RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 U2AF1L5P0DN76 240 aaPredicted RBP38.67■■■■□ 3.78
KHSRP-213ENST00000619396 U2AF1Q01081 240 aaKnown RBP eCLIP38.67■■■■□ 3.783e-11■■■■□ 22.7
KHSRP-213ENST00000619396 NLRP1Q9C000 1473 aa38.67■■■■□ 3.78
KHSRP-213ENST00000619396 METP08581 1390 aa38.66■■■■□ 3.78
KHSRP-213ENST00000619396 FRAT1Q92837 279 aaPredicted RBP38.64■■■■□ 3.78
KHSRP-213ENST00000619396 DLC1Q96QB1 1528 aa38.64■■■■□ 3.78
KHSRP-213ENST00000619396 HDGFL2Q7Z4V5 671 aaPredicted RBP38.63■■■■□ 3.77
KHSRP-213ENST00000619396 ANKRD26Q9UPS8 1709 aa38.62■■■■□ 3.77
KHSRP-213ENST00000619396 AAMPQ13685 434 aa38.62■■■■□ 3.77
KHSRP-213ENST00000619396 VIRMAQ69YN4 1812 aaKnown RBP38.6■■■■□ 3.77
KHSRP-213ENST00000619396 TXNDC2Q86VQ3 553 aa38.59■■■■□ 3.77
KHSRP-213ENST00000619396 MAPK8IP3Q9UPT6 1336 aa38.59■■■■□ 3.77
KHSRP-213ENST00000619396 DAXXQ9UER7 740 aaPredicted RBP38.59■■■■□ 3.77
KHSRP-213ENST00000619396 SUGP2Q8IX01 1082 aaKnown RBP eCLIP38.58■■■■□ 3.77
KHSRP-213ENST00000619396 ADGRB2O60241 1585 aa38.58■■■■□ 3.77
KHSRP-213ENST00000619396 TNRQ92752 1358 aa38.57■■■■□ 3.77
KHSRP-213ENST00000619396 U2SURPO15042 1029 aaKnown RBP38.57■■■■□ 3.77
KHSRP-213ENST00000619396 RLBP1P12271 317 aa38.57■■■■□ 3.77
KHSRP-213ENST00000619396 COL3A1P02461 1466 aaPredicted RBP38.56■■■■□ 3.76
KHSRP-213ENST00000619396 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.56■■■■□ 3.76
KHSRP-213ENST00000619396 FBLN1P23142 703 aa38.55■■■■□ 3.76
KHSRP-213ENST00000619396 TNNQ9UQP3 1299 aa38.55■■■■□ 3.76
KHSRP-213ENST00000619396 USP19O94966 1318 aa38.55■■■■□ 3.76
KHSRP-213ENST00000619396 KIF20BQ96Q89 1820 aa38.54■■■■□ 3.76
KHSRP-213ENST00000619396 NFKBIBQ15653 356 aa38.54■■■■□ 3.76
KHSRP-213ENST00000619396 MYH16Q9H6N6 1097 aa38.54■■■■□ 3.76
KHSRP-213ENST00000619396 MED14O60244 1454 aa38.53■■■■□ 3.76
KHSRP-213ENST00000619396 PMFBP1Q8TBY8 1022 aa38.53■■■■□ 3.76
KHSRP-213ENST00000619396 PCDHB15Q9Y5E8 787 aa38.53■■■■□ 3.76
KHSRP-213ENST00000619396 BCL2L13Q9BXK5 485 aa38.49■■■■□ 3.75
KHSRP-213ENST00000619396 NCKAP5LQ9HCH0 1330 aa38.49■■■■□ 3.75
KHSRP-213ENST00000619396 WASLO00401 505 aaPredicted RBP38.48■■■■□ 3.75
KHSRP-213ENST00000619396 UBR1Q8IWV7 1749 aa38.48■■■■□ 3.75
KHSRP-213ENST00000619396 PLEKHF1Q96S99 279 aa38.47■■■■□ 3.75
KHSRP-213ENST00000619396 CEBPAP49715 358 aaPredicted RBP38.46■■■■□ 3.75
KHSRP-213ENST00000619396 TMEM2Q9UHN6 1383 aa38.44■■■■□ 3.74
KHSRP-213ENST00000619396 ATP7BP35670 1465 aa38.44■■■■□ 3.74
KHSRP-213ENST00000619396 SEC24BO95487 1268 aa38.43■■■■□ 3.74
KHSRP-213ENST00000619396 PPIP5K1Q6PFW1 1433 aa38.42■■■■□ 3.74
KHSRP-213ENST00000619396 CT47B1P0C2W7 299 aaPredicted RBP38.41■■■■□ 3.74
KHSRP-213ENST00000619396 DIAPH1O60610 1272 aaKnown RBP38.39■■■■□ 3.74
KHSRP-213ENST00000619396 HDGFP51858 240 aaKnown RBP38.39■■■■□ 3.74
KHSRP-213ENST00000619396 PLPPR3Q6T4P5 718 aa38.39■■■■□ 3.74
KHSRP-213ENST00000619396 ZRANB1Q9UGI0 708 aa38.39■■■■□ 3.74
KHSRP-213ENST00000619396 TMPOP42166 694 aaKnown RBP38.38■■■■□ 3.73
KHSRP-213ENST00000619396 NUDT16Q96DE0 195 aaKnown RBP38.38■■■■□ 3.73
KHSRP-213ENST00000619396 PNPLA6Q8IY17 1366 aa38.37■■■■□ 3.73
KHSRP-213ENST00000619396 MVPQ14764 893 aaKnown RBP38.37■■■■□ 3.73
KHSRP-213ENST00000619396 PDZRN3Q9UPQ7 1066 aa38.37■■■■□ 3.73
KHSRP-213ENST00000619396 KNDC1Q76NI1 1749 aa38.37■■■■□ 3.73
KHSRP-213ENST00000619396 LTKP29376 864 aa38.36■■■■□ 3.73
KHSRP-213ENST00000619396 NME9Q86XW9 330 aa38.36■■■■□ 3.73
KHSRP-213ENST00000619396 RWDD1Q9H446 243 aaPredicted RBP38.36■■■■□ 3.73
KHSRP-213ENST00000619396 POLKQ9UBT6 870 aa38.36■■■■□ 3.73
KHSRP-213ENST00000619396 TRIM35Q9UPQ4 493 aa38.36■■■■□ 3.73
KHSRP-213ENST00000619396 CPSF1Q10570 1443 aaKnown RBP38.36■■■■□ 3.73
KHSRP-213ENST00000619396 ZKSCAN2Q63HK3 967 aa38.35■■■■□ 3.73
KHSRP-213ENST00000619396 TSR2Q969E8 191 aaKnown RBP38.34■■■■□ 3.73
KHSRP-213ENST00000619396 TECPR2O15040 1411 aa38.34■■■■□ 3.73
KHSRP-213ENST00000619396 MAP2P11137 1827 aaKnown RBP38.33■■■■□ 3.73
KHSRP-213ENST00000619396 ROBO2Q9HCK4 1378 aa38.33■■■■□ 3.73
KHSRP-213ENST00000619396 FAM135BQ49AJ0 1406 aa38.33■■■■□ 3.73
KHSRP-213ENST00000619396 ADAMTS13Q76LX8 1427 aa38.33■■■■□ 3.73
KHSRP-213ENST00000619396 CPS1P31327 1500 aa38.31■■■■□ 3.72
KHSRP-213ENST00000619396 GSE1Q14687 1217 aa38.31■■■■□ 3.72
KHSRP-213ENST00000619396 DZIP1LQ8IYY4 767 aaKnown RBP38.31■■■■□ 3.72
KHSRP-213ENST00000619396 EXOSC9Q06265 439 aaKnown RBP38.3■■■■□ 3.72
KHSRP-213ENST00000619396 PRR36Q9H6K5 1346 aa38.29■■■■□ 3.72
KHSRP-213ENST00000619396 EDC4Q6P2E9 1401 aaKnown RBP38.28■■■■□ 3.72
KHSRP-213ENST00000619396 EMILIN1Q9Y6C2 1016 aa38.28■■■■□ 3.72
KHSRP-213ENST00000619396 IL16Q14005 1332 aa38.28■■■■□ 3.72
KHSRP-213ENST00000619396 SIRT1Q96EB6 747 aa38.27■■■■□ 3.72
KHSRP-213ENST00000619396 CCDC61Q9Y6R9 512 aa38.27■■■■□ 3.72
KHSRP-213ENST00000619396 RIPK4P57078 832 aa38.26■■■■□ 3.71
KHSRP-213ENST00000619396 CDC42BPGQ6DT37 1551 aa38.25■■■■□ 3.71
KHSRP-213ENST00000619396 SLC26A8Q96RN1 970 aa38.24■■■■□ 3.71
KHSRP-213ENST00000619396 FTSJ3Q8IY81 847 aaKnown RBP38.24■■■■□ 3.71
KHSRP-213ENST00000619396 SMC4Q9NTJ3 1288 aa38.23■■■■□ 3.71
KHSRP-213ENST00000619396 FRAT2O75474 233 aaPredicted RBP38.23■■■■□ 3.71
KHSRP-213ENST00000619396 SSH1Q8WYL5 1049 aa38.23■■■■□ 3.71
KHSRP-213ENST00000619396 LRRC7Q96NW7 1537 aa38.23■■■■□ 3.71
KHSRP-213ENST00000619396 NUTM2FA1L443 756 aa38.22■■■■□ 3.71
KHSRP-213ENST00000619396 TRIM27P14373 513 aa38.22■■■■□ 3.71
KHSRP-213ENST00000619396 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.21■■■■□ 3.71
KHSRP-213ENST00000619396 MON2Q7Z3U7 1717 aa38.2■■■■□ 3.71
KHSRP-213ENST00000619396 PRKAR2BP31323 418 aa38.2■■■■□ 3.71
KHSRP-213ENST00000619396 PLEKHG1Q9ULL1 1385 aa38.19■■■■□ 3.7
KHSRP-213ENST00000619396 HMOX1P09601 288 aa38.19■■■■□ 3.7
KHSRP-213ENST00000619396 RSPH6AQ9H0K4 717 aa38.19■■■■□ 3.7
KHSRP-213ENST00000619396 C3P01024 1663 aa38.19■■■■□ 3.7
KHSRP-213ENST00000619396 BECN1Q14457 450 aa38.18■■■■□ 3.7
KHSRP-213ENST00000619396 TBC1D32Q96NH3 1257 aa38.18■■■■□ 3.7
KHSRP-213ENST00000619396 AKAP12Q02952 1782 aa38.17■■■■□ 3.7
KHSRP-213ENST00000619396 FCHSD2O94868 740 aa38.16■■■■□ 3.7
KHSRP-213ENST00000619396 RRS1Q15050 365 aaKnown RBP38.16■■■■□ 3.7
KHSRP-213ENST00000619396 ATF7IPQ6VMQ6 1270 aa38.16■■■■□ 3.7
KHSRP-213ENST00000619396 ITSN1Q15811 1721 aa38.15■■■■□ 3.7
KHSRP-213ENST00000619396 HDAC1Q13547 482 aaPredicted RBP38.15■■■■□ 3.7
KHSRP-213ENST00000619396 PTPRUQ92729 1446 aa38.15■■■■□ 3.7
KHSRP-213ENST00000619396 IL27Q8NEV9 243 aa38.14■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms