13.11□□□□□ -0.31
TP53-225ENST00000619485 RRS1Q15050 365 aaKnown RBP13.11□□□□□ -0.31
TP53-225ENST00000619485 ITPRIPQ8IWB1 547 aa13.11□□□□□ -0.31
TP53-225ENST00000619485 MYH16Q9H6N6 1097 aa13.11□□□□□ -0.31
TP53-225ENST00000619485 SMC4Q9NTJ3 1288 aa13.11□□□□□ -0.31
TP53-225ENST00000619485 ATAD2Q6PL18 1390 aa13.11□□□□□ -0.31
TP53-225ENST00000619485 DLC1Q96QB1 1528 aa13.1□□□□□ -0.31
TP53-225ENST00000619485 MVPQ14764 893 aaKnown RBP13.09□□□□□ -0.31
TP53-225ENST00000619485 WDR63Q8IWG1 891 aa13.09□□□□□ -0.31
TP53-225ENST00000619485 DZIP1LQ8IYY4 767 aaKnown RBP13.09□□□□□ -0.31
TP53-225ENST00000619485 ANKRD26Q9UPS8 1709 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms