RNA–Protein interactions for RNA: ENST00000617462.4

CPEB1-213, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-213ENST00000617462 CCDC61Q9Y6R9 512 aa18.26■□□□□ 0.51
CPEB1-213ENST00000617462 ERICH6BQ5W0A0 696 aa18.26■□□□□ 0.51
CPEB1-213ENST00000617462 TSHZ2Q9NRE2 1034 aa18.26■□□□□ 0.51
CPEB1-213ENST00000617462 ZNF142P52746 1687 aaPredicted RBP18.25■□□□□ 0.51
CPEB1-213ENST00000617462 GOLGA2Q08379 1002 aa18.25■□□□□ 0.51
CPEB1-213ENST00000617462 NEUROD2Q15784 382 aa18.25■□□□□ 0.51
CPEB1-213ENST00000617462 SLFN5Q08AF3 891 aa18.24■□□□□ 0.51
CPEB1-213ENST00000617462 EDC4Q6P2E9 1401 aaKnown RBP18.24■□□□□ 0.51
CPEB1-213ENST00000617462 CFAP53Q96M91 514 aa18.23■□□□□ 0.51
CPEB1-213ENST00000617462 DIP2AQ14689 1571 aa18.23■□□□□ 0.51
CPEB1-213ENST00000617462 NRKQ7Z2Y5 1582 aa18.23■□□□□ 0.51
CPEB1-213ENST00000617462 U2AF1L5P0DN76 240 aaPredicted RBP18.22■□□□□ 0.51
CPEB1-213ENST00000617462 U2AF1Q01081 240 aaKnown RBP eCLIP18.22■□□□□ 0.51
CPEB1-213ENST00000617462 TRMT2AQ8IZ69 625 aaKnown RBP18.22■□□□□ 0.51
CPEB1-213ENST00000617462 TCP11L2Q8N4U5 519 aa18.22■□□□□ 0.51
CPEB1-213ENST00000617462 PTCH1Q13635 1447 aa18.22■□□□□ 0.51
CPEB1-213ENST00000617462 KCNA6P17658 529 aa18.22■□□□□ 0.51
CPEB1-213ENST00000617462 RUNDC1Q96C34 613 aa18.22■□□□□ 0.51
CPEB1-213ENST00000617462 WWC1Q8IX03 1113 aa18.21■□□□□ 0.51
CPEB1-213ENST00000617462 POLKQ9UBT6 870 aa18.21■□□□□ 0.51
CPEB1-213ENST00000617462 EXOC6Q8TAG9 804 aa18.2■□□□□ 0.5
CPEB1-213ENST00000617462 EMILIN1Q9Y6C2 1016 aa18.2■□□□□ 0.5
CPEB1-213ENST00000617462 PNPLA6Q8IY17 1366 aa18.2■□□□□ 0.5
CPEB1-213ENST00000617462 U2SURPO15042 1029 aaKnown RBP18.19■□□□□ 0.5
CPEB1-213ENST00000617462 RBM33Q96EV2 1170 aaKnown RBP18.19■□□□□ 0.5
CPEB1-213ENST00000617462 ACEP12821 1306 aa18.19■□□□□ 0.5
CPEB1-213ENST00000617462 PPM1GO15355 546 aaPredicted RBP18.19■□□□□ 0.5
CPEB1-213ENST00000617462 SETD1BQ9UPS6 1966 aaKnown RBP18.18■□□□□ 0.5
CPEB1-213ENST00000617462 PLEKHF1Q96S99 279 aa18.18■□□□□ 0.5
CPEB1-213ENST00000617462 C20orf194Q5TEA3 1177 aa18.18■□□□□ 0.5
CPEB1-213ENST00000617462 CHD2O14647 1828 aaKnown RBP18.17■□□□□ 0.5
CPEB1-213ENST00000617462 PMFBP1Q8TBY8 1022 aa18.17■□□□□ 0.5
CPEB1-213ENST00000617462 PHF23Q9BUL5 403 aaPredicted RBP18.17■□□□□ 0.5
CPEB1-213ENST00000617462 RRS1Q15050 365 aaKnown RBP18.16■□□□□ 0.5
CPEB1-213ENST00000617462 PELP1Q8IZL8 1130 aaKnown RBP18.15■□□□□ 0.5
CPEB1-213ENST00000617462 PLEKHG3A1L390 1219 aa18.14■□□□□ 0.5
CPEB1-213ENST00000617462 NALCNQ8IZF0 1738 aa18.14■□□□□ 0.5
CPEB1-213ENST00000617462 USP6P35125 1406 aa18.14■□□□□ 0.49
CPEB1-213ENST00000617462 TTC21BQ7Z4L5 1316 aa18.14■□□□□ 0.49
CPEB1-213ENST00000617462 DIAPH1O60610 1272 aaKnown RBP18.14■□□□□ 0.49
CPEB1-213ENST00000617462 LRRC7Q96NW7 1537 aa18.13■□□□□ 0.49
CPEB1-213ENST00000617462 ANKLE2Q86XL3 938 aa18.13■□□□□ 0.49
CPEB1-213ENST00000617462 E9PSI1 815 aa18.13■□□□□ 0.49
CPEB1-213ENST00000617462 SSH2Q76I76 1423 aa18.12■□□□□ 0.49
CPEB1-213ENST00000617462 COG3Q96JB2 828 aa18.11■□□□□ 0.49
CPEB1-213ENST00000617462 ZNF692Q9BU19 519 aaPredicted RBP18.11■□□□□ 0.49
CPEB1-213ENST00000617462 FMN2Q9NZ56 1722 aa18.11■□□□□ 0.49
CPEB1-213ENST00000617462 BCAR3O75815 825 aa18.11■□□□□ 0.49
CPEB1-213ENST00000617462 CRBNQ96SW2 442 aa18.11■□□□□ 0.49
CPEB1-213ENST00000617462 OVOS2A0A0J9YW53 1432 aa18.1■□□□□ 0.49
CPEB1-213ENST00000617462 OVOS2Q6IE36 1432 aa18.1■□□□□ 0.49
CPEB1-213ENST00000617462 PEAK1Q9H792 1746 aa18.1■□□□□ 0.49
CPEB1-213ENST00000617462 CCDC136Q96JN2 1154 aa18.1■□□□□ 0.49
CPEB1-213ENST00000617462 AATKQ6ZMQ8 1374 aa18.09■□□□□ 0.49
CPEB1-213ENST00000617462 HMOX1P09601 288 aa18.09■□□□□ 0.49
CPEB1-213ENST00000617462 TMPOP42166 694 aaKnown RBP18.09■□□□□ 0.49
CPEB1-213ENST00000617462 TRIM35Q9UPQ4 493 aa18.09■□□□□ 0.49
CPEB1-213ENST00000617462 CDK12Q9NYV4 1490 aaPredicted RBP18.09■□□□□ 0.49
CPEB1-213ENST00000617462 PIK3R4Q99570 1358 aa18.08■□□□□ 0.49
CPEB1-213ENST00000617462 IL13P35225 146 aa18.08■□□□□ 0.49
CPEB1-213ENST00000617462 NGEFQ8N5V2 710 aa18.08■□□□□ 0.49
CPEB1-213ENST00000617462 RSPH6AQ9H0K4 717 aa18.08■□□□□ 0.48
CPEB1-213ENST00000617462 PIK3C2AO00443 1686 aa18.07■□□□□ 0.48
CPEB1-213ENST00000617462 CCDC27Q2M243 656 aa18.07■□□□□ 0.48
CPEB1-213ENST00000617462 SOX12O15370 315 aa18.07■□□□□ 0.48
CPEB1-213ENST00000617462 PHACTR3Q96KR7 559 aa18.07■□□□□ 0.48
CPEB1-213ENST00000617462 NPHP4O75161 1426 aaPredicted RBP18.05■□□□□ 0.48
CPEB1-213ENST00000617462 MARF1Q9Y4F3 1742 aaKnown RBP18.05■□□□□ 0.48
CPEB1-213ENST00000617462 PRKAR2BP31323 418 aa18.05■□□□□ 0.48
CPEB1-213ENST00000617462 WDR63Q8IWG1 891 aa18.05■□□□□ 0.48
CPEB1-213ENST00000617462 TSR2Q969E8 191 aaKnown RBP18.04■□□□□ 0.48
CPEB1-213ENST00000617462 NGDNQ8NEJ9 315 aaKnown RBP18.03■□□□□ 0.48
CPEB1-213ENST00000617462 MAPK8IP3Q9UPT6 1336 aa18.03■□□□□ 0.48
CPEB1-213ENST00000617462 DLG5Q8TDM6 1919 aa18.03■□□□□ 0.48
CPEB1-213ENST00000617462 RIPK4P57078 832 aa18.02■□□□□ 0.48
CPEB1-213ENST00000617462 FCHSD2O94868 740 aa18.02■□□□□ 0.47
CPEB1-213ENST00000617462 ANKARQ7Z5J8 1434 aa18.01■□□□□ 0.47
CPEB1-213ENST00000617462 USP31Q70CQ4 1352 aa18.01■□□□□ 0.47
CPEB1-213ENST00000617462 NUTM2GQ5VZR2 741 aa18.01■□□□□ 0.47
CPEB1-213ENST00000617462 EIF4A2Q14240 407 aaKnown RBP18■□□□□ 0.47
CPEB1-213ENST00000617462 HSP90AB2PQ58FF8 381 aa18■□□□□ 0.47
CPEB1-213ENST00000617462 AEBP1Q8IUX7 1158 aa18■□□□□ 0.47
CPEB1-213ENST00000617462 BCL2L13Q9BXK5 485 aa18■□□□□ 0.47
CPEB1-213ENST00000617462 TNNQ9UQP3 1299 aa18■□□□□ 0.47
CPEB1-213ENST00000617462 FANCIQ9NVI1 1328 aa17.99■□□□□ 0.47
CPEB1-213ENST00000617462 THUMPD2Q9BTF0 503 aaKnown RBP17.99■□□□□ 0.47
CPEB1-213ENST00000617462 SKAP1Q86WV1 359 aa17.99■□□□□ 0.47
CPEB1-213ENST00000617462 RARSP54136 660 aaKnown RBP17.98■□□□□ 0.47
CPEB1-213ENST00000617462 NCBP3Q53F19 620 aaKnown RBP17.98■□□□□ 0.47
CPEB1-213ENST00000617462 RBM19Q9Y4C8 960 aaKnown RBP17.98■□□□□ 0.47
CPEB1-213ENST00000617462 TTC21AQ8NDW8 1320 aa17.97■□□□□ 0.47
CPEB1-213ENST00000617462 ADGRL3Q9HAR2 1447 aa17.97■□□□□ 0.47
CPEB1-213ENST00000617462 RGPD1P0DJD0 1748 aa17.97■□□□□ 0.47
CPEB1-213ENST00000617462 MAP3K19Q56UN5 1328 aa17.97■□□□□ 0.47
CPEB1-213ENST00000617462 STRCP1A6NGW2 1772 aa17.96■□□□□ 0.46
CPEB1-213ENST00000617462 NWD1Q149M9 1564 aa17.95■□□□□ 0.46
CPEB1-213ENST00000617462 EXOSC9Q06265 439 aaKnown RBP17.95■□□□□ 0.46
CPEB1-213ENST00000617462 NFE2L2Q16236 605 aa17.94■□□□□ 0.46
CPEB1-213ENST00000617462 PANK1Q8TE04 598 aa17.94■□□□□ 0.46
CPEB1-213ENST00000617462 MYH16Q9H6N6 1097 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms