RNA–Protein interactions for RNA: ENST00000617558.2

AL662899.3-202, humanhuman

TSL 1 (best) BASIC

Gene AL662899.3, Length 991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL662899.3-202ENST00000617558 HDGFL2Q7Z4V5 671 aaPredicted RBP16.12■□□□□ 0.17
AL662899.3-202ENST00000617558 NGDNQ8NEJ9 315 aaKnown RBP16.12■□□□□ 0.17
AL662899.3-202ENST00000617558 TTC21AQ8NDW8 1320 aa16.12■□□□□ 0.17
AL662899.3-202ENST00000617558 KIF20BQ96Q89 1820 aa16.12■□□□□ 0.17
AL662899.3-202ENST00000617558 ANKRD26Q9UPS8 1709 aa16.11■□□□□ 0.17
AL662899.3-202ENST00000617558 TMC1Q8TDI8 760 aa16.11■□□□□ 0.17
AL662899.3-202ENST00000617558 NPC1L1Q9UHC9 1359 aa16.11■□□□□ 0.17
AL662899.3-202ENST00000617558 PIP4K2BP78356 416 aa16.1■□□□□ 0.17
AL662899.3-202ENST00000617558 ARHGEF10O15013 1369 aa16.1■□□□□ 0.17
AL662899.3-202ENST00000617558 ABCA3Q99758 1704 aa16.09■□□□□ 0.17
AL662899.3-202ENST00000617558 PSME1Q06323 249 aa16.09■□□□□ 0.17
AL662899.3-202ENST00000617558 CARD14Q9BXL6 1004 aa16.09■□□□□ 0.17
AL662899.3-202ENST00000617558 SPATA31A3Q5VYP0 1347 aa16.09■□□□□ 0.17
AL662899.3-202ENST00000617558 NSD2O96028 1365 aa16.09■□□□□ 0.17
AL662899.3-202ENST00000617558 USP31Q70CQ4 1352 aa16.09■□□□□ 0.17
AL662899.3-202ENST00000617558 NSD3Q9BZ95 1437 aa16.09■□□□□ 0.17
AL662899.3-202ENST00000617558 PER1O15534 1290 aaPredicted RBP16.08■□□□□ 0.16
AL662899.3-202ENST00000617558 KRT28Q7Z3Y7 464 aa16.08■□□□□ 0.16
AL662899.3-202ENST00000617558 TTC21BQ7Z4L5 1316 aa16.08■□□□□ 0.16
AL662899.3-202ENST00000617558 OVOS2A0A0J9YW53 1432 aa16.08■□□□□ 0.16
AL662899.3-202ENST00000617558 OVOS2Q6IE36 1432 aa16.08■□□□□ 0.16
AL662899.3-202ENST00000617558 PANK3Q9H999 370 aa16.07■□□□□ 0.16
AL662899.3-202ENST00000617558 SLIT3O75094 1523 aa16.07■□□□□ 0.16
AL662899.3-202ENST00000617558 PNPLA6Q8IY17 1366 aa16.06■□□□□ 0.16
AL662899.3-202ENST00000617558 USP19O94966 1318 aa16.06■□□□□ 0.16
AL662899.3-202ENST00000617558 DDX17Q92841 729 aaKnown RBP16.06■□□□□ 0.16
AL662899.3-202ENST00000617558 LRRC59Q96AG4 307 aaKnown RBP16.06■□□□□ 0.16
AL662899.3-202ENST00000617558 PHRF1Q9P1Y6 1649 aaKnown RBP16.05■□□□□ 0.16
AL662899.3-202ENST00000617558 CGNL1Q0VF96 1302 aa16.05■□□□□ 0.16
AL662899.3-202ENST00000617558 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
AL662899.3-202ENST00000617558 POLR3GLQ9BT43 218 aa16.04■□□□□ 0.16
AL662899.3-202ENST00000617558 JCADQ9P266 1359 aa16.03■□□□□ 0.16
AL662899.3-202ENST00000617558 AMER1Q5JTC6 1135 aaPredicted RBP16.03■□□□□ 0.16
AL662899.3-202ENST00000617558 HSPA1LP34931 641 aa16.02■□□□□ 0.16
AL662899.3-202ENST00000617558 XPCQ01831 940 aaPredicted RBP16.02■□□□□ 0.16
AL662899.3-202ENST00000617558 NFAT5O94916 1531 aa16.02■□□□□ 0.15
AL662899.3-202ENST00000617558 FYB1O15117 783 aa16.01■□□□□ 0.15
AL662899.3-202ENST00000617558 KNSTRNQ9Y448 316 aa16.01■□□□□ 0.15
AL662899.3-202ENST00000617558 ABCC6O95255 1503 aa16■□□□□ 0.15
AL662899.3-202ENST00000617558 SPATA31A6Q5VVP1 1343 aa15.98■□□□□ 0.15
AL662899.3-202ENST00000617558 DDX10Q13206 875 aaKnown RBP15.98■□□□□ 0.15
AL662899.3-202ENST00000617558 NLRP13Q86W25 1043 aa15.98■□□□□ 0.15
AL662899.3-202ENST00000617558 NME9Q86XW9 330 aa15.98■□□□□ 0.15
AL662899.3-202ENST00000617558 ABTB2Q8N961 1025 aa15.98■□□□□ 0.15
AL662899.3-202ENST00000617558 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.97■□□□□ 0.15
AL662899.3-202ENST00000617558 CPDO75976 1380 aa15.97■□□□□ 0.15
AL662899.3-202ENST00000617558 AATKQ6ZMQ8 1374 aa15.97■□□□□ 0.15
AL662899.3-202ENST00000617558 SMG6Q86US8 1419 aaKnown RBP15.96■□□□□ 0.15
AL662899.3-202ENST00000617558 PAK3O75914 559 aaPredicted RBP15.96■□□□□ 0.15
AL662899.3-202ENST00000617558 PARD3Q8TEW0 1356 aa15.96■□□□□ 0.15
AL662899.3-202ENST00000617558 NLRP6P59044 892 aa15.95■□□□□ 0.14
AL662899.3-202ENST00000617558 COG3Q96JB2 828 aa15.94■□□□□ 0.14
AL662899.3-202ENST00000617558 KIF24Q5T7B8 1368 aa15.94■□□□□ 0.14
AL662899.3-202ENST00000617558 LTN1O94822 1766 aa15.93■□□□□ 0.14
AL662899.3-202ENST00000617558 LMO7Q8WWI1 1683 aa15.93■□□□□ 0.14
AL662899.3-202ENST00000617558 KCNH5Q8NCM2 988 aa15.93■□□□□ 0.14
AL662899.3-202ENST00000617558 COL18A1P39060 1754 aa15.92■□□□□ 0.14
AL662899.3-202ENST00000617558 GGNBP2Q9H3C7 697 aa15.92■□□□□ 0.14
AL662899.3-202ENST00000617558 LRP6O75581 1613 aa15.92■□□□□ 0.14
AL662899.3-202ENST00000617558 MAP2P11137 1827 aaKnown RBP15.91■□□□□ 0.14
AL662899.3-202ENST00000617558 RTL1A6NKG5 1358 aa15.91■□□□□ 0.14
AL662899.3-202ENST00000617558 COL14A1Q05707 1796 aaKnown RBP15.91■□□□□ 0.14
AL662899.3-202ENST00000617558 GCP02774 474 aa15.91■□□□□ 0.14
AL662899.3-202ENST00000617558 ZRANB1Q9UGI0 708 aa15.91■□□□□ 0.14
AL662899.3-202ENST00000617558 NWD2Q9ULI1 1742 aa15.91■□□□□ 0.14
AL662899.3-202ENST00000617558 LMOD2Q6P5Q4 547 aa15.89■□□□□ 0.13
AL662899.3-202ENST00000617558 CDK12Q9NYV4 1490 aaPredicted RBP15.89■□□□□ 0.13
AL662899.3-202ENST00000617558 PLCH1Q4KWH8 1693 aa15.89■□□□□ 0.13
AL662899.3-202ENST00000617558 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.88■□□□□ 0.13
AL662899.3-202ENST00000617558 PEAK1Q9H792 1746 aa15.88■□□□□ 0.13
AL662899.3-202ENST00000617558 NUTM2GQ5VZR2 741 aa15.88■□□□□ 0.13
AL662899.3-202ENST00000617558 ARHGEF25Q86VW2 580 aa15.88■□□□□ 0.13
AL662899.3-202ENST00000617558 RALBP1Q15311 655 aa15.87■□□□□ 0.13
AL662899.3-202ENST00000617558 INSRP06213 1382 aa15.87■□□□□ 0.13
AL662899.3-202ENST00000617558 SLIT2O94813 1529 aa15.86■□□□□ 0.13
AL662899.3-202ENST00000617558 MORC1Q86VD1 984 aa15.86■□□□□ 0.13
AL662899.3-202ENST00000617558 CABLES1Q8TDN4 633 aa15.86■□□□□ 0.13
AL662899.3-202ENST00000617558 KIAA0232Q92628 1395 aa15.86■□□□□ 0.13
AL662899.3-202ENST00000617558 FAM208AQ9UK61 1670 aaKnown RBP15.86■□□□□ 0.13
AL662899.3-202ENST00000617558 BLMP54132 1417 aaPredicted RBP15.85■□□□□ 0.13
AL662899.3-202ENST00000617558 NRAPQ86VF7 1730 aa15.85■□□□□ 0.13
AL662899.3-202ENST00000617558 CC2D1BQ5T0F9 858 aaKnown RBP15.85■□□□□ 0.13
AL662899.3-202ENST00000617558 PRKRIP1Q9H875 184 aaPredicted RBP15.85■□□□□ 0.13
AL662899.3-202ENST00000617558 ILDR1Q86SU0 546 aaPredicted RBP15.84■□□□□ 0.13
AL662899.3-202ENST00000617558 MAP3K19Q56UN5 1328 aa15.84■□□□□ 0.13
AL662899.3-202ENST00000617558 FLT4P35916 1363 aa15.84■□□□□ 0.13
AL662899.3-202ENST00000617558 CAMTA1Q9Y6Y1 1673 aa15.83■□□□□ 0.13
AL662899.3-202ENST00000617558 COL3A1P02461 1466 aaPredicted RBP15.83■□□□□ 0.12
AL662899.3-202ENST00000617558 POLKQ9UBT6 870 aa15.82■□□□□ 0.12
AL662899.3-202ENST00000617558 RGPD5Q99666 1765 aa15.82■□□□□ 0.12
AL662899.3-202ENST00000617558 COL5A2P05997 1499 aaPredicted RBP15.81■□□□□ 0.12
AL662899.3-202ENST00000617558 PRDM11Q9NQV5 511 aa15.81■□□□□ 0.12
AL662899.3-202ENST00000617558 MYBBP1AQ9BQG0 1328 aaKnown RBP15.8■□□□□ 0.12
AL662899.3-202ENST00000617558 HAP1P54257 671 aaPredicted RBP15.8■□□□□ 0.12
AL662899.3-202ENST00000617558 FNBP4Q8N3X1 1017 aaPredicted RBP15.8■□□□□ 0.12
AL662899.3-202ENST00000617558 IP6K1Q92551 441 aa15.8■□□□□ 0.12
AL662899.3-202ENST00000617558 RGPD1P0DJD0 1748 aa15.8■□□□□ 0.12
AL662899.3-202ENST00000617558 NCAPD2Q15021 1401 aa15.79■□□□□ 0.12
AL662899.3-202ENST00000617558 FAM83GA6ND36 823 aa15.79■□□□□ 0.12
AL662899.3-202ENST00000617558 PPP2R1AP30153 589 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms