RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 MARF1Q9Y4F3 1742 aaKnown RBP11.02□□□□□ -0.65
TARDBP-219ENST00000617757 NHSL1Q5SYE7 1610 aa11.02□□□□□ -0.65
TARDBP-219ENST00000617757 CNGB1Q14028 1251 aaPredicted RBP11.01□□□□□ -0.65
TARDBP-219ENST00000617757 CC2D1BQ5T0F9 858 aaKnown RBP11.01□□□□□ -0.65
TARDBP-219ENST00000617757 SLAIN2Q9P270 581 aa11.01□□□□□ -0.65
TARDBP-219ENST00000617757 CGNL1Q0VF96 1302 aa11.01□□□□□ -0.65
TARDBP-219ENST00000617757 ROBO1Q9Y6N7 1651 aa11.01□□□□□ -0.65
TARDBP-219ENST00000617757 PARD3Q8TEW0 1356 aa11.01□□□□□ -0.65
TARDBP-219ENST00000617757 IQSEC2Q5JU85 1478 aa11□□□□□ -0.65
TARDBP-219ENST00000617757 MAP2P11137 1827 aaKnown RBP11□□□□□ -0.65
TARDBP-219ENST00000617757 ALS2Q96Q42 1657 aa11□□□□□ -0.65
TARDBP-219ENST00000617757 TTC21BQ7Z4L5 1316 aa11□□□□□ -0.65
TARDBP-219ENST00000617757 NSD2O96028 1365 aa11□□□□□ -0.65
TARDBP-219ENST00000617757 FYB1O15117 783 aa10.99□□□□□ -0.65
TARDBP-219ENST00000617757 RALBP1Q15311 655 aa10.99□□□□□ -0.65
TARDBP-219ENST00000617757 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.99□□□□□ -0.65
TARDBP-219ENST00000617757 BRD4O60885 1362 aaPredicted RBP10.99□□□□□ -0.65
TARDBP-219ENST00000617757 FOXO3O43524 673 aa10.98□□□□□ -0.65
TARDBP-219ENST00000617757 PSME1Q06323 249 aa10.98□□□□□ -0.65
TARDBP-219ENST00000617757 PPP4R3CPQ6ZMV5 832 aa10.98□□□□□ -0.65
TARDBP-219ENST00000617757 BRINP3Q76B58 766 aa10.98□□□□□ -0.65
TARDBP-219ENST00000617757 TTC21AQ8NDW8 1320 aa10.98□□□□□ -0.65
TARDBP-219ENST00000617757 NME9Q86XW9 330 aa10.97□□□□□ -0.65
TARDBP-219ENST00000617757 GGNBP2Q9H3C7 697 aa10.97□□□□□ -0.65
TARDBP-219ENST00000617757 PXDNQ92626 1479 aa10.96□□□□□ -0.65
TARDBP-219ENST00000617757 MYBBP1AQ9BQG0 1328 aaKnown RBP10.96□□□□□ -0.65
TARDBP-219ENST00000617757 KRT28Q7Z3Y7 464 aa10.96□□□□□ -0.65
TARDBP-219ENST00000617757 MORC1Q86VD1 984 aa10.96□□□□□ -0.65
TARDBP-219ENST00000617757 OVOS2A0A0J9YW53 1432 aa10.95□□□□□ -0.66
TARDBP-219ENST00000617757 OVOS2Q6IE36 1432 aa10.95□□□□□ -0.66
TARDBP-219ENST00000617757 NPHP3Q7Z494 1330 aa10.95□□□□□ -0.66
TARDBP-219ENST00000617757 CCER2I3L3R5 266 aa10.95□□□□□ -0.66
TARDBP-219ENST00000617757 DDX17Q92841 729 aaKnown RBP10.95□□□□□ -0.66
TARDBP-219ENST00000617757 ZRANB1Q9UGI0 708 aa10.95□□□□□ -0.66
TARDBP-219ENST00000617757 CRYBG1Q9Y4K1 1723 aa10.95□□□□□ -0.66
TARDBP-219ENST00000617757 AHDC1Q5TGY3 1603 aaPredicted RBP10.95□□□□□ -0.66
TARDBP-219ENST00000617757 USP31Q70CQ4 1352 aa10.94□□□□□ -0.66
TARDBP-219ENST00000617757 TOM1O60784 492 aa10.94□□□□□ -0.66
TARDBP-219ENST00000617757 PAK3O75914 559 aaPredicted RBP10.94□□□□□ -0.66
TARDBP-219ENST00000617757 PPP2R1AP30153 589 aa10.94□□□□□ -0.66
TARDBP-219ENST00000617757 XPCQ01831 940 aaPredicted RBP10.94□□□□□ -0.66
TARDBP-219ENST00000617757 CERKQ8TCT0 537 aa10.94□□□□□ -0.66
TARDBP-219ENST00000617757 LTN1O94822 1766 aa10.94□□□□□ -0.66
TARDBP-219ENST00000617757 PHLPP1O60346 1717 aa10.94□□□□□ -0.66
TARDBP-219ENST00000617757 SBNO1A3KN83 1393 aa10.93□□□□□ -0.66
TARDBP-219ENST00000617757 ABTB2Q8N961 1025 aa10.93□□□□□ -0.66
TARDBP-219ENST00000617757 COG3Q96JB2 828 aa10.93□□□□□ -0.66
TARDBP-219ENST00000617757 PHRF1Q9P1Y6 1649 aaKnown RBP10.93□□□□□ -0.66
TARDBP-219ENST00000617757 SOS2Q07890 1332 aaPredicted RBP10.92□□□□□ -0.66
TARDBP-219ENST00000617757 TNNT2P45379 298 aaPredicted RBP10.92□□□□□ -0.66
TARDBP-219ENST00000617757 CCDC184Q52MB2 194 aa10.92□□□□□ -0.66
TARDBP-219ENST00000617757 ABCA3Q99758 1704 aa10.92□□□□□ -0.66
TARDBP-219ENST00000617757 TNS3Q68CZ2 1445 aa10.92□□□□□ -0.66
TARDBP-219ENST00000617757 SLIT3O75094 1523 aa10.91□□□□□ -0.66
TARDBP-219ENST00000617757 UBAP1LF5GYI3 381 aa10.91□□□□□ -0.66
TARDBP-219ENST00000617757 NLRP6P59044 892 aa10.91□□□□□ -0.66
TARDBP-219ENST00000617757 NLRP13Q86W25 1043 aa10.91□□□□□ -0.66
TARDBP-219ENST00000617757 COL16A1Q07092 1604 aaPredicted RBP10.91□□□□□ -0.66
TARDBP-219ENST00000617757 MED1Q15648 1581 aaPredicted RBP10.9□□□□□ -0.66
TARDBP-219ENST00000617757 SPATA31A3Q5VYP0 1347 aa10.9□□□□□ -0.66
TARDBP-219ENST00000617757 PEAK1Q9H792 1746 aa10.9□□□□□ -0.66
TARDBP-219ENST00000617757 SHPRHQ149N8 1683 aa10.9□□□□□ -0.66
TARDBP-219ENST00000617757 NUTM2GQ5VZR2 741 aa10.9□□□□□ -0.66
TARDBP-219ENST00000617757 AATKQ6ZMQ8 1374 aa10.9□□□□□ -0.67
TARDBP-219ENST00000617757 FBLN1P23142 703 aa10.89□□□□□ -0.67
TARDBP-219ENST00000617757 LMOD2Q6P5Q4 547 aa10.89□□□□□ -0.67
TARDBP-219ENST00000617757 ILDR1Q86SU0 546 aaPredicted RBP10.89□□□□□ -0.67
TARDBP-219ENST00000617757 NFAT5O94916 1531 aa10.89□□□□□ -0.67
TARDBP-219ENST00000617757 COL22A1Q8NFW1 1626 aaPredicted RBP10.88□□□□□ -0.67
TARDBP-219ENST00000617757 RGPD5Q99666 1765 aa10.88□□□□□ -0.67
TARDBP-219ENST00000617757 PIP4K2BP78356 416 aa10.88□□□□□ -0.67
TARDBP-219ENST00000617757 SMG6Q86US8 1419 aaKnown RBP10.88□□□□□ -0.67
TARDBP-219ENST00000617757 MRS2Q9HD23 443 aa10.88□□□□□ -0.67
TARDBP-219ENST00000617757 ARHGEF10O15013 1369 aa10.88□□□□□ -0.67
TARDBP-219ENST00000617757 USP19O94966 1318 aa10.87□□□□□ -0.67
TARDBP-219ENST00000617757 MTHFSP49914 203 aa10.87□□□□□ -0.67
TARDBP-219ENST00000617757 POLKQ9UBT6 870 aa10.87□□□□□ -0.67
TARDBP-219ENST00000617757 COL3A1P02461 1466 aaPredicted RBP10.86□□□□□ -0.67
TARDBP-219ENST00000617757 COL18A1P39060 1754 aa10.85□□□□□ -0.67
TARDBP-219ENST00000617757 SOX12O15370 315 aa10.85□□□□□ -0.67
TARDBP-219ENST00000617757 RRS1Q15050 365 aaKnown RBP10.85□□□□□ -0.67
TARDBP-219ENST00000617757 KCNH5Q8NCM2 988 aa10.85□□□□□ -0.67
TARDBP-219ENST00000617757 LRRC59Q96AG4 307 aaKnown RBP10.85□□□□□ -0.67
TARDBP-219ENST00000617757 EMILIN1Q9Y6C2 1016 aa10.85□□□□□ -0.67
TARDBP-219ENST00000617757 CDK12Q9NYV4 1490 aaPredicted RBP10.85□□□□□ -0.67
TARDBP-219ENST00000617757 GCP02774 474 aa10.84□□□□□ -0.67
TARDBP-219ENST00000617757 PNISRQ8TF01 805 aaKnown RBP10.84□□□□□ -0.67
TARDBP-219ENST00000617757 CFAP53Q96M91 514 aa10.84□□□□□ -0.67
TARDBP-219ENST00000617757 INSRP06213 1382 aa10.84□□□□□ -0.67
TARDBP-219ENST00000617757 PNPLA6Q8IY17 1366 aa10.84□□□□□ -0.67
TARDBP-219ENST00000617757 RGPD2P0DJD1 1756 aa10.83□□□□□ -0.68
TARDBP-219ENST00000617757 PLEKHG5O94827 1062 aa10.83□□□□□ -0.68
TARDBP-219ENST00000617757 CABLES1Q8TDN4 633 aa10.83□□□□□ -0.68
TARDBP-219ENST00000617757 MAP3K19Q56UN5 1328 aa10.83□□□□□ -0.68
TARDBP-219ENST00000617757 KIF24Q5T7B8 1368 aa10.82□□□□□ -0.68
TARDBP-219ENST00000617757 RGPD1P0DJD0 1748 aa10.82□□□□□ -0.68
TARDBP-219ENST00000617757 PPM1GO15355 546 aaPredicted RBP10.82□□□□□ -0.68
TARDBP-219ENST00000617757 HOXD11P31277 338 aaPredicted RBP10.82□□□□□ -0.68
TARDBP-219ENST00000617757 FAM9BQ8IZU0 186 aa10.82□□□□□ -0.68
TARDBP-219ENST00000617757 FLT4P35916 1363 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms