RNA–Protein interactions for RNA: ENST00000619193.4

RDM1-223, Transcript of RAD52 motif containing 1, human

TSL 1 (best)

Gene RDM1, Length 686 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDM1-223	ENST00000619193	USP19	O94966	1318 aa		7.81	□□□□□ -1.16
RDM1-223	ENST00000619193	ARHGEF28	Q8N1W1	1705 aa	Known RBP	7.81	□□□□□ -1.16
RDM1-223	ENST00000619193	NUTM2B	A6NNL0	878 aa	Predicted RBP	7.81	□□□□□ -1.16
RDM1-223	ENST00000619193	NUTM2E	B1AL46	878 aa	Predicted RBP	7.81	□□□□□ -1.16
RDM1-223	ENST00000619193	CFAP70	Q5T0N1	1121 aa		7.81	□□□□□ -1.16
RDM1-223	ENST00000619193	MEX3C	Q5U5Q3	659 aa	Known RBP	7.81	□□□□□ -1.16
RDM1-223	ENST00000619193	NUTM2D	Q5VT03	806 aa	Predicted RBP	7.81	□□□□□ -1.16
RDM1-223	ENST00000619193	NUTM2A	Q8IVF1	878 aa	Predicted RBP	7.81	□□□□□ -1.16
RDM1-223	ENST00000619193	ZBTB47	Q9UFB7	747 aa	Predicted RBP	7.81	□□□□□ -1.16
RDM1-223	ENST00000619193	NOS1	P29475	1434 aa		7.8	□□□□□ -1.16
RDM1-223	ENST00000619193	ABCC3	O15438	1527 aa		7.8	□□□□□ -1.16
RDM1-223	ENST00000619193	PITPNM1	O00562	1244 aa		7.8	□□□□□ -1.16
RDM1-223	ENST00000619193	GOLGA2	Q08379	1002 aa		7.8	□□□□□ -1.16
RDM1-223	ENST00000619193	NBR1	Q14596	966 aa		7.8	□□□□□ -1.16
RDM1-223	ENST00000619193	CENPQ	Q7L2Z9	268 aa	Predicted RBP	7.8	□□□□□ -1.16
RDM1-223	ENST00000619193	ANKLE2	Q86XL3	938 aa		7.8	□□□□□ -1.16
RDM1-223	ENST00000619193	KNSTRN	Q9Y448	316 aa		7.8	□□□□□ -1.16
RDM1-223	ENST00000619193	COL3A1	P02461	1466 aa	Predicted RBP	7.8	□□□□□ -1.16
RDM1-223	ENST00000619193	NEXMIF	Q5QGS0	1516 aa		7.79	□□□□□ -1.16
RDM1-223	ENST00000619193	YY1	P25490	414 aa		7.79	□□□□□ -1.16
RDM1-223	ENST00000619193	CDCA8	Q53HL2	280 aa		7.79	□□□□□ -1.16
RDM1-223	ENST00000619193	FBXO31	Q5XUX0	539 aa	Predicted RBP	7.79	□□□□□ -1.16
RDM1-223	ENST00000619193	KANK1	Q14678	1352 aa		7.79	□□□□□ -1.16
RDM1-223	ENST00000619193	TNR	Q92752	1358 aa		7.79	□□□□□ -1.16
RDM1-223	ENST00000619193	APAF1	O14727	1248 aa		7.77	□□□□□ -1.17
RDM1-223	ENST00000619193	CCDC146	Q8IYE0	955 aa		7.77	□□□□□ -1.17
RDM1-223	ENST00000619193	NSD3	Q9BZ95	1437 aa		7.77	□□□□□ -1.17
RDM1-223	ENST00000619193	AFF2	P51816	1311 aa		7.77	□□□□□ -1.17
RDM1-223	ENST00000619193	TMEM94	Q12767	1356 aa		7.76	□□□□□ -1.17
RDM1-223	ENST00000619193	ATAD2	Q6PL18	1390 aa		7.76	□□□□□ -1.17
RDM1-223	ENST00000619193	NINL	Q9Y2I6	1382 aa		7.76	□□□□□ -1.17
RDM1-223	ENST00000619193	ANKRD26	Q9UPS8	1709 aa		7.76	□□□□□ -1.17
RDM1-223	ENST00000619193	KIF3B	O15066	747 aa		7.76	□□□□□ -1.17
RDM1-223	ENST00000619193	BCAR3	O75815	825 aa		7.76	□□□□□ -1.17
RDM1-223	ENST00000619193	IGHD	P01880	384 aa		7.76	□□□□□ -1.17
RDM1-223	ENST00000619193	WDR43	Q15061	677 aa	Known RBP eCLIP	7.76	□□□□□ -1.17
RDM1-223	ENST00000619193	FAM161A	Q3B820	660 aa		7.76	□□□□□ -1.17
RDM1-223	ENST00000619193	NGEF	Q8N5V2	710 aa		7.76	□□□□□ -1.17
RDM1-223	ENST00000619193	SPDYE1	Q8NFV5	336 aa	Predicted RBP	7.76	□□□□□ -1.17
RDM1-223	ENST00000619193	C14orf93	Q9H972	538 aa	Known RBP	7.76	□□□□□ -1.17
RDM1-223	ENST00000619193	NHSL1	Q5SYE7	1610 aa		7.75	□□□□□ -1.17
RDM1-223	ENST00000619193		E9PSI1	815 aa		7.75	□□□□□ -1.17
RDM1-223	ENST00000619193	GGT6	Q6P531	493 aa		7.75	□□□□□ -1.17
RDM1-223	ENST00000619193	NPM2	Q86SE8	214 aa	Known RBP	7.75	□□□□□ -1.17
RDM1-223	ENST00000619193	USP35	Q9P2H5	1018 aa		7.75	□□□□□ -1.17
RDM1-223	ENST00000619193	LAS1L	Q9Y4W2	734 aa	Known RBP	7.75	□□□□□ -1.17
RDM1-223	ENST00000619193	PDE3A	Q14432	1141 aa		7.74	□□□□□ -1.17
RDM1-223	ENST00000619193	WWC1	Q8IX03	1113 aa		7.74	□□□□□ -1.17
RDM1-223	ENST00000619193	PUS7	Q96PZ0	661 aa	Known RBP	7.74	□□□□□ -1.17
RDM1-223	ENST00000619193	ZFYVE9	O95405	1425 aa		7.74	□□□□□ -1.17
RDM1-223	ENST00000619193	SPATA31A6	Q5VVP1	1343 aa		7.74	□□□□□ -1.17
RDM1-223	ENST00000619193	CENPJ	Q9HC77	1338 aa	Predicted RBP	7.74	□□□□□ -1.17
RDM1-223	ENST00000619193	CD163L1	Q9NR16	1453 aa		7.74	□□□□□ -1.17
RDM1-223	ENST00000619193	DIP2A	Q14689	1571 aa		7.73	□□□□□ -1.17
RDM1-223	ENST00000619193	CDC42BPG	Q6DT37	1551 aa		7.73	□□□□□ -1.17
RDM1-223	ENST00000619193	ARHGAP31	Q2M1Z3	1444 aa		7.73	□□□□□ -1.17
RDM1-223	ENST00000619193	PPM1G	O15355	546 aa	Predicted RBP	7.73	□□□□□ -1.17
RDM1-223	ENST00000619193	POTEH	Q6S545	545 aa		7.73	□□□□□ -1.17
RDM1-223	ENST00000619193	TNN	Q9UQP3	1299 aa		7.73	□□□□□ -1.17
RDM1-223	ENST00000619193	PSD	A5PKW4	1024 aa	Predicted RBP	7.72	□□□□□ -1.17
RDM1-223	ENST00000619193	SLC24A1	O60721	1099 aa		7.72	□□□□□ -1.17
RDM1-223	ENST00000619193	CCDC27	Q2M243	656 aa		7.72	□□□□□ -1.17
RDM1-223	ENST00000619193	DDRGK1	Q96HY6	314 aa		7.72	□□□□□ -1.17
RDM1-223	ENST00000619193	BCL9L	Q86UU0	1499 aa		7.72	□□□□□ -1.17
RDM1-223	ENST00000619193	RPGRIP1L	Q68CZ1	1315 aa		7.72	□□□□□ -1.17
RDM1-223	ENST00000619193	ANKRD36B	Q8N2N9	1353 aa		7.71	□□□□□ -1.17
RDM1-223	ENST00000619193	TMEM131L	A2VDJ0	1609 aa		7.71	□□□□□ -1.17
RDM1-223	ENST00000619193	RLBP1	P12271	317 aa		7.71	□□□□□ -1.18
RDM1-223	ENST00000619193	RARS	P54136	660 aa	Known RBP	7.71	□□□□□ -1.18
RDM1-223	ENST00000619193	RBM6	P78332	1123 aa	Known RBP	7.71	□□□□□ -1.18
RDM1-223	ENST00000619193	NFKBIB	Q15653	356 aa		7.71	□□□□□ -1.18
RDM1-223	ENST00000619193	PROM2	Q8N271	834 aa		7.71	□□□□□ -1.18
RDM1-223	ENST00000619193	CGNL1	Q0VF96	1302 aa		7.71	□□□□□ -1.18
RDM1-223	ENST00000619193	MYO5B	Q9ULV0	1848 aa		7.71	□□□□□ -1.18
RDM1-223	ENST00000619193	NSD2	O96028	1365 aa		7.71	□□□□□ -1.18
RDM1-223	ENST00000619193	SEC24B	O95487	1268 aa		7.7	□□□□□ -1.18
RDM1-223	ENST00000619193	NEFM	P07197	916 aa		7.7	□□□□□ -1.18
RDM1-223	ENST00000619193	SLC4A3	P48751	1232 aa		7.7	□□□□□ -1.18
RDM1-223	ENST00000619193	DEFB132	Q7Z7B7	95 aa		7.7	□□□□□ -1.18
RDM1-223	ENST00000619193	THEMIS	Q8N1K5	641 aa	Predicted RBP	7.7	□□□□□ -1.18
RDM1-223	ENST00000619193	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	7.7	□□□□□ -1.18
RDM1-223	ENST00000619193	PANK1	Q8TE04	598 aa		7.7	□□□□□ -1.18
RDM1-223	ENST00000619193	RUNDC1	Q96C34	613 aa		7.7	□□□□□ -1.18
RDM1-223	ENST00000619193	SLC12A5	Q9H2X9	1139 aa		7.7	□□□□□ -1.18
RDM1-223	ENST00000619193	QTRT2	Q9H974	415 aa	Known RBP	7.7	□□□□□ -1.18
RDM1-223	ENST00000619193	CLEC11A	Q9Y240	323 aa		7.7	□□□□□ -1.18
RDM1-223	ENST00000619193	PCDHB15	Q9Y5E8	787 aa		7.7	□□□□□ -1.18
RDM1-223	ENST00000619193	NWD1	Q149M9	1564 aa		7.7	□□□□□ -1.18
RDM1-223	ENST00000619193	AHDC1	Q5TGY3	1603 aa	Predicted RBP	7.7	□□□□□ -1.18
RDM1-223	ENST00000619193	ABCC11	Q96J66	1382 aa		7.7	□□□□□ -1.18
RDM1-223	ENST00000619193	FXR2	P51116	673 aa	Known RBP eCLIP	7.69	□□□□□ -1.18
RDM1-223	ENST00000619193	WDR63	Q8IWG1	891 aa		7.69	□□□□□ -1.18
RDM1-223	ENST00000619193	PIP4P2	Q8N4L2	257 aa		7.69	□□□□□ -1.18
RDM1-223	ENST00000619193	IL27	Q8NEV9	243 aa		7.69	□□□□□ -1.18
RDM1-223	ENST00000619193	CLUAP1	Q96AJ1	413 aa		7.69	□□□□□ -1.18
RDM1-223	ENST00000619193	RTL5	Q5HYW3	569 aa	Predicted RBP	7.68	□□□□□ -1.18
RDM1-223	ENST00000619193	TCP11L2	Q8N4U5	519 aa		7.68	□□□□□ -1.18
RDM1-223	ENST00000619193	C8orf37	Q96NL8	207 aa		7.68	□□□□□ -1.18
RDM1-223	ENST00000619193	PLEKHF1	Q96S99	279 aa		7.68	□□□□□ -1.18
RDM1-223	ENST00000619193	ANTXR1	Q9H6X2	564 aa		7.68	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms