RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 HNRNPUQ00839 825 aaKnown RBP eCLIP27.74■■■□□ 2.03
SDHA-220ENST00000617470 CARD14Q9BXL6 1004 aa27.73■■■□□ 2.03
SDHA-220ENST00000617470 ROBO1Q9Y6N7 1651 aa27.73■■■□□ 2.03
SDHA-220ENST00000617470 NPHP3Q7Z494 1330 aa27.71■■■□□ 2.03
SDHA-220ENST00000617470 NSD3Q9BZ95 1437 aa27.7■■■□□ 2.03
SDHA-220ENST00000617470 PAK3O75914 559 aaPredicted RBP27.7■■■□□ 2.03
SDHA-220ENST00000617470 KRT28Q7Z3Y7 464 aa27.7■■■□□ 2.03
SDHA-220ENST00000617470 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.7■■■□□ 2.03
SDHA-220ENST00000617470 KNSTRNQ9Y448 316 aa27.7■■■□□ 2.03
SDHA-220ENST00000617470 USP6P35125 1406 aa27.7■■■□□ 2.02
SDHA-220ENST00000617470 AKAP12Q02952 1782 aa27.69■■■□□ 2.02
SDHA-220ENST00000617470 BRD4O60885 1362 aaPredicted RBP27.69■■■□□ 2.02
SDHA-220ENST00000617470 CC2D1BQ5T0F9 858 aaKnown RBP27.68■■■□□ 2.02
SDHA-220ENST00000617470 PNISRQ8TF01 805 aaKnown RBP27.68■■■□□ 2.02
SDHA-220ENST00000617470 AMER1Q5JTC6 1135 aaPredicted RBP27.66■■■□□ 2.02
SDHA-220ENST00000617470 EDC4Q6P2E9 1401 aaKnown RBP27.66■■■□□ 2.02
SDHA-220ENST00000617470 MON2Q7Z3U7 1717 aa27.65■■■□□ 2.02
SDHA-220ENST00000617470 TTC21BQ7Z4L5 1316 aa27.64■■■□□ 2.01
SDHA-220ENST00000617470 LMOD2Q6P5Q4 547 aa27.63■■■□□ 2.01
SDHA-220ENST00000617470 NLRP13Q86W25 1043 aa27.62■■■□□ 2.01
SDHA-220ENST00000617470 CGNL1Q0VF96 1302 aa27.62■■■□□ 2.01
SDHA-220ENST00000617470 NHSL1Q5SYE7 1610 aa27.6■■■□□ 2.01
SDHA-220ENST00000617470 PXDNQ92626 1479 aa27.6■■■□□ 2.01
SDHA-220ENST00000617470 SSH2Q76I76 1423 aa27.59■■■□□ 2.01
SDHA-220ENST00000617470 NME9Q86XW9 330 aa27.59■■■□□ 2.01
SDHA-220ENST00000617470 SOS2Q07890 1332 aaPredicted RBP27.59■■■□□ 2.01
SDHA-220ENST00000617470 NUTM2GQ5VZR2 741 aa27.59■■■□□ 2.01
SDHA-220ENST00000617470 ABTB2Q8N961 1025 aa27.59■■■□□ 2.01
SDHA-220ENST00000617470 NPC1L1Q9UHC9 1359 aa27.58■■■□□ 2.01
SDHA-220ENST00000617470 NRKQ7Z2Y5 1582 aa27.58■■■□□ 2.01
SDHA-220ENST00000617470 TTC21AQ8NDW8 1320 aa27.58■■■□□ 2.01
SDHA-220ENST00000617470 GGNBP2Q9H3C7 697 aa27.57■■■□□ 2
SDHA-220ENST00000617470 PLEKHG5O94827 1062 aa27.57■■■□□ 2
SDHA-220ENST00000617470 AHDC1Q5TGY3 1603 aaPredicted RBP27.57■■■□□ 2
SDHA-220ENST00000617470 FYB1O15117 783 aa27.56■■■□□ 2
SDHA-220ENST00000617470 ZRANB1Q9UGI0 708 aa27.55■■■□□ 2
SDHA-220ENST00000617470 SBNO1A3KN83 1393 aa27.55■■■□□ 2
SDHA-220ENST00000617470 PHLPP1O60346 1717 aa27.54■■■□□ 2
SDHA-220ENST00000617470 TRPM3Q9HCF6 1732 aaPredicted RBP27.54■■■□□ 2
SDHA-220ENST00000617470 ZBED9Q6R2W3 1325 aa27.54■■■□□ 2
SDHA-220ENST00000617470 NLRP6P59044 892 aa27.53■■■□□ 2
SDHA-220ENST00000617470 SPATA31A3Q5VYP0 1347 aa27.53■■■□□ 2
SDHA-220ENST00000617470 TNS3Q68CZ2 1445 aa27.53■■■□□ 2
SDHA-220ENST00000617470 LRRC59Q96AG4 307 aaKnown RBP27.51■■■□□ 2
SDHA-220ENST00000617470 COG3Q96JB2 828 aa27.51■■□□□ 1.99
SDHA-220ENST00000617470 KIF20BQ96Q89 1820 aa27.5■■□□□ 1.99
SDHA-220ENST00000617470 PIK3C2AO00443 1686 aa27.49■■□□□ 1.99
SDHA-220ENST00000617470 NSD2O96028 1365 aa27.48■■□□□ 1.99
SDHA-220ENST00000617470 PPP2R1AP30153 589 aa27.48■■□□□ 1.99
SDHA-220ENST00000617470 MORC1Q86VD1 984 aa27.48■■□□□ 1.99
SDHA-220ENST00000617470 ARHGEF10O15013 1369 aa27.47■■□□□ 1.99
SDHA-220ENST00000617470 HSPA1LP34931 641 aa27.47■■□□□ 1.99
SDHA-220ENST00000617470 TNNT2P45379 298 aaPredicted RBP27.47■■□□□ 1.99
SDHA-220ENST00000617470 COL16A1Q07092 1604 aaPredicted RBP27.46■■□□□ 1.99
SDHA-220ENST00000617470 ALS2Q96Q42 1657 aa27.46■■□□□ 1.99
SDHA-220ENST00000617470 SOX12O15370 315 aa27.46■■□□□ 1.99
SDHA-220ENST00000617470 USP31Q70CQ4 1352 aa27.43■■□□□ 1.98
SDHA-220ENST00000617470 FBXO41Q8TF61 875 aa27.43■■□□□ 1.98
SDHA-220ENST00000617470 CABLES1Q8TDN4 633 aa27.42■■□□□ 1.98
SDHA-220ENST00000617470 OVOS2A0A0J9YW53 1432 aa27.42■■□□□ 1.98
SDHA-220ENST00000617470 OVOS2Q6IE36 1432 aa27.42■■□□□ 1.98
SDHA-220ENST00000617470 HAP1P54257 671 aaPredicted RBP27.39■■□□□ 1.98
SDHA-220ENST00000617470 SUPT16HQ9Y5B9 1047 aaKnown RBP27.39■■□□□ 1.97
SDHA-220ENST00000617470 ANKRD26Q9UPS8 1709 aa27.38■■□□□ 1.97
SDHA-220ENST00000617470 PNPLA6Q8IY17 1366 aa27.38■■□□□ 1.97
SDHA-220ENST00000617470 FBLN1P23142 703 aa27.38■■□□□ 1.97
SDHA-220ENST00000617470 SENP3-EIF4A1A0A087X0R7 540 aa27.36■■□□□ 1.97
SDHA-220ENST00000617470 USP19O94966 1318 aa27.36■■□□□ 1.97
SDHA-220ENST00000617470 INSRP06213 1382 aa27.36■■□□□ 1.97
SDHA-220ENST00000617470 GCP02774 474 aa27.35■■□□□ 1.97
SDHA-220ENST00000617470 MARF1Q9Y4F3 1742 aaKnown RBP27.35■■□□□ 1.97
SDHA-220ENST00000617470 MED1Q15648 1581 aaPredicted RBP27.34■■□□□ 1.97
SDHA-220ENST00000617470 KCNH5Q8NCM2 988 aa27.34■■□□□ 1.97
SDHA-220ENST00000617470 JCADQ9P266 1359 aa27.34■■□□□ 1.97
SDHA-220ENST00000617470 BLMP54132 1417 aaPredicted RBP27.34■■□□□ 1.97
SDHA-220ENST00000617470 ZBTB7CA1YPR0 619 aa27.33■■□□□ 1.97
SDHA-220ENST00000617470 USP54Q70EL1 1684 aa27.33■■□□□ 1.97
SDHA-220ENST00000617470 RRS1Q15050 365 aaKnown RBP27.31■■□□□ 1.96
SDHA-220ENST00000617470 NUTM2BA6NNL0 878 aaPredicted RBP27.31■■□□□ 1.96
SDHA-220ENST00000617470 NUTM2EB1AL46 878 aaPredicted RBP27.31■■□□□ 1.96
SDHA-220ENST00000617470 ZC3H6P61129 1189 aaKnown RBP27.31■■□□□ 1.96
SDHA-220ENST00000617470 NUTM2AQ8IVF1 878 aaPredicted RBP27.31■■□□□ 1.96
SDHA-220ENST00000617470 SLIT3O75094 1523 aa27.31■■□□□ 1.96
SDHA-220ENST00000617470 PPM1GO15355 546 aaPredicted RBP27.29■■□□□ 1.96
SDHA-220ENST00000617470 PHRF1Q9P1Y6 1649 aaKnown RBP27.29■■□□□ 1.96
SDHA-220ENST00000617470 COL22A1Q8NFW1 1626 aaPredicted RBP27.28■■□□□ 1.96
SDHA-220ENST00000617470 ADAMTS8Q9UP79 889 aa27.28■■□□□ 1.96
SDHA-220ENST00000617470 SHPRHQ149N8 1683 aa27.27■■□□□ 1.96
SDHA-220ENST00000617470 SMG6Q86US8 1419 aaKnown RBP27.27■■□□□ 1.96
SDHA-220ENST00000617470 EMILIN1Q9Y6C2 1016 aa27.27■■□□□ 1.96
SDHA-220ENST00000617470 AATKQ6ZMQ8 1374 aa27.26■■□□□ 1.95
SDHA-220ENST00000617470 CRYBG1Q9Y4K1 1723 aa27.26■■□□□ 1.95
SDHA-220ENST00000617470 NFAT5O94916 1531 aa27.26■■□□□ 1.95
SDHA-220ENST00000617470 FKBP8Q14318 412 aa27.26■■□□□ 1.95
SDHA-220ENST00000617470 POLKQ9UBT6 870 aa27.26■■□□□ 1.95
SDHA-220ENST00000617470 MAP3K19Q56UN5 1328 aa27.25■■□□□ 1.95
SDHA-220ENST00000617470 MTHFSP49914 203 aa27.24■■□□□ 1.95
SDHA-220ENST00000617470 ABCA3Q99758 1704 aa27.24■■□□□ 1.95
SDHA-220ENST00000617470 AMPHP49418 695 aa27.24■■□□□ 1.95
SDHA-220ENST00000617470 ADAMTS2O95450 1211 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms