RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 PMFBP1Q8TBY8 1022 aa17.24■□□□□ 0.35
CNTNAP3B-215ENST00000619138 SIGLEC1Q9BZZ2 1709 aa17.23■□□□□ 0.35
CNTNAP3B-215ENST00000619138 CLCN1P35523 988 aa17.23■□□□□ 0.35
CNTNAP3B-215ENST00000619138 RIMS2Q9UQ26 1411 aa17.22■□□□□ 0.35
CNTNAP3B-215ENST00000619138 FOXD4L5Q5VV16 416 aaPredicted RBP17.22■□□□□ 0.35
CNTNAP3B-215ENST00000619138 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.22■□□□□ 0.35
CNTNAP3B-215ENST00000619138 FOXD4L4Q8WXT5 416 aaPredicted RBP17.22■□□□□ 0.35
CNTNAP3B-215ENST00000619138 ADGRB3O60242 1522 aa17.22■□□□□ 0.35
CNTNAP3B-215ENST00000619138 TBC1D32Q96NH3 1257 aa17.22■□□□□ 0.35
CNTNAP3B-215ENST00000619138 EVC2Q86UK5 1308 aa17.21■□□□□ 0.35
CNTNAP3B-215ENST00000619138 MSNP26038 577 aaKnown RBP17.21■□□□□ 0.35
CNTNAP3B-215ENST00000619138 KIAA1211Q6ZU35 1233 aa17.21■□□□□ 0.35
CNTNAP3B-215ENST00000619138 RRP9O43818 475 aaKnown RBP17.21■□□□□ 0.35
CNTNAP3B-215ENST00000619138 LNPKQ9C0E8 428 aa17.21■□□□□ 0.35
CNTNAP3B-215ENST00000619138 AGLP35573 1532 aa17.21■□□□□ 0.34
CNTNAP3B-215ENST00000619138 MPNDQ8N594 471 aa17.2■□□□□ 0.34
CNTNAP3B-215ENST00000619138 MYOM2P54296 1465 aa17.2■□□□□ 0.34
CNTNAP3B-215ENST00000619138 ERBB4Q15303 1308 aa17.2■□□□□ 0.34
CNTNAP3B-215ENST00000619138 PIK3C2GO75747 1445 aa17.19■□□□□ 0.34
CNTNAP3B-215ENST00000619138 U2SURPO15042 1029 aaKnown RBP17.19■□□□□ 0.34
CNTNAP3B-215ENST00000619138 R3HCC1Q9Y3T6 440 aaKnown RBP17.19■□□□□ 0.34
CNTNAP3B-215ENST00000619138 DNTTIP2Q5QJE6 756 aaKnown RBP17.18■□□□□ 0.34
CNTNAP3B-215ENST00000619138 MORC1Q86VD1 984 aa17.18■□□□□ 0.34
CNTNAP3B-215ENST00000619138 TSR2Q969E8 191 aaKnown RBP17.18■□□□□ 0.34
CNTNAP3B-215ENST00000619138 ANTXR1Q9H6X2 564 aa17.18■□□□□ 0.34
CNTNAP3B-215ENST00000619138 SMC4Q9NTJ3 1288 aa17.18■□□□□ 0.34
CNTNAP3B-215ENST00000619138 PREX1Q8TCU6 1659 aa17.18■□□□□ 0.34
CNTNAP3B-215ENST00000619138 U2AF1L5P0DN76 240 aaPredicted RBP17.17■□□□□ 0.34
CNTNAP3B-215ENST00000619138 U2AF1Q01081 240 aaKnown RBP eCLIP17.17■□□□□ 0.34
CNTNAP3B-215ENST00000619138 DDX49Q9Y6V7 483 aaKnown RBP17.17■□□□□ 0.34
CNTNAP3B-215ENST00000619138 WWC1Q8IX03 1113 aa17.16■□□□□ 0.34
CNTNAP3B-215ENST00000619138 PODXL2Q9NZ53 605 aa17.16■□□□□ 0.34
CNTNAP3B-215ENST00000619138 DDX11L8A8MPP1 907 aa17.16■□□□□ 0.34
CNTNAP3B-215ENST00000619138 ZC3H13Q5T200 1668 aaKnown RBP17.16■□□□□ 0.34
CNTNAP3B-215ENST00000619138 GAS2L3Q86XJ1 694 aa17.16■□□□□ 0.34
CNTNAP3B-215ENST00000619138 TCP11L2Q8N4U5 519 aa17.16■□□□□ 0.34
CNTNAP3B-215ENST00000619138 APBB1O00213 710 aa17.15■□□□□ 0.34
CNTNAP3B-215ENST00000619138 LTKP29376 864 aa17.15■□□□□ 0.34
CNTNAP3B-215ENST00000619138 PDE3AQ14432 1141 aa17.15■□□□□ 0.34
CNTNAP3B-215ENST00000619138 THEMISQ8N1K5 641 aaPredicted RBP17.15■□□□□ 0.34
CNTNAP3B-215ENST00000619138 GBP4Q96PP9 640 aa17.15■□□□□ 0.34
CNTNAP3B-215ENST00000619138 PIK3C2BO00750 1634 aa17.14■□□□□ 0.33
CNTNAP3B-215ENST00000619138 FOXD4L6Q3SYB3 417 aaPredicted RBP17.14■□□□□ 0.33
CNTNAP3B-215ENST00000619138 FOXD4L3Q6VB84 417 aaPredicted RBP17.14■□□□□ 0.33
CNTNAP3B-215ENST00000619138 CDK19Q9BWU1 502 aa17.14■□□□□ 0.33
CNTNAP3B-215ENST00000619138 TNPO1Q92973 898 aaKnown RBP17.14■□□□□ 0.33
CNTNAP3B-215ENST00000619138 PRDM10Q9NQV6 1147 aa17.14■□□□□ 0.33
CNTNAP3B-215ENST00000619138 GOLGA6L22H0YM25 854 aa17.13■□□□□ 0.33
CNTNAP3B-215ENST00000619138 PLCB2Q00722 1185 aa17.13■□□□□ 0.33
CNTNAP3B-215ENST00000619138 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.13■□□□□ 0.33
CNTNAP3B-215ENST00000619138 A2ML1A8K2U0 1454 aa17.13■□□□□ 0.33
CNTNAP3B-215ENST00000619138 RARSP54136 660 aaKnown RBP17.13■□□□□ 0.33
CNTNAP3B-215ENST00000619138 NKTRP30414 1462 aaKnown RBP17.12■□□□□ 0.33
CNTNAP3B-215ENST00000619138 MYO5BQ9ULV0 1848 aa17.12■□□□□ 0.33
CNTNAP3B-215ENST00000619138 BLMP54132 1417 aaPredicted RBP17.12■□□□□ 0.33
CNTNAP3B-215ENST00000619138 NASPP49321 788 aaPredicted RBP17.12■□□□□ 0.33
CNTNAP3B-215ENST00000619138 RBM33Q96EV2 1170 aaKnown RBP17.12■□□□□ 0.33
CNTNAP3B-215ENST00000619138 RBM42Q9BTD8 480 aaKnown RBP17.12■□□□□ 0.33
CNTNAP3B-215ENST00000619138 NEXMIFQ5QGS0 1516 aa17.12■□□□□ 0.33
CNTNAP3B-215ENST00000619138 C14orf37Q86TY3 774 aa17.11■□□□□ 0.33
CNTNAP3B-215ENST00000619138 YTHDC2Q9H6S0 1430 aaKnown RBP17.1■□□□□ 0.33
CNTNAP3B-215ENST00000619138 ELL2O00472 640 aaPredicted RBP17.1■□□□□ 0.33
CNTNAP3B-215ENST00000619138 C1orf115Q9H7X2 142 aa17.1■□□□□ 0.33
CNTNAP3B-215ENST00000619138 CABP1Q9NZU7 370 aa17.1■□□□□ 0.33
CNTNAP3B-215ENST00000619138 PTMAP06454 111 aaKnown RBP17.1■□□□□ 0.33
CNTNAP3B-215ENST00000619138 DZIP1LQ8IYY4 767 aaKnown RBP17.1■□□□□ 0.33
CNTNAP3B-215ENST00000619138 CARD14Q9BXL6 1004 aa17.1■□□□□ 0.33
CNTNAP3B-215ENST00000619138 SOX12O15370 315 aa17.09■□□□□ 0.33
CNTNAP3B-215ENST00000619138 FSD2A1L4K1 749 aa17.09■□□□□ 0.33
CNTNAP3B-215ENST00000619138 XPCQ01831 940 aaPredicted RBP17.09■□□□□ 0.33
CNTNAP3B-215ENST00000619138 REREQ9P2R6 1566 aa17.09■□□□□ 0.33
CNTNAP3B-215ENST00000619138 ANKRD45Q5TZF3 282 aa17.09■□□□□ 0.33
CNTNAP3B-215ENST00000619138 TMEM2Q9UHN6 1383 aa17.09■□□□□ 0.33
CNTNAP3B-215ENST00000619138 PPLO60437 1756 aa17.09■□□□□ 0.33
CNTNAP3B-215ENST00000619138 SSFA2P28290 1259 aa17.08■□□□□ 0.33
CNTNAP3B-215ENST00000619138 ZKSCAN2Q63HK3 967 aa17.08■□□□□ 0.33
CNTNAP3B-215ENST00000619138 MCTP1Q6DN14 999 aa17.08■□□□□ 0.33
CNTNAP3B-215ENST00000619138 GGNBP2Q9H3C7 697 aa17.08■□□□□ 0.33
CNTNAP3B-215ENST00000619138 CAVIN1Q6NZI2 390 aaKnown RBP17.08■□□□□ 0.32
CNTNAP3B-215ENST00000619138 RNF214Q8ND24 703 aa17.08■□□□□ 0.32
CNTNAP3B-215ENST00000619138 METP08581 1390 aa17.07■□□□□ 0.32
CNTNAP3B-215ENST00000619138 HDGFL2Q7Z4V5 671 aaPredicted RBP17.07■□□□□ 0.32
CNTNAP3B-215ENST00000619138 TMEM131LA2VDJ0 1609 aa17.07■□□□□ 0.32
CNTNAP3B-215ENST00000619138 NOL8Q76FK4 1167 aaKnown RBP17.07■□□□□ 0.32
CNTNAP3B-215ENST00000619138 TERF2IPQ9NYB0 399 aa17.07■□□□□ 0.32
CNTNAP3B-215ENST00000619138 ZNF521Q96K83 1311 aa17.06■□□□□ 0.32
CNTNAP3B-215ENST00000619138 NCKAP5LQ9HCH0 1330 aa17.06■□□□□ 0.32
CNTNAP3B-215ENST00000619138 NSD3Q9BZ95 1437 aa17.06■□□□□ 0.32
CNTNAP3B-215ENST00000619138 NRXN1Q9ULB1 1477 aa17.05■□□□□ 0.32
CNTNAP3B-215ENST00000619138 EXOSC9Q06265 439 aaKnown RBP17.05■□□□□ 0.32
CNTNAP3B-215ENST00000619138 BCL11BQ9C0K0 894 aaPredicted RBP17.05■□□□□ 0.32
CNTNAP3B-215ENST00000619138 AMOTL2Q9Y2J4 779 aa17.05■□□□□ 0.32
CNTNAP3B-215ENST00000619138 MTHFSP49914 203 aa17.04■□□□□ 0.32
CNTNAP3B-215ENST00000619138 IQGAP1P46940 1657 aa17.04■□□□□ 0.32
CNTNAP3B-215ENST00000619138 SPATA31D1Q6ZQQ2 1576 aa17.04■□□□□ 0.32
CNTNAP3B-215ENST00000619138 CALD1Q05682 793 aaKnown RBP17.03■□□□□ 0.32
CNTNAP3B-215ENST00000619138 LAMC1P11047 1609 aa17.03■□□□□ 0.32
CNTNAP3B-215ENST00000619138 MVPQ14764 893 aaKnown RBP17.03■□□□□ 0.32
CNTNAP3B-215ENST00000619138 ANKLE2Q86XL3 938 aa17.03■□□□□ 0.32
CNTNAP3B-215ENST00000619138 POLR1AO95602 1720 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms